Gastroenterology and Hepatology

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  • 2020

    Diagnosing Colorectal Polyps in the Wild with Capsule Networks

    Lalonde, R., Kandel, P., Spampinato, C., Wallace, M. B. & Bagci, U., Apr 2020, ISBI 2020 - 2020 IEEE International Symposium on Biomedical Imaging. IEEE Computer Society, p. 1086-1090 5 p. 9098411. (Proceedings - International Symposium on Biomedical Imaging; vol. 2020-April).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    2 Scopus citations
  • 2019

    A Method for Multi-day Tracking of Gastrointestinal Smooth Muscle Contractile Patterns in Organotypic Culture

    Du, P., Mazzone, A., Calder, S., Qian, A., Gibbons, S. J., Farrugia, G. & Beyder, A., Jul 2019, 2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2019. Institute of Electrical and Electronics Engineers Inc., p. 4791-4794 4 p. 8857365. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • A Pipeline for the Registration of Calcium Transient Data to Structural Networks of the Interstitial Cells of Cajal

    Qian, A., Means, S., Malysz, J., Farrugia, G., Gibbons, S. J. & Du, P., Jul 2019, 2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2019. Institute of Electrical and Electronics Engineers Inc., p. 2765-2768 4 p. 8857103. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Feasibility of High-Resolution Electrical Mapping for Characterizing Conduction Blocks Created by Gastric Ablation

    Aghababaie, Z., Chan, C. H. A., Paskaranandavadivel, N., Beyder, A., Farrugia, G., Asirvatham, S., O'Grady, G., Cheng, L. K. & Angeli, T. R., Jul 2019, 2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2019. Institute of Electrical and Electronics Engineers Inc., p. 170-173 4 p. 8856406. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    4 Scopus citations
  • INN: Inflated Neural Networks for IPMN Diagnosis

    LaLonde, R., Tanner, I., Nikiforaki, K., Papadakis, G. Z., Kandel, P., Bolan, C. W., Wallace, M. B. & Bagci, U., 2019, Medical Image Computing and Computer Assisted Intervention – MICCAI 2019 - 22nd International Conference, Proceedings. Shen, D., Yap, P-T., Liu, T., Peters, T. M., Khan, A., Staib, L. H., Essert, C. & Zhou, S. (eds.). Springer, p. 101-109 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11768 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    1 Scopus citations
  • PAN: Projective Adversarial Network for Medical Image Segmentation

    Khosravan, N., Mortazi, A., Wallace, M. & Bagci, U., 2019, Medical Image Computing and Computer Assisted Intervention – MICCAI 2019 - 22nd International Conference, Proceedings. Shen, D., Yap, P-T., Liu, T., Peters, T. M., Khan, A., Staib, L. H., Essert, C. & Zhou, S. (eds.). Springer, p. 68-76 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11769 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • 2018

    Deep multi-modal classification of intraductal papillary mucinous neoplasms (IPMN) with canonical correlation analysis

    Hussein, S., Kandel, P., Corral, J. E., Bolan, C. W., Wallace, M. B. & Bagci, U., May 23 2018, 2018 IEEE 15th International Symposium on Biomedical Imaging, ISBI 2018. IEEE Computer Society, p. 800-804 5 p. (Proceedings - International Symposium on Biomedical Imaging; vol. 2018-April).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    3 Scopus citations
  • 2013

    Cellular automaton model for simulating tissue-specific intestinal electrophysiological activity

    Gao, J., Du, P., O'Grady, G., Archer, R., Gibbons, S. J., Farrugia, G. & Cheng, L. K., 2013, 2013 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2013. p. 5537-5540 4 p. 6610804. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    4 Scopus citations
  • 2011

    Retrieval evaluation and distance learning from perceived similarity between endomicroscopy videos

    André, B., Vercauteren, T., Buchner, A. M., Wallace, M. B. & Ayache, N., 2011, Medical Image Computing and Computer-Assisted Intervention, MICCAI 2011 - 14th International Conference, Proceedings. PART 3 ed. p. 297-304 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 6893 LNCS, no. PART 3).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    Open Access
    10 Scopus citations
  • 2010

    An image retrieval approach to setup difficulty levels in training systems for endomicroscopy diagnosis

    André, B., Vercauteren, T., Buchner, A. M., Shahid, M. W., Wallace, M. B. & Ayache, N., 2010, Medical Image Computing and Computer-Assisted Intervention, MICCAI2010 - 13th International Conference, Proceedings. PART 2 ed. p. 480-487 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 6362 LNCS, no. PART 2).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    Open Access
    14 Scopus citations
  • Introducing space and time in local feature-based endomicroscopic image retrieval

    André, B., Vercauteren, T., Perchant, A., Buchner, A. M., Wallace, M. B. & Ayache, N., 2010, Medical Content-Based Retrieval for Clinical Decision Support - First MICCAI International Workshop, MCBR-CDS 2009, Revised Selected Papers. p. 18-30 13 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5853 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    16 Scopus citations
  • Using mosaicing and visualwords

    André, B., Vercauteren, T., Buchner, A. M., Wallace, M. B. & Ayache, N., 2010, 2010 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2010 - Proceedings. p. 1419-1422 4 p. 5490265. (2010 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2010 - Proceedings).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    15 Scopus citations
  • 2009

    Burn, freeze or photo-ablate? Comparative symptom profile in Barrett's dysplasia patients undergoing endoscopic ablation

    Gill, K. R. S., Gross, S. A., Greenwald, B. D., Hemminger, L. L. & Wolfsen, H. C., Dec 1 2009, 12th World Congress of the International Photodynamic Association - Photodynamic Therapy: Back to the Future. 73804J. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7380).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Endomicroscopic image retrieval and classification using invariant visual features

    André, B., Vercauteren, T., Perchant, A., Buchner, A. M., Wallace, M. B. & Ayache, N., 2009, Proceedings - 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2009. p. 346-349 4 p. 5193055. (Proceedings - 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2009).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    20 Scopus citations
  • Variables in photodynamic therapy for Barrett's esophagus

    Jones, L. R., Preyer, N. W., Buchanan, J., Reynolds, D. M., Wolfsen, H. C., Wallace, M. B. & Gill, K. R. S., Dec 1 2009, 12th World Congress of the International Photodynamic Association - Photodynamic Therapy: Back to the Future. 73800N. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7380).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • 2007

    Computer aided classification of cell nuclei in the gastrointestinal tract a by volume and principal axis

    Sagstetter, A. M., Camp, J. J., Lurken, M. S., Szurszewski, J. H., Farrugia, G., Gibbons, S. J. & Robb, R. A., 2007, Medical Imaging 2007: Computer-Aided Diagnosis. PART 1 ed. 65140E. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6514, no. PART 1).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    1 Scopus citations
  • 2006

    Light dosimetry calculations for esophageal photodynamic therapy using porfimer sodium

    Jones, L. R., Preyer, N. W., Davis, M. A., Grimes, C., Edling, K., Holdgate, N., Wallace, M. B. & Wolfsen, H. C., Jun 30 2006, Optical Methods for Tumor Treatment and Detection: Mechanisms and Techniques in Photodynamic Therapy XV. 61391D. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6139).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    3 Scopus citations