Gastroenterology and Hepatology

Research Output

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Conference contribution
2019

A Method for Multi-day Tracking of Gastrointestinal Smooth Muscle Contractile Patterns in Organotypic Culture

Du, P., Mazzone, A., Calder, S., Qian, A., Gibbons, S. J., Farrugia, G. & Beyder, A., Jul 2019, 2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2019. Institute of Electrical and Electronics Engineers Inc., p. 4791-4794 4 p. 8857365. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

A Pipeline for the Registration of Calcium Transient Data to Structural Networks of the Interstitial Cells of Cajal

Qian, A., Means, S., Malysz, J., Farrugia, G., Gibbons, S. J. & Du, P., Jul 2019, 2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2019. Institute of Electrical and Electronics Engineers Inc., p. 2765-2768 4 p. 8857103. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Feasibility of High-Resolution Electrical Mapping for Characterizing Conduction Blocks Created by Gastric Ablation

Aghababaie, Z., Chan, C. H. A., Paskaranandavadivel, N., Beyder, A., Farrugia, G., Asirvatham, S., O'Grady, G., Cheng, L. K. & Angeli, T. R., Jul 2019, 2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2019. Institute of Electrical and Electronics Engineers Inc., p. 170-173 4 p. 8856406. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2018

Deep multi-modal classification of intraductal papillary mucinous neoplasms (IPMN) with canonical correlation analysis

Hussein, S., Kandel, P., Corral, J. E., Bolan, C. W., Wallace, M. B. & Bagci, U., May 23 2018, 2018 IEEE 15th International Symposium on Biomedical Imaging, ISBI 2018. IEEE Computer Society, Vol. 2018-April. p. 800-804 5 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations
2013

Cellular automaton model for simulating tissue-specific intestinal electrophysiological activity

Gao, J., Du, P., O'Grady, G., Archer, R., Gibbons, S. J., Farrugia, G. & Cheng, L. K., 2013, Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS. p. 5537-5540 4 p. 6610804

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations
2011

Retrieval evaluation and distance learning from perceived similarity between endomicroscopy videos

André, B., Vercauteren, T., Buchner, A. M., Wallace, M. B. & Ayache, N., 2011, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). PART 3 ed. Vol. 6893 LNCS. p. 297-304 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 6893 LNCS, no. PART 3).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2010

An image retrieval approach to setup difficulty levels in training systems for endomicroscopy diagnosis

André, B., Vercauteren, T., Buchner, A. M., Shahid, M. W., Wallace, M. B. & Ayache, N., 2010, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). PART 2 ed. Vol. 6362 LNCS. p. 480-487 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 6362 LNCS, no. PART 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Introducing space and time in local feature-based endomicroscopic image retrieval

André, B., Vercauteren, T., Perchant, A., Buchner, A. M., Wallace, M. B. & Ayache, N., 2010, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Vol. 5853 LNCS. p. 18-30 13 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5853 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

15 Scopus citations

Using mosaicing and visualwords

André, B., Vercauteren, T., Buchner, A. M., Wallace, M. B. & Ayache, N., 2010, 2010 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2010 - Proceedings. p. 1419-1422 4 p. 5490265

Research output: Chapter in Book/Report/Conference proceedingConference contribution

13 Scopus citations
2009

Burn, freeze or photo-ablate? Comparative symptom profile in Barrett's dysplasia patients undergoing endoscopic ablation

Gill, K. R. S., Gross, S. A., Greenwald, B. D., Hemminger, L. L. & Wolfsen, H. C., 2009, Progress in Biomedical Optics and Imaging - Proceedings of SPIE. Vol. 7380. 73804J

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Endomicroscopic image retrieval and classification using invariant visual features

André, B., Vercauteren, T., Perchant, A., Buchner, A. M., Wallace, M. B. & Ayache, N., 2009, Proceedings - 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2009. p. 346-349 4 p. 5193055

Research output: Chapter in Book/Report/Conference proceedingConference contribution

18 Scopus citations

Variables in photodynamic therapy for Barrett's esophagus

Jones, L. R., Preyer, N. W., Buchanan, J., Reynolds, D. M., Wolfsen, H. C., Wallace, M. B. & Gill, K. R. S., 2009, Progress in Biomedical Optics and Imaging - Proceedings of SPIE. Vol. 7380. 73800N

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2008

Monte carlo model of stricture formation in esophageal photodynamic therapy

Preyer, N. W., Jones, L. R., Reynolds, D. M., Wolfsen, H. C. & Wallace, M. B., 2008, Biomedical Optics, BIOMED 2008.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2007

Computer aided classification of cell nuclei in the gastrointestinal tract a by volume and principal axis

Sagstetter, A. M., Camp, J. J., Lurken, M. S., Szurszewski, J. H., Farrugia, G., Gibbons, S. J. & Robb, R. A., 2007, Progress in Biomedical Optics and Imaging - Proceedings of SPIE. PART 1 ed. Vol. 6514. 65140E

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations
2006

Light dosimetry calculations for esophageal photodynamic therapy using porfimer sodium

Jones, L. R., Preyer, N. W., Davis, M. A., Grimes, C., Edling, K., Holdgate, N., Wallace, M. B. & Wolfsen, H. C., 2006, Progress in Biomedical Optics and Imaging - Proceedings of SPIE. Vol. 6139. 61391D

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations
2000

Photodynamic therapy (PDT) with endoscopic ultrasound for the treatment of esophageal cancer

Woodward, T. A. & Wolfsen, H. C., 2000, Proceedings of SPIE - The International Society for Optical Engineering. Society of Photo-Optical Instrumentation Engineers, Vol. 3907. p. 422-425 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution