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  • 2006

    Framework for a protein ontology

    Natale, D. A., Arighi, C. N., Barker, W., Blake, J., Chang, T. C., Hu, Z., Liu, H., Smith, B. & Wu, C. H., 2006, CIKM 2006 Workshop - Proceedings of TMBIO 2006: ACM First International Workshop on Text Mining in Bioinformatics. p. 29-36 8 p. (Proceedings of TMBIO 2006: ACM First International Workshop on Text Mining in Bioinformatics).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    3 Scopus citations
  • Fusion of vibro-acoustography images and X-ray mammography

    Gholamhosseini, H., Alizad, A. & Fatemi, M., 2006, 28th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS'06. p. 2803-2806 4 p. 4029939. (Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    4 Scopus citations
  • Geometric modeling, functional parameter calculation, and visualization of the in-vivo distended rectal wall

    Haider, C. R., Camp, J. J., Fletcher, J. G., Robb, R. A. & Bharucha, A. E., Jun 30 2006, Medical Imaging 2006: Physiology, Function, and Structure from Medical Images. 61431D. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6143 I).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    2 Scopus citations
  • Guidance for cone-beam CT design: Tradeoff between view sampling rate and completeness of scanning trajectories

    Chen, G. H., Siewerdsen, J. H., Leng, S., Moseley, D., Nett, B. E., Hsieh, J., Jaffray, D. & Mistretta, C. A., Jun 30 2006, Medical Imaging 2006: Physics of Medical Imaging. 614212. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6142 I).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    2 Scopus citations
  • Headwords and suffixes in biomedical names

    Torii, M. & Liu, H., Jul 10 2006, Knowledge Discovery in Life Science Literature - PAKDD 2006 International Workshop, KDLL 2006, Proceedings. p. 29-41 13 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 3886 LNBI).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    1 Scopus citations
  • Hepatic surgery for metastatic gastrointestinal neuroendocrine tumors

    Que, F. G., Sarmiento, J. M. & Nagorney, D. M., 2006, Liver and Pancreatic Diseases Management. Springer New York, p. 43-56 14 p. (Advances in Experimental Medicine and Biology; vol. 574).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    29 Scopus citations
  • High resolution multi-detector CT aided tissue analysis and quantification of lung fibrosis

    Zavaletta, V. A., Karwoski, R. A., Bartholmai, B. & Robb, R. A., 2006, Medical Imaging 2006: Physiology, Function, and Structure from Medical Images. 61432Z. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6143 II).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Identifying systemic factors that impact performance in the cardiac surgery operating room

    Wiegmann, D. A., ElBardissi, A. W., Dearani, J. A. & Sundt, T. M., Jan 1 2006, Proceedings of the Human Factors and Ergonomics Society 50th Annual Meeting, HFES 2006. Human Factors and Ergonomics Society Inc., p. 822-824 3 p. (Proceedings of the Human Factors and Ergonomics Society).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    1 Scopus citations
  • Image-based metrology of porous tissue engineering scaffolds

    Rajagopalan, S. & Robb, R. A., 2006, Medical Imaging 2006: Image Processing. 61441L. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6144 I).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    7 Scopus citations
  • Imaging mechanical properties of hepatic tissue by magnetic resonance elastography

    Yin, M., Rouviere, O., Burgart, L. J., Fidler, J. L., Manduca, A. & Ehman, R. L., Jun 30 2006, Medical Imaging 2006: Physiology, Function, and Structure from Medical Images. 61430Z. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6143 I).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Implications of MR contrast standardization on image computing

    Rajagopalan, S. & Robb, R. A., Jun 22 2006, Medical Imaging 2006: Image Processing. 61446L. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6144 III).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Intensity-based shape propagation for volumetric image segmentation

    Tan, E. T., Srinivasan, R. & Robb, R. A., 2006, 2006 3rd IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings. p. 738-741 4 p. 162522. (2006 3rd IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings; vol. 2006).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    1 Scopus citations
  • In Vivo breast vibro-acoustography: Recent results and new challenges

    Alizad, A., Whaley, D. H., Kinnick, R. R., Greenleaf, J. F. & Fatemi, M., Dec 1 2006, 2006 IEEE International Ultrasonics Symposium, IUS. p. 1659-1662 4 p. 4152275. (Proceedings - IEEE Ultrasonics Symposium; vol. 1).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    4 Scopus citations
  • Ka-band (35 GHz) low-noise 180 nm SOI CMOS amplifier

    Riemer, P. J., Prairie, J. F., Buhrow, B. R., Chen, C. L., Keast, C. L., Wyatt, P. W., Randall, B. A., Gilbert, B. K. & Daniel, E. S., Jan 1 2006, 2006 IEEE international SOI Conference Proceedings. Institute of Electrical and Electronics Engineers Inc., p. 125-126 2 p. 4062915. (Proceedings - IEEE International SOI Conference).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    3 Scopus citations
  • Learning classifiers from distributed, ontology-extended data sources

    Caragea, D., Zhang, J., Pathak, J. & Honavar, V., 2006, Data Warehousing and Knowledge Discovery - 8th International Conference, DaWaK 2006, Proceedings. Springer Verlag, p. 363-373 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4081 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    1 Scopus citations
  • Magnetic resonance elastography assesment of focused ultrasound surgery in cancer models - A pilot study

    Primak, S. V., Glaser, K. J., Lai, J., Rossman, P. J., Le, Y., Reynolds, C. A., Roberts, L. R., Felmlee, J. P. & Ehman, R. L., 2006, Proceedings of 2006 ASME International Mechanical Engineering Congress and Exposition, IMECE2006 - Bioengineering Division. American Society of Mechanical Engineers (ASME), (American Society of Mechanical Engineers, Bioengineering Division (Publication) BED).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Measurement of shear wave using ultrasound and Kalman filter with large background motion for cardiovascular studies

    Zheng, Y., Yao, A., Chen, S. & Greenleaf, J. F., Dec 1 2006, 2006 IEEE International Ultrasonics Symposium, IUS. p. 718-721 4 p. 4152050. (Proceedings - IEEE Ultrasonics Symposium; vol. 1).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    4 Scopus citations
  • Micro-CT as a guide for clinical CT development

    Ritman, E. L., Eaker, D. R. & Jorgensen, S. M., Nov 13 2006, Developments in X-Ray Tomography V. 631801. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6318).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Mixed meal simulation model of glucose-insulin system

    Dalla Man, C., Rizza, R. A. & Cobelli, C., 2006, 28th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS'06. p. 307-310 4 p. 4029886. (Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    28 Scopus citations
  • Modeling Web service composition using symbolic transition systems

    Pathak, J., Basu, S. & Honavar, V., Dec 1 2006, AI-Driven Technologies for Services-Oriented Computing - Papers from the AAAI Workshop, Technical Report. p. 44-51 8 p. (AAAI Workshop - Technical Report; vol. WS-06-01).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    12 Scopus citations
  • Modeling Web services by iterative reformulation of functional and non-functional requirements

    Pathak, J., Basu, S. & Honavar, V., 2006, Service-Oriented Computing - ICSOC 2006 - 4th International Conference, Proceedings. p. 314-326 13 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4294 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    24 Scopus citations
  • Molecular breast imaging using a dedicated high-performance instrument

    O'Connor, M. K., Wagenaar, D. J., Hruska, C. B., Phillips, S., Caravaglia, G. & Rhodes, D., Nov 13 2006, Hard X-Ray and Gamma-Ray Detector Physics and Penetrating Radiation Systems VIII. 63191D. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 6319).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    6 Scopus citations
  • MoSCoE: A framework for modeling web service composition and execution

    Pathak, J., Basu, S., Lutz, R. & Honavar, V., Jan 1 2006, ICDEW 2006 - Proceedings of the 22nd International Conference on Data Engineering Workshops. Zhou, X. & Barga, R. S. (eds.). Institute of Electrical and Electronics Engineers Inc., 1623939. (ICDEW 2006 - Proceedings of the 22nd International Conference on Data Engineering Workshops).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    16 Scopus citations
  • Noncontact modal testing of hard-drive suspensions using ultrasound radiation force

    Huber, T. M., Calhoun, D., Fatemi, M., Kinnick, R. R. & Greenleaf, J. F., 2006, IMAC-XXIV: Conference and Exposition on Structural Dynamics - Looking Forward: Technologies for IMAC. (Conference Proceedings of the Society for Experimental Mechanics Series).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    7 Scopus citations
  • Noninvasive detection of vessel stiffness from continuous blood pressure recordings in hypertensive subjects

    Jurak, P., Halamek, J., Somers, V. K., Plachy, M., Frana, P., Leinveber, P., Soucek, M. & Kara, T., 2006, 28th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS'06. p. 3222-3225 4 p. 4029253. (Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Noninvasive estimation of local elastic modulus of arteries with the ring resonance measurement

    Zhang, X. & Greenleaf, J. F., Dec 1 2006, 2006 IEEE International Ultrasonics Symposium, IUS. p. 1161-1164 4 p. 4152149. (Proceedings - IEEE Ultrasonics Symposium; vol. 1).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    3 Scopus citations
  • Optimization of CT image reconstruction algorithms for the Lung Tissue Research Consortium (LTRC)

    McCollough, C., Zhang, J., Bruesewitz, M. & Bartholmai, B., Jun 30 2006, Medical Imaging 2006: Physiology, Function, and Structure from Medical Images. 614330. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6143 II).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    2 Scopus citations
  • Optimizing EUDOC for the IBM eServer Blue Gene supercomputer

    Pang, Y. P., Swartz, B., Smith, B., Mullins, T., Peters, A. & Musselman, R., Dec 1 2006, Proceedings of the 2006 ACM/IEEE Conference on Supercomputing, SC'06. 1188635. (Proceedings of the 2006 ACM/IEEE Conference on Supercomputing, SC'06).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Paragangliomas: Clinical overview

    Young, W. F., Aug 2006, Pheochromocytoma: First International Symposium. Blackwell Publishing Inc., p. 21-29 9 p. (Annals of the New York Academy of Sciences; vol. 1073).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    153 Scopus citations
  • Parallel Web service composition in MoSCoE: A choreography-based approach

    Pathak, J., Basu, S., Lutz, R. & Honavar, V., Dec 1 2006, Proceedings of ECOWS 2006: Fourth European Conference on Web Services. p. 3-12 10 p. 4031145. (Proceedings of ECOWS 2006: Fourth European Conference on Web Services).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    23 Scopus citations
  • Phase aberration correction using ultrasound radiation force and vibrometry optimization

    Urban, M. W., Restrepo, M. B. & Greenleaf, J. F., Dec 1 2006, 2006 IEEE International Ultrasonics Symposium, IUS. p. 132-135 4 p. 4151902. (Proceedings - IEEE Ultrasonics Symposium; vol. 1).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Physiology of electrogenic SLC26 paralogues

    Romero, M. F., Chang, M. H., Plata, C., Zandi-Nejad, K., Mercado, A., Broumand, V., Sussman, C. R. & Mount, D. B., 2006, Epithelial Anion Transport in Health and Disease: The Role of the SLC26 Transporters Family. p. 126-138 13 p. (Novartis Foundation Symposium; vol. 273).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    25 Scopus citations
  • Polymer dynamics and rheology in designing and understanding polymeric biomaterials for tissue engineering applications

    Wang, S., Lu, L. & Yaszemski, M. J., Dec 1 2006, 2006 AIChE Annual Meeting. (AIChE Annual Meeting, Conference Proceedings).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Primary Care Practice Portal: A web based management reporting system for administrators, physicians and care teams

    Rahman, A. S., Naessens, J. M., Cabanela, R. L. & Anderson, S. S., Jan 1 2006, CITSA 2006 - 3rd Int. Conf. on Cybernetics and Information Technol., Systems and Applications, Jointly with the 4th Int. Conf. on Computing, Communications and Control Technologies, CCCT 2006 - Proc.. International Institute of Informatics and Systemics, IIIS, p. 242-245 4 p. (CITSA 2006 - 3rd Int. Conf. on Cybernetics and Information Technol., Systems and Applications, Jointly with the 4th Int. Conf. on Computing, Communications and Control Technologies, CCCT 2006 - Proc.; vol. 1).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Prior-information-driven multiple contrast projection of T2 weighted magnetic resonance images

    Rajagopalan, S. & Robb, R. A., Jun 22 2006, Medical Imaging 2006: Image Processing. 61446K. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6144 III).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Protein can act as unique template to assemble gold nanoparticles in a linear fashion

    Bhattacharya, R., Patra, C. R., Wang, S., Lu, L., Yaszemski, M. J., Mukhopadhyay, D. & Mukherjee, P., Dec 8 2006, 2006 NSTI Nanotechnology Conference and Trade Show - NSTI Nanotech 2006 Technical Proceedings. p. 833-836 4 p. (2006 NSTI Nanotechnology Conference and Trade Show - NSTI Nanotech 2006 Technical Proceedings; vol. 2).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Proton tolerance of InAs based HEMT and DHBT devices

    Currie, S. M., Harff, N. F., Pittelkow, R. G., Marshall, P. W., Bergman, J., Brar, B., Hacker, J. B., Gutierrez, A., Monier, C., Gilbert, B. K. & Daniel, E. S., Jan 1 2006, 2006 IEEE Radiation Effects Data Workshop, NSREC. Institute of Electrical and Electronics Engineers Inc., p. 66-71 6 p. 4077284. (IEEE Radiation Effects Data Workshop).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Real-time tracking of contrast bolus propagation in Continuously Moving Table MR angiography

    Trazasko, J. D., Riederer, S. J. & Manduca, A., 2006, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Vol. 4190 LNCS - I. p. 824-831 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4190 LNCS - I).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Real-time tracking of contrast bolus propagation in Continuously Moving Table MR angiography

    Trzasko, J., Riederer, S. & Manduca, A., Jan 1 2006, Medical Image Computing and Computer-Assisted Intervention, MICCAI 2006 - 9th International Conference, Proceedings. Springer Verlag, p. 824-831 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4190 LNCS - I).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    Open Access
    1 Scopus citations
  • Reproducibility of 3D micro-CT gray-scale and structural dimension data in longitudinal studies

    Jorgensen, S. M., Eaker, D. R., Vercnocke, A. J. & Ritman, E. L., Jun 30 2006, Medical Imaging 2006: Physiology, Function, and Structure from Medical Images. 61433H. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6143 II).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    2 Scopus citations
  • Resonance of rubber tubes generated by air force ultrasound transducers

    Zhang, X. M. & Greenleaf, J. F., Jan 1 2006, Proceedings of 2006 ASME International Mechanical Engineering Congress and Exposition, IMECE2006 - Bioengineering Division. American Society of Mechanical Engineers (ASME), (American Society of Mechanical Engineers, Bioengineering Division (Publication) BED).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • ROC analysis of ultrasound elasticity imaging of breast abnormalities

    Burnside, E. S., Hall, T. J., Sommer, A. M., Sisney, G. A., Hesley, G. K., Hangiandreou, N. J. & Svensson, W. E., Dec 1 2006, 2006 IEEE International Ultrasonics Symposium, IUS. p. 2048-2051 4 p. 4152378. (Proceedings - IEEE Ultrasonics Symposium; vol. 1).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    1 Scopus citations
  • Seed based registration for intraoperative brachytherapy dosimetry: A comparison of methods

    Su, Y., Davis, B. J., Herman, M. G. & Robb, R. A., Jun 22 2006, Medical Imaging 2006: Image Processing. 61442R. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6144 II).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    1 Scopus citations
  • Selecting and composing web services through iterative reformulation of functional specifications

    Pathak, J., Basu, S., Lutz, R. & Honavar, V., Dec 1 2006, Procedings - 18th IEEE International Conference on Tools with Artificial Intelligence, ICTAI 2006. p. 445-454 10 p. 4031930. (Proceedings - International Conference on Tools with Artificial Intelligence, ICTAI).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    9 Scopus citations
  • Shortest path adjusted similarity metrics for resolving boundary perturbations in scaffold images for tissue engineering

    Rajagopalan, S. & Robb, R., Jun 22 2006, Medical Imaging 2006: Image Processing. 61444E. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6144 II).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Simulation of a multiple operating room surgical suite

    Denton, B. T., Rahman, A. S., Nelson, H. & Bailey, A. C., Dec 1 2006, Proceedings of the 2006 Winter Simulation Conference, WSC. p. 414-424 11 p. 4117634. (Proceedings - Winter Simulation Conference).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    55 Scopus citations
  • Simultaneous temperature and tissue stiffness detection by mr elastography

    Le, Y., Rouviere, O., Ehman, R. & Felmlee, J. P., May 8 2006, THERAPEUTIC ULTRASOUND: 5th International Symposium on Therapeutic Ultrasound. p. 151-155 5 p. (AIP Conference Proceedings; vol. 829).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Spatiotemporal denoising and clustering of fMRI data

    Song, X., Murphy, M. & Wyrwicz, A. M., Dec 1 2006, 2006 IEEE International Conference on Image Processing, ICIP 2006 - Proceedings. p. 2857-2860 4 p. 4107165. (Proceedings - International Conference on Image Processing, ICIP).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    13 Scopus citations
  • Spatio-temporal source localization and granger causality in ictal source analysis

    Ding, L., Worrell, G. A., Lagerlund, T. D. & He, B., 2006, 28th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS'06. p. 3670-3671 2 p. 4030489. (Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    5 Scopus citations
  • Stimulation of proteoglycan synthesis with low-intensity 1 kHz vibration

    Argadine, H. M., Bolander, M. E. & Greenleaf, J. F., Dec 1 2006, 2006 IEEE International Ultrasonics Symposium, IUS. p. 849-851 3 p. 4152077. (Proceedings - IEEE Ultrasonics Symposium; vol. 1).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    4 Scopus citations