Gastroenterology and Hepatology

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2020

Diagnosing Colorectal Polyps in the Wild with Capsule Networks

Lalonde, R., Kandel, P., Spampinato, C., Wallace, M. B. & Bagci, U., Apr 2020, ISBI 2020 - 2020 IEEE International Symposium on Biomedical Imaging. IEEE Computer Society, p. 1086-1090 5 p. 9098411. (Proceedings - International Symposium on Biomedical Imaging; vol. 2020-April).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2019

A Method for Multi-day Tracking of Gastrointestinal Smooth Muscle Contractile Patterns in Organotypic Culture

Du, P., Mazzone, A., Calder, S., Qian, A., Gibbons, S. J., Farrugia, G. & Beyder, A., Jul 2019, 2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2019. Institute of Electrical and Electronics Engineers Inc., p. 4791-4794 4 p. 8857365. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

A Pipeline for the Registration of Calcium Transient Data to Structural Networks of the Interstitial Cells of Cajal

Qian, A., Means, S., Malysz, J., Farrugia, G., Gibbons, S. J. & Du, P., Jul 2019, 2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2019. Institute of Electrical and Electronics Engineers Inc., p. 2765-2768 4 p. 8857103. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Feasibility of High-Resolution Electrical Mapping for Characterizing Conduction Blocks Created by Gastric Ablation

Aghababaie, Z., Chan, C. H. A., Paskaranandavadivel, N., Beyder, A., Farrugia, G., Asirvatham, S., O'Grady, G., Cheng, L. K. & Angeli, T. R., Jul 2019, 2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2019. Institute of Electrical and Electronics Engineers Inc., p. 170-173 4 p. 8856406. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

INN: Inflated Neural Networks for IPMN Diagnosis

LaLonde, R., Tanner, I., Nikiforaki, K., Papadakis, G. Z., Kandel, P., Bolan, C. W., Wallace, M. B. & Bagci, U., Jan 1 2019, Medical Image Computing and Computer Assisted Intervention – MICCAI 2019 - 22nd International Conference, Proceedings. Shen, D., Yap, P-T., Liu, T., Peters, T. M., Khan, A., Staib, L. H., Essert, C. & Zhou, S. (eds.). Springer, p. 101-109 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11768 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

PAN: Projective Adversarial Network for Medical Image Segmentation

Khosravan, N., Mortazi, A., Wallace, M. & Bagci, U., Jan 1 2019, Medical Image Computing and Computer Assisted Intervention – MICCAI 2019 - 22nd International Conference, Proceedings. Shen, D., Yap, P-T., Liu, T., Peters, T. M., Khan, A., Staib, L. H., Essert, C. & Zhou, S. (eds.). Springer, p. 68-76 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11769 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2018

Deep multi-modal classification of intraductal papillary mucinous neoplasms (IPMN) with canonical correlation analysis

Hussein, S., Kandel, P., Corral, J. E., Bolan, C. W., Wallace, M. B. & Bagci, U., May 23 2018, 2018 IEEE 15th International Symposium on Biomedical Imaging, ISBI 2018. IEEE Computer Society, p. 800-804 5 p. (Proceedings - International Symposium on Biomedical Imaging; vol. 2018-April).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations
2013

Cellular automaton model for simulating tissue-specific intestinal electrophysiological activity

Gao, J., Du, P., O'Grady, G., Archer, R., Gibbons, S. J., Farrugia, G. & Cheng, L. K., Oct 31 2013, 2013 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2013. p. 5537-5540 4 p. 6610804. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations
2011

Retrieval evaluation and distance learning from perceived similarity between endomicroscopy videos

André, B., Vercauteren, T., Buchner, A. M., Wallace, M. B. & Ayache, N., Oct 11 2011, Medical Image Computing and Computer-Assisted Intervention, MICCAI 2011 - 14th International Conference, Proceedings. PART 3 ed. p. 297-304 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 6893 LNCS, no. PART 3).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access
10 Scopus citations
2010

An image retrieval approach to setup difficulty levels in training systems for endomicroscopy diagnosis

André, B., Vercauteren, T., Buchner, A. M., Shahid, M. W., Wallace, M. B. & Ayache, N., Nov 22 2010, Medical Image Computing and Computer-Assisted Intervention, MICCAI2010 - 13th International Conference, Proceedings. PART 2 ed. p. 480-487 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 6362 LNCS, no. PART 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access
14 Scopus citations

Introducing space and time in local feature-based endomicroscopic image retrieval

André, B., Vercauteren, T., Perchant, A., Buchner, A. M., Wallace, M. B. & Ayache, N., Apr 26 2010, Medical Content-Based Retrieval for Clinical Decision Support - First MICCAI International Workshop, MCBR-CDS 2009, Revised Selected Papers. p. 18-30 13 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5853 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

16 Scopus citations

Using mosaicing and visualwords

André, B., Vercauteren, T., Buchner, A. M., Wallace, M. B. & Ayache, N., Aug 9 2010, 2010 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2010 - Proceedings. p. 1419-1422 4 p. 5490265. (2010 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2010 - Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

15 Scopus citations
2009

Burn, freeze or photo-ablate? Comparative symptom profile in Barrett's dysplasia patients undergoing endoscopic ablation

Gill, K. R. S., Gross, S. A., Greenwald, B. D., Hemminger, L. L. & Wolfsen, H. C., Dec 1 2009, 12th World Congress of the International Photodynamic Association - Photodynamic Therapy: Back to the Future. 73804J. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7380).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Endomicroscopic image retrieval and classification using invariant visual features

André, B., Vercauteren, T., Perchant, A., Buchner, A. M., Wallace, M. B. & Ayache, N., Nov 17 2009, Proceedings - 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2009. p. 346-349 4 p. 5193055. (Proceedings - 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2009).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

20 Scopus citations

Variables in photodynamic therapy for Barrett's esophagus

Jones, L. R., Preyer, N. W., Buchanan, J., Reynolds, D. M., Wolfsen, H. C., Wallace, M. B. & Gill, K. R. S., Dec 1 2009, 12th World Congress of the International Photodynamic Association - Photodynamic Therapy: Back to the Future. 73800N. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7380).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2007

Computer aided classification of cell nuclei in the gastrointestinal tract a by volume and principal axis

Sagstetter, A. M., Camp, J. J., Lurken, M. S., Szurszewski, J. H., Farrugia, G., Gibbons, S. J. & Robb, R. A., Oct 19 2007, Medical Imaging 2007: Computer-Aided Diagnosis. PART 1 ed. 65140E. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6514, no. PART 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations
2006

Light dosimetry calculations for esophageal photodynamic therapy using porfimer sodium

Jones, L. R., Preyer, N. W., Davis, M. A., Grimes, C., Edling, K., Holdgate, N., Wallace, M. B. & Wolfsen, H. C., Jun 30 2006, Optical Methods for Tumor Treatment and Detection: Mechanisms and Techniques in Photodynamic Therapy XV. 61391D. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6139).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations