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2007

Seed-based generation of personalized bio-ontologies for information extraction

Tao, C. & Embley, D. W., Dec 1 2007, Advances in Conceptual Modeling - Foundations and Applications - ER 2007 Workshops CMLSA, FP-UML, ONISW, QoIS, RIGiM, SeCoGIS, Proceedings. p. 74-84 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4802 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

9 Scopus citations

Selected applications of dynamic radiation force of ultrasound in biomedicine

Alizad, A., Greenleaf, J. F. & Fatemi, M., 2007, IFMBE Proceedings. Jarm, T., Kramar, P. & zupanic, A. (eds.). 1 ed. Springer Verlag, p. 1021-1024 4 p. (IFMBE Proceedings; vol. 16, no. 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

Semiparametric RMA background-correction for oligonucleotide arrays

Bebu, I., Seillier-Moiseiwitsch, F. & Liu, H., Dec 1 2007, Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, BIBE. p. 1404-1408 5 p. 4375756. (Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, BIBE).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

SLC5 sodium-anion cotransporters and renal urate transport

Mount, D. B., Kwon, C. Y., Plata, C., Romero, M. F. & Zandi-Nejad, K., Jan 1 2007, RENAL STONE DISEASE: 1st Annual International Urolithiasis Research Symposium. American Institute of Physics Inc., p. 149-158 10 p. (AIP Conference Proceedings; vol. 900).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Sparse MRI reconstruction via multiscale L0-continuation

Trzasko, J., Manduca, A. & Borisch, E., Dec 1 2007, 2007 IEEE/SP 14th Workshop on Statistical Signal Processing, SSP 2007, Proceedings. p. 176-180 5 p. 4301242. (IEEE Workshop on Statistical Signal Processing Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

23 Scopus citations

Spectral analysis of heart sounds associated with coronary occlusions

Gauthier, D., Akay, Y. M., Paden, R. G., Pavliecek, W., Fortuin, F. D., Sweeney, J. K., Lee, R. W. & Akay, M., Jan 1 2007, 6th International Special Topic Conference on ITAB, 2007. Institute of Electrical and Electronics Engineers Inc., p. 49-52 4 p. 4407421. (Proceedings of the IEEE/EMBS Region 8 International Conference on Information Technology Applications in Biomedicine, ITAB).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

24 Scopus citations

State-of-the-art treatment of coccidioidomycosis: Skin and soft-tissue infections

Blair, J. E., Sep 2007, Coccidioidomycosis Sixth International Symposium. Blackwell Publishing Inc., p. 411-421 11 p. (Annals of the New York Academy of Sciences; vol. 1111).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

31 Scopus citations

State-of-the-art treatment of coccidioidomycosis skeletal infections

Blair, J. E., Sep 2007, Coccidioidomycosis Sixth International Symposium. Blackwell Publishing Inc., p. 422-433 12 p. (Annals of the New York Academy of Sciences; vol. 1111).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

26 Scopus citations

The camera-driven interactive table

Schwarz, C. & Da Vitoria Lobo, N., Aug 1 2007, Proceedings - IEEE Workshop on Applications of Computer Vision, WACV 2007. 4118779. (Proceedings - IEEE Workshop on Applications of Computer Vision, WACV 2007).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

The effect of recording reference on EEG: Phase synchrony and coherence

Hu, S., Stead, M., Gardner, A. B. & Worrell, G. A., Dec 24 2007, Advances in Neural Networks - ISNN 2007 - 4th International Symposium on Neural Networks, ISNN 2007, Proceedings. PART 2 ed. p. 1273-1280 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4492 LNCS, no. PART 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

6 Scopus citations

Time reversal principles for wave optimization in multiple driver magnetic resonance elastography

Mariappan, Y. K., Manduca, A. & Ehman, R. L., Oct 15 2007, Medical Imaging 2007: Physiology, Function, and Structure from Medical Images. PART 1 ed. 651119. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6511, no. PART 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Using distributional analysis to semantically classify UMLS concepts

Fan, J. W., Xu, H. & Friedman, C., Jan 1 2007, MEDINFO 2007 - Proceedings of the 12th World Congress on Health (Medical) Informatics: Building Sustainable Health Systems. IOS Press, p. 519-523 5 p. (Studies in Health Technology and Informatics; vol. 129).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Using magnetic resonance microscopy to assess the osteogenesis in porous hydrogels

Mishra, P., Dadsetan, M., Rajagopalan, S., Hefferan, T. E., Yaszemski, M. J. & Macura, S. I., Dec 1 2007, Magnetic Resonance in Material Science. p. 33-38 6 p. (Materials Research Society Symposium Proceedings; vol. 984).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Using Pareto fronts to evaluate polyp detection algorithms for CT colonography

Huang, A., Li, J., Summers, R. M., Petrick, N. & Hara, A. K., Oct 18 2007, Medical Imaging 2007: Computer-Aided Diagnosis. PART 1 ed. 651407. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6514, no. PART 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

Using SNOMED CT®as a reference terminology to cross map two highly pre-coordinated classification systems

Brown, S. H., Husser, C. S., Wahner-Roedler, D., Bailey, S., Nugent, L., Porter, K., Bauer, B. A. & Elkin, P. L., Jan 1 2007, MEDINFO 2007 - Proceedings of the 12th World Congress on Health (Medical) Informatics: Building Sustainable Health Systems. IOS Press, p. 636-639 4 p. (Studies in Health Technology and Informatics; vol. 129).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

5 Scopus citations
2008

A 35 GS/s 5-bit SiGe BiCMOS flash ADC with offset corrected exclusive-or comparator

Kertis, R. A., Humble, J. S., Daun-Lindberg, M. A., Philpott, R. A., Fritz, K. A., Schwab, D. J., Prairie, J. F., Gilbert, B. K. & Daniel, E. S., Dec 31 2008, 2008 IEEE Bipolar/BiCMOS Circuits and Technology Meeting. p. 252-255 4 p. 4662755. (Proceedings of the IEEE Bipolar/BiCMOS Circuits and Technology Meeting).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

13 Scopus citations

Accuracy of motor axon regeneration across single lumen and multi-channel poly(lactic-co-glycolic acid) (PLGA) nerve tubes

De Ruiter, G., Spinner, R., Malessy, M., Moore, M., Sorenson, E., Currier, B., Yaszemski, M. & Windebank, A., Dec 1 2008, 8th World Biomaterials Congress 2008. 1 p. (8th World Biomaterials Congress 2008; vol. 3).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Accurate resistance, inductance, capacitance, and conductance (RLCG) from uniform transmission line measurements

Degerstrom, M. J., Gilbert, B. K. & Daniel, E. S., Dec 1 2008, Electrical Performance of Electronic Packaging, EPEP 2008. p. 77-80 4 p. 4675881. (Electrical Performance of Electronic Packaging, EPEP).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

23 Scopus citations

A conceptual-model-based computational alembic for a web of knowledge

Embley, D. W., Liddle, S. W., Lonsdale, D., Nagy, G., Tijerino, Y., Clawson, R., Crabtree, J., Ding, Y., Jha, P., Lian, Z., Lynn, S., Padmanabhan, R. K., Peters, J., Tao, C., Watts, R., Woodbury, C. & Zitzelberger, A., Dec 5 2008, Conceptual Modeling - ER 2008 - 27th International Conference on Conceptual Modeling, Proceedings. p. 532-533 2 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5231 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

Adopting graph traversal techniques for context-driven value sets extraction from biomedical knowledge sources

Pathak, J., Jiang, G., Dwarkanath, S. O., Buntrock, J. D. & Chute, C. G., 2008, Proceedings - IEEE International Conference on Semantic Computing 2008, ICSC 2008. p. 460-467 8 p. 4597226. (Proceedings - IEEE International Conference on Semantic Computing 2008, ICSC 2008).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

A feature selection algorithm capable of handling extremely large data dimensionality

Sun, Y., Todorovic, S. & Goodison, S., 2008, Society for Industrial and Applied Mathematics - 8th SIAM International Conference on Data Mining 2008, Proceedings in Applied Mathematics 130. Society for Industrial and Applied Mathematics Publications, p. 530-540 11 p. (Society for Industrial and Applied Mathematics - 8th SIAM International Conference on Data Mining 2008, Proceedings in Applied Mathematics 130; vol. 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access
18 Scopus citations

A fixed point method for homotopic ℓ0-minimization with application to MR image recovery

Trzasko, J. D. & Manduca, A., May 14 2008, Medical Imaging 2008 - Physics of Medical Imaging. 69130F. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6913).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations

A fuzzy c-means algorithm using a correlation metrics and gene ontology

Zhang, M., Therneau, T., McKenzie, M. A., Li, P. & Yang, P., Jan 1 2008, 2008 19th International Conference on Pattern Recognition, ICPR 2008. Institute of Electrical and Electronics Engineers Inc., 4761672. (Proceedings - International Conference on Pattern Recognition).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

5 Scopus citations

Analysis of microarray titration experiments

Bebu, I., Seillier-Moiseiwitsch, F. & Liu, H., Dec 1 2008, Proceedings of the 2008 International Conference on Bioinformatics and Computational Biology, BIOCOMP 2008. p. 942-946 5 p. (Proceedings of the 2008 International Conference on Bioinformatics and Computational Biology, BIOCOMP 2008).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

A novel imaging beta probe for radioguided surgery

Thacker, S. C., Stack, B. C., Lowe, V., Gaysinskiy, V., Cool, S., Nagarkar, V. V. & Entine, G., Dec 1 2008, 2008 IEEE Nuclear Science Symposium Conference Record, NSS/MIC 2008. p. 3875-3878 4 p. 4774128. (IEEE Nuclear Science Symposium Conference Record).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

A novel micro optical probe for early diagnosis of upper gastrointestinal (GI) cancers

Garcia-Uribe, A., Balareddy, K. C., Zou, J., Wang, K. K. & Wang, L. V., 2008, 2008 IEEE Sensors, SENSORS 2008. p. 910-913 4 p. 4716589. (Proceedings of IEEE Sensors).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Antibody microarrays for immunoisolation of T-cells and immunodetection of secreted cytokines

Zhu, H., Stybayeva, G., Ramanculov, E., Dandekar, S., George, M. & Revzin, A., 2008, AIChE100 - 2008 AIChE Annual Meeting, Conference Proceedings. (AIChE Annual Meeting, Conference Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

A preliminary investigation of ROI-image reconstruction with the rebinned BPF algorithm

Bian, J., Xia, D., Yu, L., Sidky, E. Y. & Pan, X., May 14 2008, Medical Imaging 2008 - Physics of Medical Imaging. 69132I. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6913).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Automatic real-time capture and segmentation of endoscopy video

Stanek, S. R., Tavanapong, W., Wong, J. S., Oh, J. H. & De Groen, P. C., May 7 2008, Medical Imaging 2008: PACS and Imaging Informatics. 69190X. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6919).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

6 Scopus citations

Automatic skeletonization for 3D hepatic portal vein in CT angiography

Jingjing, L., Zhi, Z., Pengfei, S., Enmin, S., Daoyu, H. & Qingguo, X., Dec 1 2008, 2008 IEEE Nuclear Science Symposium Conference Record, NSS/MIC 2008. p. 5396-5399 4 p. 4774452. (IEEE Nuclear Science Symposium Conference Record).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

Bariatric surgery and stone disease

Lieske, J. C. & Kumar, R., Oct 22 2008, Renal Stone Disease 2 - 2nd International Urolithiasis Research Symposium. p. 189-193 5 p. (AIP Conference Proceedings; vol. 1049).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Biosurveillance evaluation of SNOMED CT's terminology (BEST Trial): Coverage of chief complaints

Elkin, P. L., Brown, S. H., Balas, A., Temesgen, Z., Wahner-Roedler, D., Froehling, D., Liebow, M., Trusko, B., Rosenbloom, S. T. & Poland, G., 2008, Studies in Health Technology and Informatics. IOS Press, p. 797-802 6 p. (Studies in Health Technology and Informatics; vol. 136).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations

Broadband resonant-plate permittivity measurement technique for printed wiring boards aided by electromagnetic simulations

McCoy, B. O., Buhrow, B. R., Gilbert, B. K. & Daniel, E. S., Dec 1 2008, International Engineering Consortium - DesignCon 2008. p. 1286-1310 25 p. (International Engineering Consortium - DesignCon 2008).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

CAD of colon cancer on CT colonography cases without cathartic bowel preparation

Linguraru, M. G., Zhao, S., Van Uitert, R. L., Liu, J., Fletcher, J. G., Manduca, A. & Summers, R. M., 2008, Proceedings of the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS'08. IEEE Computer Society, p. 2996-2999 4 p. 4649833. (Proceedings of the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS'08 - "Personalized Healthcare through Technology").

Research output: Chapter in Book/Report/Conference proceedingConference contribution

7 Scopus citations

Coherent x-ray scattering for discriminating bio-compatible materials in tissue scaffolds

Cui, C., Jorgensen, S. M., Eaker, D. R. & Ritman, E. L., Nov 21 2008, Developments in X-Ray Tomography VI. 70781S. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 7078).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

7 Scopus citations

Combining nomogram and microarray data for predicting prostate cancer recurrence

Sun, Y., Cai, Y. & Goodison, S., Dec 1 2008, 8th IEEE International Conference on BioInformatics and BioEngineering, BIBE 2008. 4696692. (8th IEEE International Conference on BioInformatics and BioEngineering, BIBE 2008).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations

Comparison of classification methods on protein-protein interaction document classification

Xu, G., Niu, Z., Uetz, P., Gao, X. & Liu, H., 2008, Proceedings - 2008 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW. p. 83-90 8 p. 4686213. (Proceedings - 2008 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Composing web services through automatic reformulation of service specifications

Pathak, J., Basu, S. & Honavar, V., Sep 19 2008, Proceedings - 2008 IEEE International Conference on Services Computing, SCC 2008. p. 361-369 9 p. 4578483. (Proceedings - 2008 IEEE International Conference on Services Computing, SCC 2008; vol. 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

6 Scopus citations

Dendrimer-based nanodevices for sustained intravitreal drug delivery

Rajaguru, B., Kannan, R. M. & Iezzi, R., Dec 1 2008, AIChE100 - 2008 AIChE Annual Meeting, Conference Proceedings. (AIChE Annual Meeting, Conference Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Designing electroactive biointerface for spatiotemporal control of cell attachment and release

Shah, S., Zhu, H., Yan, J., Verkhoturov, S. & Revzin, A., 2008, ECS Transactions - Electrochemical Nano/Biosensors. 22 ed. p. 17-25 9 p. (ECS Transactions; vol. 13, no. 22).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Developing patient-specific anatomic models for validation of cardiac ablation guidance procedures

Holmes, D., Rettmann, M., Cameron, B., Camp, J. & Robb, R., Jun 18 2008, Medical Imaging 2008 - Visualization, Image-Guided Procedures, and Modeling. 69181W. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6918).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

9 Scopus citations

Developmental restructuring of the creatine kinase system integrates mitochondrial energetics with stem cell cardiogenesis

Chung, S., Dzeja, P. P., Faustino, R. S. & Terzic, A., Dec 2008, Mitochondria and Oxidative Stress in Neurodegenerative Disorders. Blackwell Publishing Inc., p. 254-263 10 p. (Annals of the New York Academy of Sciences; vol. 1147).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

30 Scopus citations

Document classification for mining host pathogen protein-protein interactions

Xu, G., Yin, L., Torii, M., Niu, Z., Wu, C., Hu, Z. & Liu, H., 2008, Proceedings - IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2008. p. 461-466 6 p. 4684940. (Proceedings - IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2008).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

Dual energy CT - How to best blend both energies in one fused image?

Eusemann, C., Holmes, D. R., Schmidt, B., Flohr, T. G., Robb, R., McCollough, C., Hough, D. M., Huprich, J. E., Wittmer, M., Siddiki, H. & Fletcher, J. G., Jun 18 2008, Medical Imaging 2008 - Visualization, Image-Guided Procedures, and Modeling. 691803. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6918).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

23 Scopus citations

Edge cross-section features for detection of appendiceal orifice appearance in colonoscopy videos

Wang, Y., Tavanapong, W., Wong, J., Oh, J. H. & De Groen, P. C., Dec 1 2008, Proceedings of the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS'08. p. 3000-3003 4 p. 4649834. (Proceedings of the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS'08 - "Personalized Healthcare through Technology").

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

Effect of dynamic flow on hydrogel-mediated phenotypic expression of human osteoblasts

Heine-Geldern, A., Dadsetan, M., Benedikt, M., Gaustad, D., Herrick, J., Shogren, K. L., Maran, A., Hefferan, T. E. & Yaszemski, M. J., Dec 1 2008, 8th World Biomaterials Congress 2008. 1 p. (8th World Biomaterials Congress 2008; vol. 3).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Enzymatically synthesized pegylated polymers as nanomicellar drug delivery systems

Kumar, R., Pandey, M. K., Tyagi, R., Parmar, V. S., Watterson, A. C. & Kumar, J., Mar 28 2008, Polymers for Biomedical Applications. American Chemical Society, p. 204-224 21 p. (ACS Symposium Series; vol. 977).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

8 Scopus citations

Ergonomic usability testing of operating room devices

Hallbeck, M. S., Koneczny, S., Büchel, D. & Matern, U., Jan 1 2008, Medicine Meets Virtual Reality 16 - Parallel, Combinatorial, Convergent: NextMed by Design, MMVR 2008. IOS Press, p. 147-152 6 p. (Studies in Health Technology and Informatics; vol. 132).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

11 Scopus citations

Evaluation of input control type and screen view orientation for a hand-held radiation detector

Crowe, J., Castillejos, P., Herring, S. & Hallbeck, M. S., Dec 1 2008, 52nd Human Factors and Ergonomics Society Annual Meeting, HFES 2008. p. 1672-1676 5 p. (Proceedings of the Human Factors and Ergonomics Society; vol. 3).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Exact and approximate cone-beam reconstruction algorithms for C-arm based cone-beam CT using a two-concentric-arc source trajectory

Zhuang, T., Zambelli, J., Nett, B., Leng, S. & Chen, G. H., 2008, Medical Imaging 2008 - Physics of Medical Imaging. 691321. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6913).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations