Rochester, MN

Research Output 1961 2020

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Conference contribution
2013
2 Citations (Scopus)

Capacity management and patient scheduling in an outpatient clinic using discrete event simulation

Akin, G., Ivy, J. S., Huschka, T. R., Rohleder, T. R. & Marmor, Y. N., 2013, Proceedings of the 2013 Winter Simulation Conference - Simulation: Making Decisions in a Complex World, WSC 2013. p. 2215-2226 12 p. 6721598

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Discrete event simulation
Discrete Event Simulation
Scheduling
Date
Performance Indicators
3 Citations (Scopus)

Design and analysis of an antenna for wireless energy harvesting in a head-mountable DBS device

Hosain, M. K., Kouzani, A. Z., Tye, S. J., Abulseoud, O. A. & Berk, M., 2013, Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS. p. 3078-3081 4 p. 6610191

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Energy harvesting
Head
Antennas
Equipment and Supplies
Rats

EEG source imaging and connectivity analysis in epilepsy patients

Lu, Y., Worrell, G. A., Zhang, H. C., Sohrabpour, A. & He, B., 2013, Conference Record - Asilomar Conference on Signals, Systems and Computers. IEEE Computer Society, p. 795-797 3 p. 6810395

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Electroencephalography
Imaging techniques
Brain
Computer simulation
Transfer functions
4 Citations (Scopus)

Effects of phase aberration on acoustic radiation force-based shear wave generation

Amador, C., Aristizabal, S., Greenleaf, J. F. & Urban, M. W., 2013, IEEE International Ultrasonics Symposium, IUS. p. 348-351 4 p. 6724881

Research output: Chapter in Book/Report/Conference proceedingConference contribution

wave generation
sound waves
S waves
aberration
fats
1 Citation (Scopus)

Everyday technologies across the continuum of dementia care

Smith, G. E., 2013, Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS. p. 7040-7043 4 p. 6611179

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Continuity of Patient Care
Primary Prevention
Secondary Prevention
Caregivers
Dementia
13 Citations (Scopus)

Exploiting local low-rank structure in higher-dimensional MRI applications

Trazasko, J. D., 2013, Wavelets and Sparsity XV. Vol. 8858. 885821

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Magnetic resonance imaging
High-dimensional
Sparsity
Series
education
2 Citations (Scopus)

Fast shear compounding using directional filtering and two-dimensional shear wave speed calculation

Song, P., Manduca, A., Zhao, H., Urban, M. W., Greenleaf, J. F. & Chen, S. D., 2013, IEEE International Ultrasonics Symposium, IUS. p. 1264-1267 4 p. 6724788

Research output: Chapter in Book/Report/Conference proceedingConference contribution

compounding
S waves
shear
elastic properties
inclusions
5 Citations (Scopus)

Fibrosis detection in renal artery stenosis mouse model using magnetization transfer MRI

Ebrahimi, B., Macura, S. I., Knudsen, B. E., Grande, J. P. & Lerman, L. O., 2013, Progress in Biomedical Optics and Imaging - Proceedings of SPIE. Vol. 8672. 867205

Research output: Chapter in Book/Report/Conference proceedingConference contribution

fibrosis
Renal Artery Obstruction
arteries
Magnetic resonance imaging
mice
1 Citation (Scopus)

Flow diversion in rabbit aneurysm models

Cebral, J. R., Mut, F., Raschi, M., Kadirvel, R. D. & Kallmes, D. F., 2013, ASME 2013 Summer Bioengineering Conference, SBC 2013. Vol. 1 A.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Aneurysm
Rabbits

Hand instrument performance in a single site surgery simulator with novices

Riggle, J. D., Miller, E. E., McCrory, B., Meitl, A., Lim, E., Hallbeck, S. & LaGrange, C. A., 2013, Proceedings of the Human Factors and Ergonomics Society. p. 1522-1526 5 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Surgery
surgery
Simulators
performance
time

Human factors in the wild: Insight from developing solutions in healthcare (discussion panel)

Xiao, Y., Abts, N., Wolf, L., Hallbeck, S., Taneva, S., Chagpar, A. & Probst, C. A., 2013, Proceedings of the Human Factors and Ergonomics Society. p. 1057-1060 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Human engineering
Defects
Glucose
Identification (control systems)
Systems analysis

Identification of true knee flexion axis despite marker misplacement using principal component analysis

Jensen, E., Lugade, V., Crenshaw, J. & Kaufman, K. R., 2013, ASME 2013 Summer Bioengineering Conference, SBC 2013. Vol. 1 B.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Principal Component Analysis
Principal component analysis
Knee
Gait
Direction compound
2 Citations (Scopus)

Image-based modeling and characterization of RF ablation lesions in cardiac arrhythmia therapy

Linte, C. A., Camp, J. J., Rettmann, M. E., Holmes III, D. R. & Robb, R. A., 2013, Proceedings of SPIE - The International Society for Optical Engineering. Vol. 8671. 86710E

Research output: Chapter in Book/Report/Conference proceedingConference contribution

arrhythmia
Cardiac Arrhythmias
Ablation
lesions
ablation

Integrated cTAKES for concept mention detection and normalization

Liu, H. D., Wagholikar, K., Jonnalagadda, S. & Sohn, S., 2013, CEUR Workshop Proceedings. CEUR-WS, Vol. 1179.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Glossaries
Semantics
Labeling
Learning systems

Intra-aneurysmal flow complexity quantification using flowlines geometry

Hodis, S., Kallmes, D. F. & Dragomir Daescu, M. D., 2013, ASME 2013 Summer Bioengineering Conference, SBC 2013. Vol. 1 A.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Flowlines
Hydrodynamics
Computational fluid dynamics
Patient Simulation
Geometry

In vivo human assessment of bladder elasticity and compliance using Ultrasound Bladder Vibrometry (UBV) and comparison with urodynamic studies

Nenadic, I. Z., Mehrmohammadi, M., Urban, M. W., Alizad, A., Greenleaf, J. F., Husmann, D. A., Mynderse, L. A. & Fatemi, M., 2013, IEEE International Ultrasonics Symposium, IUS. p. 92-95 4 p. 6725303

Research output: Chapter in Book/Report/Conference proceedingConference contribution

bladder
elastic properties
Lamb waves
stiffening

In vivo measurement of renal transplant viscoelasticity

Urban, M. W., Amador, C. & Greenleaf, J. F., 2013, IEEE International Ultrasonics Symposium, IUS. p. 523-526 4 p. 6724857

Research output: Chapter in Book/Report/Conference proceedingConference contribution

viscoelasticity
kidneys
creatinine
serums
shear
5 Citations (Scopus)

In vivo patient measurements of bladder elasticity using Ultrasound Bladder Vibrometry (UBV)

Nenadic, I., Mehrmohammadi, M., Urban, M. W., Alizad, A., Greenleaf, J. F. & Fatemi, M., 2013, Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS. p. 113-116 4 p. 6609450

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Elasticity
Urinary Bladder
Ultrasonics
Volume measurement
Urodynamics
4 Citations (Scopus)

Isosemantic rendering of clinical information using formal ontologies and RDF

Martínez-Costa, C., Bosca, D., Legaz-García, M. C., Tao, C., Fernández Breis, J. T., Schulz, S. & Chute, C. G., 2013, Studies in Health Technology and Informatics. 1-2 ed. Vol. 192. p. 1085 1 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Semantics
Ontology
Terminology
Semantic Web
Datasets
2 Citations (Scopus)

Landscaping the effect of CT reconstruction parameters: Robust Interstitial Pulmonary Fibrosis quantitation

Raghunath, S., Rajagopalan, S., Karwoski, R. A., Bruesewitz, M. R., McCollough, C. H., Bartholmai, B. J. & Robb, R. A., 2013, Proceedings - International Symposium on Biomedical Imaging. p. 374-377 4 p. 6556490

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Computerized tomography
Pulmonary Fibrosis
Statistics
1 Citation (Scopus)

Laparoscopic surgical team stress measures during randomized controlled trials of 4-port vs. Single incision cholecystecomies: A pilot study

Hallbeck, S., Lowndes, B. & Bingener, J., 2013, Proceedings of the Human Factors and Ergonomics Society. p. 654-657 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Surgery
surgery
workload
fatigue
Medicine
1 Citation (Scopus)

Low-cost and flexible VEGF sensors based on microfluidic induced tunable graphene films

Zhang, B., Iezzi, R. & Cui, T., 2013, 2013 Transducers and Eurosensors XXVII: The 17th International Conference on Solid-State Sensors, Actuators and Microsystems, TRANSDUCERS and EUROSENSORS 2013. p. 143-146 4 p. 6626722

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Microfluidics
Graphene
Biosensors
Sensors
Costs
1 Citation (Scopus)

Manual segmentation certification platform

Duchesne, S., Valdivia, F., Robitaille, N., Abiel Valdivia, F., Bocchetta, M., Boccardi, M., Jack, C. R. J. & Frisoni, G. B., 2013, MeMeA 2013 - IEEE International Symposium on Medical Measurements and Applications, Proceedings. p. 35-39 5 p. 6549701

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Magnetic resonance imaging
7 Citations (Scopus)

Mapping dynamic changes in ventricular volume onto baseline cortical surfaces in normal aging, MCI, and Alzheimer's disease

Madsen, S. K., Gutman, B. A., Joshi, S. H., Toga, A. W., Jack, C. R. J., Weiner, M. W. & Thompson, P. M., 2013, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Vol. 8159 LNCS. p. 84-94 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 8159 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Alzheimer's Disease
Baseline
Brain
Aging of materials
Biomarkers
4 Citations (Scopus)

MayoClinicNLP–CORE: Semantic representations for textual similarity

Wu, S., Zhu, D., Carterette, B. & Liu, H. D., Jan 1 2013, *SEM 2013 - 2nd Joint Conference on Lexical and Computational Semantics. Association for Computational Linguistics (ACL), Vol. 1. p. 148-154 7 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Semantic Similarity
Semantics
Linear Regression Model
Feature Selection
Baseline
6 Citations (Scopus)

Measurement of longitudinal and circumferential waves in tubes and artery excited with ultrasound radiation force

Urban, M. W., Nenadic, I. Z., Pislaru, C. D. & Greenleaf, J. F., 2013, IEEE International Ultrasonics Symposium, IUS. p. 1765-1768 4 p. 6725153

Research output: Chapter in Book/Report/Conference proceedingConference contribution

longitudinal waves
arteries
tubes
radiation
transducers
1 Citation (Scopus)

Measuring binding interactions of neurite-extension promoting antibodies to supported lipid membranes using a multichannel microfluidic plasmonic nanohole array biosensor

Jordan, L., Xu, X., Wittenberg, N. J., Warrington, A. E., Denic, A., Wootla, B., Yoo, D., Watzlawik, J., Rodriguez, M. & Oh, S. H., 2013, 17th International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2013. Chemical and Biological Microsystems Society, Vol. 1. p. 215-217 3 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Gangliosides
Membrane Lipids
Microfluidics
Biosensors
Antibodies
1 Citation (Scopus)

Mining anti-coagulant drug-drug interactions from electronic health records using linked data

Pathak, J., Kiefer, R. C. & Chute, C. G., 2013, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Vol. 7970 LNBI. p. 128-140 13 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 7970 LNBI).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Drug interactions
Linked Data
Mining
Drugs
Health
2 Citations (Scopus)

Mining drug-drug interaction patterns from linked data: A case study for Warfarin, Clopidogrel, and Simvastatin

Pathak, J., Kiefer, R. C. & Chute, C. G., 2013, Proceedings - 2013 IEEE International Conference on Bioinformatics and Biomedicine, IEEE BIBM 2013. p. 23-30 8 p. 6732595

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Drug interactions
Drug therapy
Health
Semantic Web
Genes
2 Citations (Scopus)

Modeling of radiofrequency ablation lesions for image-guided arrhythmia therapy: A preliminary ex vivo demonstration

Linte, C. A., Camp, J. J., Holmes III, D. R., Rettmann, M. E. & Robb, R. A., 2013, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Vol. 7815 LNCS. p. 22-33 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 7815 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Arrhythmia
Ablation
Therapy
Demonstrations
Modeling

Modeling uncertainty due to instrument drift in clinical laboratories

Ramamohan, V., Yih, Y., Abbott, J. & Klee, G., 2013, IIE Annual Conference and Expo 2013. Institute of Industrial Engineers, p. 2523-2532 10 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Clinical laboratories
Analytic equipment
Drug dosage
Monte Carlo methods
Physics

Multiresolution image analysis for automatic quantification of collagen gel contraction

Chen, H. C., Yang, T. H., Thoreson, A. R., Zhao, C. D., Amadio, P. C., Su, F. C., Jia, W., Sun, Y. N., An, K. N. & Sun, M., 2013, Proceedings of the IEEE Annual Northeast Bioengineering Conference, NEBEC. p. 64-65 2 p. 6574359

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Collagen
Image analysis
Gels
Biocompatible Materials
Tissue engineering

Ontology-based temporal analysis for medical device adverse event- A use case study on Late Stent Thrombosis

Clark, K., Sharma, D., Qin, R., Jiang, G. D., Chute, C. G. & Tao, C., 2013, CEUR Workshop Proceedings. CEUR-WS, Vol. 1114.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Stents
Ontology
Computer systems
7 Citations (Scopus)

PCB pin-field considerations for 40 Gb/s SerDes channels

Degerstrom, M. J., Post, D. J., Gilbert, B. K. & Daniel, E. S., 2013, Proceedings - Electronic Components and Technology Conference. p. 1392-1400 9 p. 6575755

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Printed circuit boards

Phase aberration effects on beam shape evaluated with particle motion in an elastic phantom

Aristizabal, S., Amador, C., Greenleaf, J. F. & Urban, M. W., 2013, IEEE International Ultrasonics Symposium, IUS. p. 2006-2009 4 p. 6725192

Research output: Chapter in Book/Report/Conference proceedingConference contribution

particle motion
aberration
S waves
transducers
elastic properties
1 Citation (Scopus)

Phenotyping on EHR data using OWL and semantic web technologies

Tao, C., Li, D., Shen, F., Lian, Z., Pathak, J., Liu, H. D. & Chute, C. G., 2013, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Vol. 8040 LNCS. p. 31-32 2 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 8040 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Semantic Web
Health
Electronics

Planning of hepatectomy for tumor resection: Resection surface construction and optimization

Chen, W., Zhou, J., Xiong, W., Huang, W., Oo, T. & Venkatesh, S. K., 2013, Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS. p. 1286-1289 4 p. 6609743

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Hepatectomy
Liver
Tumors
Planning
Neoplasms

Planning of middle hepatic vein-guided hemihepatectomy: Resection pathway construction and optimization

Chen, W., Zhou, J., Huang, W., Chi, Y., Xiong, W., Venkatesh, S. K., Chang, S. K. Y., Liu, J. & Tian, Q., 2013, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Vol. 8090 LNCS. p. 55-64 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 8090 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Veins
Pathway
Planning
Liver
Optimization
2 Citations (Scopus)

Practical limitations of state-of-the-art passive printed circuit board power delivery networks for high performance compute systems

Smutzer, C. M., Gilbert, B. K. & Daniel, E. S., 2013, 2013 17th IEEE Workshop on Signal and Power Integrity, SPI 2013. 6558326

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Passive networks
Printed circuit boards
2 Citations (Scopus)

Prioritizing journals relevant to a topic for addressing clinicians' information needs

Jonnalagadda, S. R., Moosavinasab, S., Li, D., Abel, M. D., Chute, C. G. & Liu, H. D., 2013, Proceedings - 2013 IEEE International Conference on Bioinformatics and Biomedicine, IEEE BIBM 2013. p. 5-6 2 p. 6732590

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Decision making
Linear regression
Medicine
1 Citation (Scopus)

Profiling adverse drug events of cancer drug ingredients using normalized AERS data

Wang, L. & Liu, H. D., 2013, Proceedings - 2013 IEEE International Conference on Bioinformatics and Biomedicine, IEEE BIBM 2013. p. 46-52 7 p. 6732599

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Data mining
1 Citation (Scopus)

Quantitative consensus of supervised learners for diffuse lung parenchymal HRCT patterns

Raghunath, S., Rajagopalan, S., Karwoski, R. A., Bartholmai, B. J. & Robb, R. A., 2013, Proceedings of SPIE - The International Society for Optical Engineering. Vol. 8670. 867037

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Supervised learning
Pathology
Lung
Similarity Measure
lungs
57 Citations (Scopus)

RSNA/QIBA: Shear wave speed as a biomarker for liver fibrosis staging

Hall, T. J., Milkowski, A., Garra, B., Carson, P., Palmeri, M., Nightingale, K., Lynch, T., Alturki, A., Andre, M., Audiere, S., Bamber, J., Barr, R., Bercoff, J., Bercoff, J., Bernal, M., Brum, J., Chan, H. W., Chen, S. D., Cohen-Bacrie, C., Couade, M. & 36 others, Daniels, A., Dewall, R., Dillman, J., Ehman, R. L., Franchi-Abella, S., Fromageau, J., Gennisson, J. L., Henry, J. P., Ivancevich, N., Kalin, J., Kohn, S., Kugel, J., Lee, K., Liu, N., Loupas, T., Mazernik, J., McAleavey, S., Miette, V., Metz, S., Morel, B., Nelson, T., Nordberg, E., Oudry, J., Padwal, M., Rouze, N., Samir, A., Sandrin, L., Schaccitti, J., Schmitt, C., Shamdasani, V., Song, P., Switalski, P., Wang, M., Wear, K., Xie, H. & Zhao, H., 2013, IEEE International Ultrasonics Symposium, IUS. p. 397-400 4 p. 6725226

Research output: Chapter in Book/Report/Conference proceedingConference contribution

fibrosis
biomarkers
liver
S waves
3 Citations (Scopus)

Segmentation of hepatic tumor from abdominal CT data using an improved support vector machine framework

Zhou, J., Huang, W., Xiong, W., Chen, W. & Venkatesh, S. K., 2013, Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS. p. 3347-3350 4 p. 6610258

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Support vector machines
Tumors
Classifiers
Liver
Neoplasms

Segmentation of left atrial intracardiac ultrasound images for image guided cardiac ablation therapy

Rettmann, M. E., Stephens, T., Holmes III, D. R., Linte, C., Packer, D. L. & Robb, R. A., 2013, Proceedings of SPIE - The International Society for Optical Engineering. Vol. 8671. 86712D

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Ultrasound Image
Ablation
Echocardiography
Cardiac
ablation

Simulation-based analysis of scheduling decisions in an outpatient clinic

Akin, G., Ivy, J. S., Huschka, T. R. & Rohleder, T. R., 2013, IIE Annual Conference and Expo 2013. Institute of Industrial Engineers, p. 3550-3559 10 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Scheduling
Planning
1 Citation (Scopus)

Stable automated segmentation of liver MR elastography images for clinical stiffness measurement

Dzyubak, B., Venkatesh, S. K., Glaser, K., Yin, M., Talwalkar, J., Chen, J., Manduca, A. & Ehman, R. L., 2013, Progress in Biomedical Optics and Imaging - Proceedings of SPIE. Vol. 8672. 86721I

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Elasticity Imaging Techniques
liver
Liver
stiffness
Stiffness

Standardized drug and pharmacological class network construction

Zhu, Q., Jiang, G. D., Wang, L. & Chute, C. G., 2013, CEUR Workshop Proceedings. CEUR-WS, Vol. 1061.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Data integration
Terminology
Labels
3 Citations (Scopus)

Standardized drug and pharmacological class network construction

Zhu, Q., Jiang, G. D., Wang, L. & Chute, C. G., 2013, Studies in Health Technology and Informatics. 1-2 ed. Vol. 192. p. 1125 1 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Terminology
Pharmacology
Pharmaceutical Preparations
Data integration
Labels
5 Citations (Scopus)

Standardizing drug adverse event reporting data

Wang, L., Jiang, G. D., Li, D. & Liu, H. D., 2013, Studies in Health Technology and Informatics. 1-2 ed. Vol. 192. p. 1101 1 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Signal detection
Terminology
Drug-Related Side Effects and Adverse Reactions
Data mining
Research Design