• 17662 Citations
  • 69 Scopus h-Index
1992 …2020

Research output per year

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Research Output

2020

Comparison of three commercial tools for metagenomic shotgun sequencing analysis

Thoendel, M., Jeraldo, P., Greenwood-Quaintance, K. E., Yao, J., Chia, N., Hanssen, A. D., Abdel, M. P. & Patel, R., Jan 1 2020, In : Journal of clinical microbiology. 58, 3, e00981-19.

Research output: Contribution to journalArticle

Core genome MLST and resistome analysis of Klebsiella pneumoniae using a clinically amenable workflow

the Antibacterial Resistance Leadership Group, Jan 1 2020, (Accepted/In press) In : Diagnostic Microbiology and Infectious Disease. 114996.

Research output: Contribution to journalArticle

In vitro activity of plazomicin compared to amikacin, gentamicin, and tobramycin against multidrug-resistant aerobic gram-negative bacilli

Fleischmann, W. A., Greenwood-Quaintance, K. E. & Patel, R., Jan 27 2020, In : Antimicrobial Agents and Chemotherapy. 64, 2, e01711.

Research output: Contribution to journalArticle

1 Scopus citations

Molecular Approach to Diagnosis of Cardiovascular Implantable Electronic Device Infection

Esquer Garrigos, Z., Sohail, M. R., Greenwood-Quaintance, K. E., Cunningham, S. A., Vijayvargiya, P., Fida, M., Friedman, P. A., Mandrekar, J., DeSimone, D. C., Baddour, L. M. & Patel, R., Feb 14 2020, In : Clinical infectious diseases : an official publication of the Infectious Diseases Society of America. 70, 5, p. 898-906 9 p.

Research output: Contribution to journalArticle

Topical vancomycin for treatment of methicillin-resistant Staphylococcus epidermidis infection in a rat spinal implant model

Karau, M. J., Zhang, C., Mandrekar, J. N., Kohrs, N. J., Puleo, D. A., van Wijnen, A. J., Patel, R., Boyce, T. G., Larson, A. N. & Milbrandt, T. A., Jan 1 2020, (Accepted/In press) In : Spine Deformity.

Research output: Contribution to journalArticle

2019

A moldy application of MALDI: MALDI-ToF mass spectrometry for fungal identification

Patel, R., Mar 1 2019, In : Journal of Fungi. 5, 1, 4.

Research output: Contribution to journalReview article

Open Access
9 Scopus citations

Application of metagenomic shotgun sequencing to detect vector-borne pathogens in clinical blood samples

Vijayvargiya, P., Jeraldo, P. R., Thoendel, M. J., Greenwood-Quaintance, K. E., Garrigos, Z. E., Rizwan Sohail, M., Chia, N., Pritt, B. S. & Patel, R., Jan 1 2019, In : PloS one. 14, 10, e0222915.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Biological challenges of phage therapy and proposed solutions: a literature review

Caflisch, K. M., Suh, G. A. & Patel, R., Dec 2 2019, In : Expert Review of Anti-Infective Therapy. 17, 12, p. 1011-1041 31 p.

Research output: Contribution to journalReview article

Cobalt and Chromium Ion Release in Metal-on-Polyethylene and Ceramic-on-Polyethylene THA: A Simulator Study With Cellular and Microbiological Correlations

Wyles, C. C., Paradise, C. R., Masters, T. L., Patel, R., van Wijnen, A. J., Abdel, M. P., Trousdale, R. T. & Sierra, R. J., Jan 1 2019, (Accepted/In press) In : Journal of Arthroplasty.

Research output: Contribution to journalArticle

2 Scopus citations

Evaluation of the cosmosid bioinformatics platform for prosthetic joint-associated sonicate fluid shotgun metagenomic data analysis

Yan, Q., Mi Wi, Y., Thoendel, M. J., Raval, Y. S., Greenwood-Quaintance, K. E., Abdel, M., Jeraldo, P. R., Chia, N. D. & Patel, R., Feb 1 2019, In : Journal of Clinical Microbiology. 57, 2, e01182.

Research output: Contribution to journalArticle

4 Scopus citations

Exebacase in Addition to Daptomycin Is More Active than Daptomycin or Exebacase Alone in Methicillin-Resistant Staphylococcus aureus Osteomyelitis in Rats

Karau, M. J., Schmidt-Malan, S. M., Yan, Q., Greenwood-Quaintance, K. E., Mandrekar, J., Lehoux, D., Schuch, R., Cassino, C. & Patel, R., Jan 1 2019, In : Antimicrobial Agents and Chemotherapy. 63, 10, e01235-19.

Research output: Contribution to journalArticle

1 Scopus citations

Hypochlorous-Acid-Generating Electrochemical Scaffold for Treatment of Wound Biofilms

Kiamco, M. M., Zmuda, H. M., Mohamed, A., Call, D. R., Raval, Y. S., Patel, R. & Beyenal, H., Dec 1 2019, In : Scientific reports. 9, 1, 2683.

Research output: Contribution to journalArticle

Open Access
4 Scopus citations

Implications of bacteriophage- And bacteriophage component-based therapies for the clinical microbiology laboratory

Caflisch, K. M. & Patel, R., Jan 1 2019, In : Journal of clinical microbiology. 57, 8, e00229-19.

Research output: Contribution to journalArticle

4 Scopus citations

In vitro activity of rifampin, rifabutin, rifapentine, and rifaximin against planktonic and biofilm states of staphylococci isolated from periprosthetic joint infection

Albano, M., Karau, M. J., Greenwood-Quaintance, K. E., Osmon, D. R., Oravec, C. P., Berry, D. J., Abdel, M. P. & Patel, R., Jan 1 2019, In : Antimicrobial Agents and Chemotherapy. 63, 11, e0095919.

Research output: Contribution to journalArticle

1 Scopus citations

Lack of correlation of virulence gene profiles of Staphylococcus aureus bacteremia isolates with mortality

Park, K. H., Greenwood-Quaintance, K. E., Cunningham, S. A., Rajagopalan, G., Chia, N. D., Jeraldo, P. R., Mandrekar, J. & Patel, R., Aug 1 2019, In : Microbial Pathogenesis. 133, 103543.

Research output: Contribution to journalArticle

1 Scopus citations

Leprosy in a Midwestern Dermatology Clinic: Report of 9 Patients

Bezalel, S. A., Onajin, O., Gonzalez-Santiago, T. M., Patel, R., Pritt, B., Virk, A., Gibson, L. E. & Peters, M. S., Mar 1 2019, In : Mayo Clinic proceedings. 94, 3, p. 417-423 7 p.

Research output: Contribution to journalArticle

3 Scopus citations

Low Ureaplasma Polymerase Chain Reaction Positivity Rate Among Newborns in a Neonatal Intensive Care Unit or Intermediate Special Care Nursery

Madigan, T., Carey, W. A., Kaemingk, B. D. & Patel, R., May 1 2019, In : The Pediatric infectious disease journal. 38, 5, p. e111

Research output: Contribution to journalArticle

Microbiology of polymicrobial prosthetic joint infection

Flurin, L., Greenwood-Quaintance, K. E. & Patel, R., Jan 1 2019, In : Diagnostic Microbiology and Infectious Disease.

Research output: Contribution to journalArticle

1 Scopus citations

Oritavancin polymethylmethacrylate (PMMA)-compressive strength testing and in vitro elution

Schmidt-Malan, S. M., Greenwood-Quaintance, K. E., Berglund, L. J., Mandrekar, J. & Patel, R., Feb 12 2019, In : Journal of orthopaedic surgery and research. 14, 1, 1 p.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations
Open Access
5 Scopus citations

Reply to Fernández and Vazquez

Fang, F. C. & Patel, R., Aug 30 2019, In : Clinical infectious diseases : an official publication of the Infectious Diseases Society of America. 69, 6, p. 1087-1088 2 p.

Research output: Contribution to journalArticle

Reply to Spyridou et al

Strålin, K., Patel, R., Ullberg, M. & Özenci, V., Jan 7 2019, In : Clinical Infectious Diseases. 68, 2, 1 p.

Research output: Contribution to journalLetter

1 Scopus citations

Small intestinal microbial dysbiosis underlies symptoms associated with functional gastrointestinal disorders

Saffouri, G. B., Shields-Cutler, R. R., Chen, J., Yang, Y., Lekatz, H. R., Hale, V. L., Cho, J. M., Battaglioli, E. J., Bhattarai, Y., Thompson, K. J., Kalari, K. K., Behera, G., Berry, J. C., Peters, S. A., Patel, R., Schuetz, A. N., Faith, J. J., Camilleri, M., Sonnenburg, J. L., Farrugia, G. & 4 others, Swann, J. R., Grover, M., Knights, D. & Kashyap, P. C., Dec 1 2019, In : Nature communications. 10, 1, 2012.

Research output: Contribution to journalArticle

Open Access
10 Scopus citations

Sonication culture of antimicrobial agent-containing cement spacers removed during staged revisions for arthroplasty infection

Gomez-Urena, E., Sierra, R. J., Greenwood-Quiantance, K. E., Karau, M. J., Steckelberg, J. M. & Patel, R., Feb 1 2019, In : Journal of Clinical Microbiology. 57, 2, e01483.

Research output: Contribution to journalArticle

The bacterial aetiology of pleural empyema. A descriptive and comparative metagenomic study

Dyrhovden, R., Nygaard, R. M., Patel, R., Ulvestad, E. & Kommedal, Jan 1 2019, (Accepted/In press) In : Clinical Microbiology and Infection.

Research output: Contribution to journalArticle

5 Scopus citations

U.S.-Based national surveillance for fidaxomicin susceptibility of clostridioides difficile-associated diarrheal isolates from 2013 to 2016

Thorpe, C. M., McDermott, L. A., Tran, M. K., Chang, J., Jenkins, S. G., Goldstein, E. J. C., Patel, R., Forbes, B. A., Johnson, S., Gerding, D. N. & Snydman, D. R., Jan 1 2019, In : Antimicrobial Agents and Chemotherapy. 63, 7, e00391-19.

Research output: Contribution to journalArticle

3 Scopus citations

Yersinia kristensenii subsp. rochesterensis subsp. nov., isolated from human feces

Cunningham, S. A., Jeraldo, P. & Patel, R., Aug 1 2019, In : International journal of systematic and evolutionary microbiology. 69, 8, p. 2292-2298 7 p.

Research output: Contribution to journalArticle

2018

Activity of ceftolozane-tazobactam against carbapenem- resistant, non-carbapenemase-producing pseudomonas aeruginosa and associated resistance mechanisms

Wi, Y. M., Greenwood-Quaintance, K. E., Schuetz, A. N., Ko, K. S., Peck, K. R., Song, J. H. & Patel, R., Jan 1 2018, In : Antimicrobial Agents and Chemotherapy. 62, 1, e01970.

Research output: Contribution to journalArticle

11 Scopus citations

Activity of fixed direct electrical current in experimental Staphylococcus aureus foreign-body osteomyelitis

Schmidt-Malan, S. M., Brinkman, C. L., Greenwood-Quaintance, K. E., Karau, M. J., Mandrekar, J. & Patel, R., Jan 1 2018, (Accepted/In press) In : Diagnostic Microbiology and Infectious Disease.

Research output: Contribution to journalArticle

A Guide to Utilization of the Microbiology Laboratory for Diagnosis of Infectious Diseases: 2018 Update by the Infectious Diseases Society of America and the American Society for Microbiology

Miller, J. M., Binnicker, M. J., Campbell, S., Carroll, K. C., Chapin, K. C., Gilligan, P. H., Gonzalez, M. D., Jerris, R. C., Kehl, S. C., Patel, R., Pritt, B., Richter, S. S., Robinson-Dunn, B., Schwartzman, J. D., Snyder, J. W., Telford, S., Theel, E. S., Thomson, R. B., Weinstein, M. P. & Yao, J. D., Aug 31 2018, In : Clinical Infectious Diseases. 67, 6, p. e1-e94

Research output: Contribution to journalArticle

35 Scopus citations

A Guide to Utilization of the Microbiology Laboratory for Diagnosis of Infectious Diseases: 2018 Update by the Infectious Diseases Society of America and the American Society for Microbiology

Miller, J. M., Binnicker, M. J., Campbell, S., Carroll, K. C., Chapin, K. C., Gilligan, P. H., Gonzalez, M. D., Jerris, R. C., Kehl, S. C., Patel, R., Pritt, B., Richter, S. S., Robinson-Dunn, B., Schwartzman, J. D., Snyder, J. W., Telford, S., Theel, E. S., Thomson, R. B., Weinstein, M. P. & Yao, J. D., Aug 31 2018, In : Clinical Infectious Diseases. 67, 6, p. 813-816 4 p.

Research output: Contribution to journalArticle

29 Scopus citations

Antibacterial activity of reduced iron clay against pathogenic bacteria associated with wound infections

Caflisch, K. M., Schmidt-Malan, S. M., Mandrekar, J., Karau, M. J., Nicklas, J. P., Williams, L. B. & Patel, R., Jan 1 2018, (Accepted/In press) In : International Journal of Antimicrobial Agents.

Research output: Contribution to journalArticle

4 Scopus citations

Clinical and laboratory evaluation

Deirmengian, C. A. & Patel, R., Jan 1 2018, Orthopaedic Knowledge Update: Musculoskeletal Infection. Wolters Kluwer Health, p. 57-66 10 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Clinical and molecular correlates of Escherichia coli bloodstream infection from two geographically diverse centers in Rochester, Minnesota, and Singapore

Mendis, S. M., Vasoo, S., Johnston, B. D., Porter, S. B., Cunningham, S. A., Menon, S. R., Teng, C. B., De, P. P., Patel, R., Johnson, J. R. & Banerjee, R., Oct 1 2018, In : Antimicrobial Agents and Chemotherapy. 62, 10, e00937.

Research output: Contribution to journalArticle

4 Scopus citations

Clostridioides difficile uses amino acids associated with gut microbial dysbiosis in a subset of patients with diarrhea

Battaglioli, E. J., Hale, V. L., Chen, J., Jeraldo, P., Ruiz-Mojica, C., Schmidt, B. A., Rekdal, V. M., Till, L. M., Huq, L., Smits, S. A., Moor, W. J., Jones-Hall, Y., Smyrk, T. C., Khanna, S., Pardi, D. S., Grover, M., Patel, R., Chia, N. D., Nelson, H., Sonnenburg, J. L. & 2 others, Farrugia, G. & Kashyap, P. C., Oct 24 2018, In : Science Translational Medicine. 10, 464, eaam7019.

Research output: Contribution to journalArticle

14 Scopus citations

Comparative evaluation of cDNA library construction approaches for RNA-Seq analysis from low RNA-content human specimens

Masters, T. L., Hilker, C. A., Jeraldo, P. R., Bhagwate, A. V., Greenwood-Quaintance, K. E., Eckloff, B. W., Chia, N. D., Hanssen, A. D., Abdel, M., Yao, J. Z., Jen, J. & Patel, R., Nov 1 2018, In : Journal of Microbiological Methods. 154, p. 55-62 8 p.

Research output: Contribution to journalArticle

2 Scopus citations
18 Scopus citations

Dalbavancin is active in vitro against biofilms formed by dalbavancin-susceptible enterococci

Neudorfer, K., Schmidt-Malan, S. M. & Patel, R., Jan 1 2018, In : Diagnostic Microbiology and Infectious Disease. 90, 1, p. 58-63 6 p.

Research output: Contribution to journalArticle

10 Scopus citations

Demise of Polymerase Chain Reaction/Electrospray Ionization-Mass Spectrometry as an Infectious Diseases Diagnostic Tool

Özenci, V., Patel, R., Ullberg, M. & Strålin, K., Jan 18 2018, In : Clinical Infectious Diseases. 66, 3, p. 452-455 4 p.

Research output: Contribution to journalReview article

23 Scopus citations

Diagnostic approach for classic compared with localized whipple disease

Crews, N. R., Cawcutt, K. A., Pritt, B. S., Patel, R. & Virk, A., Jul 1 2018, In : Open Forum Infectious Diseases. 5, 7, ofy136.

Research output: Contribution to journalArticle

3 Scopus citations

Diagnostic methods for prosthetic joint infection in Korea

Park, K. H. & Patel, R., Sep 1 2018, In : Infection and Chemotherapy. 50, 3, p. 199-209 11 p.

Research output: Contribution to journalReview article

1 Scopus citations

Diagnostic modalities

Patel, R., Jan 1 2018, Orthopaedic Knowledge Update: Musculoskeletal Infection. Wolters Kluwer Health, p. 55-56 2 p.

Research output: Chapter in Book/Report/Conference proceedingForeword/postscript

Diagnostic Stewardship: Opportunity for a Laboratory-Infectious Diseases Partnership

Patel, R. & Fang, F. C., Aug 16 2018, In : Clinical Infectious Diseases. 67, 5, p. 799-801 3 p.

Research output: Contribution to journalArticle

11 Scopus citations

Direct detection and identification of prosthetic joint infection pathogens in synovial fluid by metagenomic shotgun sequencing

Ivy, M. I., Thoendel, M. J., Jeraldo, P. R., Greenwood-Quaintance, K. E., Hanssen, A. D., Abdel, M., Chia, N. D., Yao, J. Z., Tande, A. J., Mandrekar, J. & Patel, R., Sep 1 2018, In : Journal of Clinical Microbiology. 56, 9, e00402.

Research output: Contribution to journalArticle

19 Scopus citations

Direct-from-blood-culture disk diffusion to determine antimicrobial susceptibility of gram-negative bacteria: Preliminary report from the clinical and Laboratory Standards Institute Methods Development and Standardization Working Group

Chandrasekaran, S., Abbott, A., Campeau, S., Zimmer, B. L., Weinstein, M., Thrupp, L., Hejna, J., Walker, L., Ammann, T., Kirn, T., Patel, R. & Humphries, R. M., Mar 1 2018, In : Journal of Clinical Microbiology. 56, 3

Research output: Contribution to journalArticle

16 Scopus citations

Eight years of clinical legionella PCR testing illustrates a seasonal pattern

Rucinski, S. L., Murphy, M. P., Kies, K. D., Cunningham, S. A., Schuetz, A. N. & Patel, R., Jul 13 2018, In : Journal of Infectious Diseases. 218, 4, p. 669-670 2 p.

Research output: Contribution to journalLetter

1 Scopus citations

Enterococcus faecalis sex pheromone cCF10 enhances conjugative plasmid transfer in vivo

Hirt, H., Greenwood-Quaintance, K. E., Karau, M. J., Till, L. M., Kashyap, P. C., Patel, R. & Dunny, G. M., Jan 1 2018, In : mBio. 9, 1, e00037-18.

Research output: Contribution to journalArticle

13 Scopus citations

Evaluation of a commercial multiplex molecular panel for diagnosis of infectious meningitis and encephalitis

Liesman, R. M., Strasburg, A. P., Heitman, A. K., Theel, E. S., Patel, R. & Binnicker, M. J., Apr 1 2018, In : Journal of Clinical Microbiology. 56, 4, e01927.

Research output: Contribution to journalArticle

33 Scopus citations