Huihuang D Yan, PhD

Assistant Professor

  • 1289 Citations
  • 20 h-Index
19972019
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Genome Medicine & Life Sciences
Centromere Medicine & Life Sciences
centromeres Agriculture & Biology
rice Agriculture & Biology
Chromatin Immunoprecipitation Medicine & Life Sciences
Chromosomes Medicine & Life Sciences
Bacterial Artificial Chromosomes Medicine & Life Sciences
chromosomes Agriculture & Biology

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Research Output 1997 2019

  • 1289 Citations
  • 20 h-Index
  • 45 Article
  • 1 Conference contribution
  • 1 Review article

Enhanced and controlled chromatin extraction from FFPE tissues and the application to ChIP-seq

Zhong, J., Ye, Z., Clark, C. R., Lenz, S. W., Nguyen, J. H., Yan, H. D., Robertson, K. D., Farrugia, G., Zhang, Z., Ordog, T. & Lee, J. H., Mar 29 2019, In : BMC genomics. 20, 1, 249.

Research output: Contribution to journalArticle

Paraffin
Formaldehyde
Chromatin
Epigenomics
Temperature

Identification of factors associated with duplicate rate in ChIP-seq data

Tian, S., Peng, S., Kalmbach, M., Gaonkar, K. S., Bhagwate, A., Ding, W. D., Eckel-Passow, J. E., Yan, H. D. & Slager, S. L., Apr 1 2019, In : PloS one. 14, 4, e0214723.

Research output: Contribution to journalArticle

Open Access
Chromatin Immunoprecipitation
Polymerase chain reaction
Chromatin
chromatin
polymerase chain reaction
8 Citations (Scopus)

CARM1-expressing ovarian cancer depends on the histone methyltransferase EZH2 activity

Karakashev, S., Zhu, H., Wu, S., Yokoyama, Y., Bitler, B. G., Park, P. H., Lee, J. H., Kossenkov, A. V., Gaonkar, K. S., Yan, H. D., Drapkin, R., Conejo-Garcia, J. R., Speicher, D. W., Ordog, T. & Zhang, R., Dec 1 2018, In : Nature Communications. 9, 1, 631.

Research output: Contribution to journalArticle

Ovarian Neoplasms
tumor suppressor genes
cancer
tumors
Tumors

Comparative analysis of de novo assemblers for variation discovery in personal genomes

Tian, S., Yan, H. D., Klee, E. W., Kalmbach, M. & Slager, S. L., Sep 28 2018, In : Briefings in Bioinformatics. 19, 5, p. 893-904 12 p.

Research output: Contribution to journalArticle

Exome
Genes
Genome
Antigens
HLA Antigens
8 Citations (Scopus)

Distinct epigenetic landscapes underlie the pathobiology of pancreatic cancer subtypes

Lomberk, G., Blum, Y., Nicolle, R., Nair, A., Gaonkar, K. S., Marisa, L., Mathison, A., Sun, Z. D., Yan, H. D., Elarouci, N., Armenoult, L., Ayadi, M., Ordog, T., Lee, J. H., Oliver, G., Klee, E. W., Moutardier, V., Gayet, O., Bian, B., Duconseil, P. & 13 othersGilabert, M., Bigonnet, M., Garcia, S., Turrini, O., Delpero, J. R., Giovannini, M., Grandval, P., Gasmi, M., Secq, V., De Reyniès, A., Dusetti, N., Iovanna, J. & Urrutia, R., Dec 1 2018, In : Nature Communications. 9, 1, 1978.

Research output: Contribution to journalArticle

Pancreatic Neoplasms
Epigenomics
Adenocarcinoma
sequencing
cancer