Magnification generalization for histopathology image embedding

Milad Sikaroudi, Benyamin Ghojogh, Fakhri Karray, Mark Crowley, H. R. Tizhoosh

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Abstract

Histopathology image embedding is an active research area in computer vision. Most of the embedding models exclusively concentrate on a specific magnification level. However, a useful task in histopathology embedding is to train an embedding space regardless of the magnification level. Two main approaches for tackling this goal are domain adaptation and domain generalization, where the target magnification levels may or may not be introduced to the model in training, respectively. Although magnification adaptation is a well-studied topic in the literature, this paper, to the best of our knowledge, is the first work on magnification generalization for histopathology image embedding. We use an episodic trainable domain generalization technique for magnification generalization, namely Model Agnostic Learning of Semantic Features (MASF), which works based on the Model Agnostic Meta-Learning (MAML) concept. Our experimental results on a breast cancer histopathology dataset with four different magnification levels show the proposed method's effectiveness for magnification generalization.

Original languageEnglish (US)
Title of host publication2021 IEEE 18th International Symposium on Biomedical Imaging, ISBI 2021
PublisherIEEE Computer Society
Pages1864-1868
Number of pages5
ISBN (Electronic)9781665412469
DOIs
StatePublished - Apr 13 2021
Event18th IEEE International Symposium on Biomedical Imaging, ISBI 2021 - Nice, France
Duration: Apr 13 2021Apr 16 2021

Publication series

NameProceedings - International Symposium on Biomedical Imaging
Volume2021-April
ISSN (Print)1945-7928
ISSN (Electronic)1945-8452

Conference

Conference18th IEEE International Symposium on Biomedical Imaging, ISBI 2021
Country/TerritoryFrance
CityNice
Period4/13/214/16/21

Keywords

  • Domain generalization
  • Histopathology
  • Magnification
  • Model agnostic
  • Semantic features

ASJC Scopus subject areas

  • Biomedical Engineering
  • Radiology Nuclear Medicine and imaging

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