TY - JOUR
T1 - Recurrent 8q13.2-13.3 microdeletions associated with Branchio-oto-renal syndrome are mediated by human endogenous retroviral (HERV) sequence blocks
AU - Chen, Xiaoli
AU - Wang, Jun
AU - Mitchell, Elyse
AU - Guo, Jin
AU - Wang, Liwen
AU - Zhang, Yu
AU - Hodge, Jennelle C.
AU - Shen, Yiping
N1 - Publisher Copyright:
© 2014 Chen et al.; licensee BioMed Central Ltd.
PY - 2014/8/19
Y1 - 2014/8/19
N2 - Background: Human endogenous retroviral (HERV) sequences are the remnants of ancient retroviral infection and comprise approximately 8% of the human genome. The high abundance and interspersed nature of homologous HERV sequences make them ideal substrates for genomic rearrangements. A role for HERV sequences in mediating human disease-associated rearrangement has been reported but is likely currently underappreciated. Methods and Results: In the present study, two independent de novo 8q13.2-13.3 microdeletion events were identified in patients with clinical features of Branchio-Oto-Renal (BOR) syndrome. Nucleotide-level mapping demonstrated the identical breakpoints, suggesting a recurrent microdeletion including multiple genes such as EYA1, SULF1, and SLCO5A1, which is mediated by HERV1 homologous sequences. Conclusions: These findings raise the potential that HERV sequences may more commonly underlie recombination of dosage sensitive regions associated with recurrent syndromes.
AB - Background: Human endogenous retroviral (HERV) sequences are the remnants of ancient retroviral infection and comprise approximately 8% of the human genome. The high abundance and interspersed nature of homologous HERV sequences make them ideal substrates for genomic rearrangements. A role for HERV sequences in mediating human disease-associated rearrangement has been reported but is likely currently underappreciated. Methods and Results: In the present study, two independent de novo 8q13.2-13.3 microdeletion events were identified in patients with clinical features of Branchio-Oto-Renal (BOR) syndrome. Nucleotide-level mapping demonstrated the identical breakpoints, suggesting a recurrent microdeletion including multiple genes such as EYA1, SULF1, and SLCO5A1, which is mediated by HERV1 homologous sequences. Conclusions: These findings raise the potential that HERV sequences may more commonly underlie recombination of dosage sensitive regions associated with recurrent syndromes.
KW - Branchio-oto-renal syndrome
KW - De novo 8q13.2-13.3 microdeletion
KW - Human endogenous retroviral (HERV) sequences
KW - Mesomelia-synostoses syndrome
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U2 - 10.1186/s12881-014-0090-9
DO - 10.1186/s12881-014-0090-9
M3 - Article
C2 - 25135225
AN - SCOPUS:84906827595
SN - 1755-8794
VL - 15
JO - BMC Medical Genetics
JF - BMC Medical Genetics
IS - 1
M1 - 90
ER -