Colon fold contour estimation for 3D visualization of colon structure from 2D colonoscopy images

Dongho Hong, Wallapak Tavanapong, Johnny Wong, Junghwan Oh, Piet C. De Groen

Research output: Chapter in Book/Report/Conference proceedingConference contribution

5 Citations (Scopus)

Abstract

This paper presents a novel colon fold contour estimation technique, a crucial step toward fully-automated reconstruction of a 3D colon segment from an image captured from colonoscopy for automated labeling of unseen mucosa areas (where polyps or abnormal lesions may reside) during colonoscopy. The endoscopist can then manipulate the endoscope to inspect these unseen areas. The proposed technique estimates colon fold contours taking advantage of both computer graphics and image processing. The algorithm detects edges of the colon folds, filters noise edges, pairs edges from the same colon fold, and finally completes the contours. The completed colon fold contours and pixel properties around the contours are used to reconstruct a 3D virtual colon segment. We evaluate recall and precision of the algorithm and similarity between algorithm estimated fold contours and manually drawn fold contours.

Original languageEnglish (US)
Title of host publicationProceedings - International Symposium on Biomedical Imaging
Pages121-124
Number of pages4
DOIs
StatePublished - 2011
Event2011 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI'11 - Chicago, IL, United States
Duration: Mar 30 2011Apr 2 2011

Other

Other2011 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI'11
CountryUnited States
CityChicago, IL
Period3/30/114/2/11

Fingerprint

Colonoscopy
Colon
Visualization
Endoscopy
Computer graphics
Labeling
Image processing
Pixels
Computer Graphics
Endoscopes
Polyps
Noise
Mucous Membrane

Keywords

  • 3D reconstruction
  • 3D Visualization
  • colon structure
  • Colonocopy
  • image processing

ASJC Scopus subject areas

  • Biomedical Engineering
  • Radiology Nuclear Medicine and imaging

Cite this

Hong, D., Tavanapong, W., Wong, J., Oh, J., & De Groen, P. C. (2011). Colon fold contour estimation for 3D visualization of colon structure from 2D colonoscopy images. In Proceedings - International Symposium on Biomedical Imaging (pp. 121-124). [5872369] https://doi.org/10.1109/ISBI.2011.5872369

Colon fold contour estimation for 3D visualization of colon structure from 2D colonoscopy images. / Hong, Dongho; Tavanapong, Wallapak; Wong, Johnny; Oh, Junghwan; De Groen, Piet C.

Proceedings - International Symposium on Biomedical Imaging. 2011. p. 121-124 5872369.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Hong, D, Tavanapong, W, Wong, J, Oh, J & De Groen, PC 2011, Colon fold contour estimation for 3D visualization of colon structure from 2D colonoscopy images. in Proceedings - International Symposium on Biomedical Imaging., 5872369, pp. 121-124, 2011 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI'11, Chicago, IL, United States, 3/30/11. https://doi.org/10.1109/ISBI.2011.5872369
Hong D, Tavanapong W, Wong J, Oh J, De Groen PC. Colon fold contour estimation for 3D visualization of colon structure from 2D colonoscopy images. In Proceedings - International Symposium on Biomedical Imaging. 2011. p. 121-124. 5872369 https://doi.org/10.1109/ISBI.2011.5872369
Hong, Dongho ; Tavanapong, Wallapak ; Wong, Johnny ; Oh, Junghwan ; De Groen, Piet C. / Colon fold contour estimation for 3D visualization of colon structure from 2D colonoscopy images. Proceedings - International Symposium on Biomedical Imaging. 2011. pp. 121-124
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