Data on whole genome sequencing of extrapulmonary tuberculosis clinical isolates from India

Jayshree Advani, Kusum Sharma, Renu Verma, Oishi Chatterjee, Hitendra S. Solanki, Aman Sharma, Subhash Varma, Manish Modi, Pallab Ray, Megha Sharma, M. S. Dhillion, Akhilesh Pandey, Harsha Gowda, T. S.Keshava Prasad

Research output: Contribution to journalArticle

Abstract

This article describes the whole genome sequencing data from 5 extrapulmonary tuberculosis clinical isolates. The whole genome sequencing was carried out on Illumina MiSeq platform to identify single nucleotide variations (SNVs) associated with drug resistance. A total of 214 SNVs in the coding and promoter regions were identified in the whole genome sequencing analysis. Among the identified SNVs, 18 SNVs were identified in genes known to be associated with first and second line drug resistance. The data is related to the research article “Whole genome sequencing of Mycobacterium tuberculosis isolates from extrapulmonary sites” (Sharma et al., 2017) [1].

Original languageEnglish (US)
Pages (from-to)617-622
Number of pages6
JournalData in Brief
Volume20
DOIs
StatePublished - Oct 1 2018
Externally publishedYes

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India
Tuberculosis
Nucleotides
Genome
Drug Resistance
Mycobacterium tuberculosis
Genetic Promoter Regions
Research
Genes

ASJC Scopus subject areas

  • General

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Advani, J., Sharma, K., Verma, R., Chatterjee, O., Solanki, H. S., Sharma, A., ... Prasad, T. S. K. (2018). Data on whole genome sequencing of extrapulmonary tuberculosis clinical isolates from India. Data in Brief, 20, 617-622. https://doi.org/10.1016/j.dib.2018.08.048

Data on whole genome sequencing of extrapulmonary tuberculosis clinical isolates from India. / Advani, Jayshree; Sharma, Kusum; Verma, Renu; Chatterjee, Oishi; Solanki, Hitendra S.; Sharma, Aman; Varma, Subhash; Modi, Manish; Ray, Pallab; Sharma, Megha; Dhillion, M. S.; Pandey, Akhilesh; Gowda, Harsha; Prasad, T. S.Keshava.

In: Data in Brief, Vol. 20, 01.10.2018, p. 617-622.

Research output: Contribution to journalArticle

Advani, J, Sharma, K, Verma, R, Chatterjee, O, Solanki, HS, Sharma, A, Varma, S, Modi, M, Ray, P, Sharma, M, Dhillion, MS, Pandey, A, Gowda, H & Prasad, TSK 2018, 'Data on whole genome sequencing of extrapulmonary tuberculosis clinical isolates from India', Data in Brief, vol. 20, pp. 617-622. https://doi.org/10.1016/j.dib.2018.08.048
Advani J, Sharma K, Verma R, Chatterjee O, Solanki HS, Sharma A et al. Data on whole genome sequencing of extrapulmonary tuberculosis clinical isolates from India. Data in Brief. 2018 Oct 1;20:617-622. https://doi.org/10.1016/j.dib.2018.08.048
Advani, Jayshree ; Sharma, Kusum ; Verma, Renu ; Chatterjee, Oishi ; Solanki, Hitendra S. ; Sharma, Aman ; Varma, Subhash ; Modi, Manish ; Ray, Pallab ; Sharma, Megha ; Dhillion, M. S. ; Pandey, Akhilesh ; Gowda, Harsha ; Prasad, T. S.Keshava. / Data on whole genome sequencing of extrapulmonary tuberculosis clinical isolates from India. In: Data in Brief. 2018 ; Vol. 20. pp. 617-622.
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