• 16433 Citations
  • 66 Scopus h-Index
1992 …2020
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Research Output 1992 2019

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Article
2019

Evaluation of the cosmosid bioinformatics platform for prosthetic joint-associated sonicate fluid shotgun metagenomic data analysis

Yan, Q., Mi Wi, Y., Thoendel, M. J., Raval, Y. S., Greenwood-Quaintance, K. E., Abdel, M., Jeraldo, P. R., Chia, N. D. & Patel, R., Feb 1 2019, In : Journal of Clinical Microbiology. 57, 2, e01182.

Research output: Contribution to journalArticle

Metagenomics
Firearms
Computational Biology
Joints
Bacterial Drug Resistance

Hypochlorous-Acid-Generating Electrochemical Scaffold for Treatment of Wound Biofilms

Kiamco, M. M., Zmuda, H. M., Mohamed, A., Call, D. R., Raval, Y. S., Patel, R. & Beyenal, H., Dec 1 2019, In : Scientific reports. 9, 1, 2683.

Research output: Contribution to journalArticle

Open Access
Hypochlorous Acid
Biofilms
Wounds and Injuries
Wound Infection
Acinetobacter baumannii

Implications of bacteriophage- And bacteriophage component-based therapies for the clinical microbiology laboratory

Caflisch, K. M. & Patel, R., Jan 1 2019, In : Journal of clinical microbiology. 57, 8, e00229-19.

Research output: Contribution to journalArticle

Microbiology
Bacteriophages
Clinical Medicine
Bacterial Infections
Therapeutics

Lack of correlation of virulence gene profiles of Staphylococcus aureus bacteremia isolates with mortality

Park, K. H., Greenwood-Quaintance, K. E., Cunningham, S. A., Rajagopalan, G., Chia, N. D., Jeraldo, P. R., Mandrekar, J. & Patel, R., Aug 1 2019, In : Microbial Pathogenesis. 133, 103543.

Research output: Contribution to journalArticle

Bacteremia
Virulence
Staphylococcus aureus
Mortality
Superantigens
1 Citation (Scopus)

Leprosy in a Midwestern Dermatology Clinic: Report of 9 Patients

Bezalel, S. A., Onajin, O., Gonzalez-Santiago, T. M., Patel, R., Pritt, B. S., Virk, A., Gibson, L. E. & Peters, M. S., Mar 1 2019, In : Mayo Clinic proceedings. 94, 3, p. 417-423 7 p.

Research output: Contribution to journalArticle

Leprosy
Dermatology
Guam
Oceania
Micronesia

Low Ureaplasma Polymerase Chain Reaction Positivity Rate Among Newborns in a Neonatal Intensive Care Unit or Intermediate Special Care Nursery

Madigan, T., Carey, W. A., Kaemingk, B. D. & Patel, R., May 1 2019, In : The Pediatric infectious disease journal. 38, 5, p. e111

Research output: Contribution to journalArticle

Ureaplasma
Nurseries
Neonatal Intensive Care Units
Polymerase Chain Reaction

Microbiology of polymicrobial prosthetic joint infection

Flurin, L., Greenwood-Quaintance, K. E. & Patel, R., Jan 1 2019, In : Diagnostic Microbiology and Infectious Disease.

Research output: Contribution to journalArticle

Microbiology
Joints
Infection
Coinfection
Staphylococcus epidermidis

Oritavancin polymethylmethacrylate (PMMA)-compressive strength testing and in vitro elution

Schmidt-Malan, S. M., Greenwood-Quaintance, K. E., Berglund, L. J., Mandrekar, J. & Patel, R., Feb 12 2019, In : Journal of orthopaedic surgery and research. 14, 1, 1 p.

Research output: Contribution to journalArticle

Open Access
oritavancin
Compressive Strength
Polymethyl Methacrylate
Vancomycin
Elastic Modulus
1 Citation (Scopus)
Open Access
Molecular Pathology
Pseudomonas aeruginosa
Lactams
Confidence Intervals
Genes
2 Citations (Scopus)

Small intestinal microbial dysbiosis underlies symptoms associated with functional gastrointestinal disorders

Saffouri, G. B., Shields-Cutler, R. R., Chen, J., Yang, Y., Lekatz, H. R., Hale, V. L., Cho, J. M., Battaglioli, E. J., Bhattarai, Y., Thompson, K. J., Kalari, K. R., Behera, G., Berry, J. C., Peters, S. A., Patel, R., Schuetz, A. N., Faith, J. J., Camilleri, M., Sonnenburg, J. L., Farrugia, G. & 4 others, Swann, J. R., Grover, M., Knights, D. & Kashyap, P. C., Dec 1 2019, In : Nature communications. 10, 1, 2012.

Research output: Contribution to journalArticle

Open Access
Dysbiosis
Gastrointestinal Diseases
Nutrition
diets
disorders

Sonication culture of antimicrobial agent-containing cement spacers removed during staged revisions for arthroplasty infection

Gomez-Urena, E., Sierra, R. J., Greenwood-Quiantance, K. E., Karau, M. J., Steckelberg, J. M. & Patel, R., Feb 1 2019, In : Journal of Clinical Microbiology. 57, 2, e01483.

Research output: Contribution to journalArticle

Sonication
Anti-Infective Agents
Arthroplasty
Infection
Replantation

The bacterial aetiology of pleural empyema. A descriptive and comparative metagenomic study

Dyrhovden, R., Nygaard, R. M., Patel, R., Ulvestad, E. & Kommedal, Jan 1 2019, (Accepted/In press) In : Clinical Microbiology and Infection.

Research output: Contribution to journalArticle

Pleural Empyema
Metagenomics
Brain Abscess
Empyema
rRNA Genes

Yersinia kristensenii subsp. rochesterensis subsp. nov., isolated from human feces

Cunningham, S. A., Jeraldo, P. & Patel, R., Aug 1 2019, In : International journal of systematic and evolutionary microbiology. 69, 8, p. 2292-2298 7 p.

Research output: Contribution to journalArticle

Yersinia kristensenii
Yersinia
Proteobacteria
proteomics
new subspecies
2018
4 Citations (Scopus)

Activity of ceftolozane-tazobactam against carbapenem- resistant, non-carbapenemase-producing pseudomonas aeruginosa and associated resistance mechanisms

Wi, Y. M., Greenwood-Quaintance, K. E., Schuetz, A. N., Ko, K. S., Peck, K. R., Song, J. H. & Patel, R., Jan 1 2018, In : Antimicrobial Agents and Chemotherapy. 62, 1, e01970.

Research output: Contribution to journalArticle

Carbapenems
Pseudomonas aeruginosa
meropenem
Pseudomonas Infections
Polymerase Chain Reaction

Activity of fixed direct electrical current in experimental Staphylococcus aureus foreign-body osteomyelitis

Schmidt-Malan, S. M., Brinkman, C. L., Greenwood-Quaintance, K. E., Karau, M. J., Mandrekar, J. & Patel, R., Jan 1 2018, (Accepted/In press) In : Diagnostic Microbiology and Infectious Disease.

Research output: Contribution to journalArticle

Ceftriaxone
Osteomyelitis
Foreign Bodies
Staphylococcus aureus
Bacteria
14 Citations (Scopus)

A Guide to Utilization of the Microbiology Laboratory for Diagnosis of Infectious Diseases: 2018 Update by the Infectious Diseases Society of America and the American Society for Microbiology

Miller, J. M., Binnicker, M. J., Campbell, S., Carroll, K. C., Chapin, K. C., Gilligan, P. H., Gonzalez, M. D., Jerris, R. C., Kehl, S. C., Patel, R., Pritt, B. S., Richter, S. S., Robinson-Dunn, B., Schwartzman, J. D., Snyder, J. W., Telford, S., Theel, E. S., Thomson, R. B., Weinstein, M. P. & Yao, J. D., Aug 31 2018, In : Clinical Infectious Diseases. 67, 6, p. 813-816 4 p.

Research output: Contribution to journalArticle

Clinical Laboratory Techniques
Microbiology
Communicable Diseases
Soft Tissue Infections
Cardiovascular Infections
17 Citations (Scopus)

A Guide to Utilization of the Microbiology Laboratory for Diagnosis of Infectious Diseases: 2018 Update by the Infectious Diseases Society of America and the American Society for Microbiology

Miller, J. M., Binnicker, M. J., Campbell, S., Carroll, K. C., Chapin, K. C., Gilligan, P. H., Gonzalez, M. D., Jerris, R. C., Kehl, S. C., Patel, R., Pritt, B. S., Richter, S. S., Robinson-Dunn, B., Schwartzman, J. D., Snyder, J. W., Telford, S., Theel, E. S., Thomson, R. B., Weinstein, M. P. & Yao, J. D., Aug 31 2018, In : Clinical Infectious Diseases. 67, 6, p. e1-e94

Research output: Contribution to journalArticle

Clinical Laboratory Techniques
Microbiology
Communicable Diseases
Soft Tissue Infections
Cardiovascular Infections
1 Citation (Scopus)

Antibacterial activity of reduced iron clay against pathogenic bacteria associated with wound infections

Caflisch, K. M., Schmidt-Malan, S. M., Mandrekar, J., Karau, M. J., Nicklas, J. P., Williams, L. B. & Patel, R., Jan 1 2018, (Accepted/In press) In : International Journal of Antimicrobial Agents.

Research output: Contribution to journalArticle

Wound Infection
Iron
Bacteria
Biofilms
Staphylococcus aureus
3 Citations (Scopus)

Clinical and molecular correlates of Escherichia coli bloodstream infection from two geographically diverse centers in Rochester, Minnesota, and Singapore

Mendis, S. M., Vasoo, S., Johnston, B. D., Porter, S. B., Cunningham, S. A., Menon, S. R., Teng, C. B., De, P. P., Patel, R., Johnson, J. R. & Banerjee, R., Oct 1 2018, In : Antimicrobial Agents and Chemotherapy. 62, 10, e00937.

Research output: Contribution to journalArticle

Escherichia coli Infections
Singapore
Bacteremia
Escherichia coli
Virulence
6 Citations (Scopus)

Clostridioides difficile uses amino acids associated with gut microbial dysbiosis in a subset of patients with diarrhea

Battaglioli, E. J., Hale, V. L., Chen, J., Jeraldo, P., Ruiz-Mojica, C., Schmidt, B. A., Rekdal, V. M., Till, L. M., Huq, L., Smits, S. A., Moor, W. J., Jones-Hall, Y., Smyrk, T. C., Khanna, S., Pardi, D. S., Grover, M., Patel, R., Chia, N. D., Nelson, H., Sonnenburg, J. L. & 2 others, Farrugia, G. & Kashyap, P. C., Oct 24 2018, In : Science Translational Medicine. 10, 464, eaam7019.

Research output: Contribution to journalArticle

Dysbiosis
Diarrhea
Amino Acids
Infection
Proline
1 Citation (Scopus)

Comparative evaluation of cDNA library construction approaches for RNA-Seq analysis from low RNA-content human specimens

Masters, T. L., Hilker, C. A., Jeraldo, P. R., Bhagwate, A. V., Greenwood-Quaintance, K. E., Eckloff, B. W., Chia, N. D., Hanssen, A. D., Abdel, M., Yao, J. Z., Jen, J. & Patel, R., Nov 1 2018, In : Journal of Microbiological Methods. 154, p. 55-62 8 p.

Research output: Contribution to journalArticle

Gene Library
RNA
RNA Sequence Analysis
Synovial Fluid
Transcriptome
11 Citations (Scopus)
Sonication
Prostheses and Implants
Communicable Diseases
Joints
Infection
5 Citations (Scopus)

Dalbavancin is active in vitro against biofilms formed by dalbavancin-susceptible enterococci

Neudorfer, K., Schmidt-Malan, S. M. & Patel, R., Jan 1 2018, In : Diagnostic Microbiology and Infectious Disease. 90, 1, p. 58-63 6 p.

Research output: Contribution to journalArticle

Daptomycin
Enterococcus
Vancomycin
Biofilms
Enterococcus faecium

Diagnostic approach for classic compared with localized whipple disease

Crews, N. R., Cawcutt, K. A., Pritt, B. S., Patel, R. & Virk, A., Jul 1 2018, In : Open Forum Infectious Diseases. 5, 7, ofy136.

Research output: Contribution to journalArticle

Whipple Disease
Arthritis
Periodic Acid
Central Nervous System Diseases
Tropheryma
2 Citations (Scopus)

Diagnostic Stewardship: Opportunity for a Laboratory-Infectious Diseases Partnership

Patel, R. & Fang, F. C., Aug 16 2018, In : Clinical Infectious Diseases. 67, 5, p. 799-801 3 p.

Research output: Contribution to journalArticle

Communicable Diseases
Anti-Infective Agents
Pharmacists
Routine Diagnostic Tests
Infection
8 Citations (Scopus)

Direct detection and identification of prosthetic joint infection pathogens in synovial fluid by metagenomic shotgun sequencing

Ivy, M. I., Thoendel, M. J., Jeraldo, P. R., Greenwood-Quaintance, K. E., Hanssen, A. D., Abdel, M., Chia, N. D., Yao, J. Z., Tande, A. J., Mandrekar, J. & Patel, R., Sep 1 2018, In : Journal of Clinical Microbiology. 56, 9, e00402.

Research output: Contribution to journalArticle

Metagenomics
Synovial Fluid
Firearms
Joints
Infection
11 Citations (Scopus)

Direct-from-blood-culture disk diffusion to determine antimicrobial susceptibility of gram-negative bacteria: Preliminary report from the clinical and Laboratory Standards Institute Methods Development and Standardization Working Group

Chandrasekaran, S., Abbott, A., Campeau, S., Zimmer, B. L., Weinstein, M., Thrupp, L., Hejna, J., Walker, L., Ammann, T., Kirn, T., Patel, R. & Humphries, R. M., Mar 1 2018, In : Journal of Clinical Microbiology. 56, 3

Research output: Contribution to journalArticle

Gram-Negative Bacteria
Reading
Blood Culture
Acinetobacter baumannii
Enterobacteriaceae
7 Citations (Scopus)

Enterococcus faecalis sex pheromone cCF10 enhances conjugative plasmid transfer in vivo

Hirt, H., Greenwood-Quaintance, K. E., Karau, M. J., Till, L. M., Kashyap, P. C., Patel, R. & Dunny, G. M., Jan 1 2018, In : mBio. 9, 1, e00037-18.

Research output: Contribution to journalArticle

Sex Attractants
Enterococcus faecalis
Plasmids
Pheromones
Bacteriocins
20 Citations (Scopus)

Evaluation of a commercial multiplex molecular panel for diagnosis of infectious meningitis and encephalitis

Liesman, R. M., Strasburg, A. P., Heitman, A. K., Theel, E. S., Patel, R. & Binnicker, M. J., Apr 1 2018, In : Journal of Clinical Microbiology. 56, 4, e01927.

Research output: Contribution to journalArticle

Encephalitis
Meningitis
Cryptococcus neoformans
Cerebrospinal Fluid
Central Nervous System Infections
3 Citations (Scopus)
Linezolid
oritavancin
Rifampin
Methicillin-Resistant Staphylococcus aureus
Biofilms

General Assembly, Prevention, Operating Room - Personnel: Proceedings of International Consensus on Orthopedic Infections

Baldini, A., Blevins, K., Del Gaizo, D., Enke, O., Goswami, K., Griffin, W., Indelli, P. F., Jennison, T., Kenanidis, E., Manner, P., Patel, R., Puhto, T., Sancheti, P., Sharma, R., Sharma, R., Shetty, R., Sorial, R., Talati, N., Tarity, T. D., Tetsworth, K. & 4 others, Topalis, C., Tsiridis, E., W-Dahl, A. & Wilson, M., Jan 1 2018, (Accepted/In press) In : Journal of Arthroplasty.

Research output: Contribution to journalArticle

Operating Rooms
Orthopedics
Infection
11 Citations (Scopus)

Global spread of three multidrug-resistant lineages of Staphylococcus epidermidis

Lee, J. Y. H., Monk, I. R., Gonçalves da Silva, A., Seemann, T., Chua, K. Y. L., Kearns, A., Hill, R., Woodford, N., Bartels, M. D., Strommenger, B., Laurent, F., Dodémont, M., Deplano, A., Patel, R., Larsen, A. R., Korman, T. M., Stinear, T. P. & Howden, B. P., Oct 1 2018, In : Nature Microbiology. 3, 10, p. 1175-1185 11 p.

Research output: Contribution to journalArticle

Staphylococcus epidermidis
Rifampin
Mutation
Anti-Bacterial Agents
Teicoplanin
11 Citations (Scopus)

Identification of prosthetic joint infection pathogens using a shotgun metagenomics approach

Thoendel, M. J., Jeraldo, P. R., Greenwood-Quaintance, K. E., Yao, J. Z., Chia, N. D., Hanssen, A. D., Abdel, M. & Patel, R., Oct 15 2018, In : Clinical Infectious Diseases. 67, 9, p. 1333-1338 6 p.

Research output: Contribution to journalArticle

Metagenomics
Firearms
Joints
Infection
Knee Replacement Arthroplasties
2 Citations (Scopus)

In vitro activity of imipenem-relebactam and ceftolozane-tazobactam against resistant gram-negative bacilli

Schmidt-Malan, S. M., Mishra, A. J., Mushtaq, A., Brinkman, C. L. & Patel, R., Aug 1 2018, In : Antimicrobial Agents and Chemotherapy. 62, 8, p. 1DUMMY e00533-18.

Research output: Contribution to journalArticle

Imipenem
Bacillus
meropenem
Lactams
Inosine Monophosphate
2 Citations (Scopus)

In vitro activity of oritavancin against biofilms of staphylococci isolated from prosthetic joint infection

Yan, Q., Karau, M. J. & Patel, R., Jan 1 2018, (Accepted/In press) In : Diagnostic Microbiology and Infectious Disease.

Research output: Contribution to journalArticle

oritavancin
Methicillin Resistance
Biofilms
Staphylococcus
Methicillin
oritavancin
Vancomycin
Biofilms
Enterococcus
Vancomycin-Resistant Enterococci
1 Citation (Scopus)
oritavancin
Methicillin Resistance
Staphylococcus epidermidis
Rifampin
Biofilms
26 Citations (Scopus)

Multicenter evaluation of the accelerate PhenoTest BC kit for rapid identification and phenotypic antimicrobial susceptibility testing using morphokinetic cellular analysis

Pancholi, P., Carroll, K. C., Buchan, B. W., Chan, R. C., Dhiman, N., Ford, B., Granato, P. A., Harrington, A. T., Hernandez, D. R., Humphries, R. M., Jindra, M. R., Ledeboer, N. A., Miller, S. A., Brian Mochon, A., Morgan, M. A., Patel, R., Schreckenberger, P. C., Stamper, P. D., Simner, P. J., Tucci, N. E. & 2 others, Zimmerman, C. & Wolk, D. M., Apr 1 2018, In : Journal of Clinical Microbiology. 56, 4, e01329.

Research output: Contribution to journalArticle

Methicillin-Resistant Staphylococcus aureus
Gram-Positive Cocci
Clindamycin
Microbial Drug Resistance
Staphylococcus

Real-Time PCR Assay for Detection of Kingella kingae in Children

Madigan, T., Cunningham, S. A., Ramanan, P., Bhatti, M. M. & Patel, R., Apr 11 2018, (Accepted/In press) In : Journal of Pediatric Infectious Diseases.

Research output: Contribution to journalArticle

Kingella kingae
Real-Time Polymerase Chain Reaction
Infectious Arthritis
Synovial Fluid
Stem Cells
5 Citations (Scopus)

Rifampicin resistance in Staphylococcus epidermidis: molecular characterisation and fitness cost of rpoB mutations

Wi, Y. M., Greenwood-Quaintance, K. E., Brinkman, C. L., Lee, J. Y. H., Howden, B. P. & Patel, R., Jan 1 2018, (Accepted/In press) In : International Journal of Antimicrobial Agents.

Research output: Contribution to journalArticle

Staphylococcus epidermidis
Rifampin
Costs and Cost Analysis
Mutation
Amino Acid Substitution
1 Citation (Scopus)

Role of prolonged blood culture incubation in infective endocarditis diagnosis

Fida, M., Dylla, B. L., Sohail, M. R., Pritt, B. S., Schuetz, A. N. & Patel, R., Jan 1 2018, (Accepted/In press) In : European Journal of Clinical Microbiology and Infectious Diseases.

Research output: Contribution to journalArticle

Endocarditis
Blood Culture
7 Citations (Scopus)

Routine use of MALDI-TOF MS for anaerobic bacterial identification in clinical microbiology

Shannon, S., Kronemann, D., Patel, R. & Schuetz, A. N., Dec 1 2018, In : Anaerobe. 54, p. 191-196 6 p.

Research output: Contribution to journalArticle

Matrix-Assisted Laser Desorption-Ionization Mass Spectrometry
Microbiology
Anaerobic Bacteria
16S Ribosomal RNA
rRNA Genes
2 Citations (Scopus)

Survival of staphylococcus epidermidis in fibroblasts and osteoblasts

Perez, K. & Patel, R., Oct 1 2018, In : Infection and Immunity. 86, 10, e00237-18.

Research output: Contribution to journalArticle

Staphylococcus epidermidis
Osteoblasts
Fibroblasts
Survival
Infection
Biofilms
Equipment and Supplies
Anti-Infective Agents
Infection
Immune System
1 Citation (Scopus)

Whole-genome sequencing for methicillin-resistant Staphylococcus aureus (MRSA) outbreak investigation in a neonatal intensive care unit

Madigan, T., Cunningham, S. A., Patel, R., Greenwood-Quaintance, K. E., Barth, J. E., Sampathkumar, P., Cole, N. C., Kohner, P. C., Colby, C. E., Asay, G. F., Fang, J. L., Baker, C. A., Heinrich, A. L., Fjerstad, K. A., Lujero, M. J., Chia, N. D., Jeraldo, P. R., Nelson, H. & Huskins, W. C., Jan 1 2018, (Accepted/In press) In : Infection Control and Hospital Epidemiology.

Research output: Contribution to journalArticle

Neonatal Intensive Care Units
Methicillin-Resistant Staphylococcus aureus
Disease Outbreaks
Genome
Pulsed Field Gel Electrophoresis
2017

A 79-year-old man with chronic aspiration and an 18F-fluorodeoxyglucose-positron emission tomography/computerized tomography positive lung mass

Ramanan, P., Qureshi, A. S., Martin, S. A., Zea, D., Patel, R. & Pritt, B. S., 2017, In : Open Forum Infectious Diseases. 4, 1, ofw256.

Research output: Contribution to journalArticle

3 Citations (Scopus)

Activity of electrical current in experimental Propionibacterium acnes foreign-body osteomyelitis

Schmidt-Malan, S. M., Brinkman, C. L., Greenwood-Quaintance, K. E., Karau, M. J., Mandrekar, J. & Patel, R., Feb 1 2017, In : Antimicrobial Agents and Chemotherapy. 61, 2, e01863.

Research output: Contribution to journalArticle

Propionibacterium acnes
Ceftriaxone
Osteomyelitis
Foreign Bodies
Biofilms
6 Citations (Scopus)

Activity of tedizolid in methicillin-resistant Staphylococcus epidermidis experimental foreign body-associated osteomyelitis

Park, K. H., Greenwood-Quaintance, K. E., Schuetz, A. N., Mandrekar, J. & Patel, R., Feb 1 2017, In : Antimicrobial Agents and Chemotherapy. 61, 2, e01644.

Research output: Contribution to journalArticle

Methicillin Resistance
Staphylococcus epidermidis
Osteomyelitis
Rifampin
Foreign Bodies
10 Citations (Scopus)

Advancing diagnostics to address antibacterial resistance: The diagnostics and devices committee of the Antibacterial Resistance Leadership Group

Tsalik, E. L., Petzold, E., Kreiswirth, B. N., Bonomo, R. A., Banerjee, R., Lautenbach, E., Evans, S. R., Hanson, K. E., Klausner, J. D., Patel, R., Caliendo, A., Chiu, C., Humphries, R., Miller, M. & Woods, C., 2017, In : Clinical Infectious Diseases. 64, p. S41-S47

Research output: Contribution to journalArticle

Communicable Diseases
Equipment and Supplies
16 Citations (Scopus)

A Novel Prosthetic Joint Infection Pathogen, Mycoplasma salivarium, Identified by Metagenomic Shotgun Sequencing

Thoendel, M., Jeraldo, P., Greenwood-Quaintance, K. E., Chia, N. D., Abdel, M., Steckelberg, J. M., Osmon, D. R. & Patel, R., Jul 15 2017, In : Clinical Infectious Diseases. 65, 2, p. 332-335 4 p.

Research output: Contribution to journalArticle

Mycoplasma salivarium
Metagenomics
Firearms
Joints
Agammaglobulinemia