Referenceless stratification of parenchymal lung abnormalities

Sushravya Raghunath, Srinivasan Rajagopalan, Ronald A. Karwoski, Brian J. Bartholmai, Richard A. Robb

Research output: Chapter in Book/Report/Conference proceedingConference contribution

5 Scopus citations

Abstract

This paper introduces computational tools that could enable personalized, predictive, preemptive, and participatory (P4) Pulmonary medicine. We demonstrate approaches to (a) stratify lungs from different subjects based on the spatial distribution of parenchymal abnormality and (b) visualize the stratification through glyphs that convey both the grouping efficacy and an iconic overview of an individual's lung wellness. Affinity propagation based on regional parenchymal abnormalities is used in the referenceless stratification. Abnormalities are computed using supervised classification based on Earth Mover's distance. Twenty natural clusters were detected from 372 CT lung scans. The computed clusters correlated with clinical consensus of 9 disease types. The quality of inter- and intra-cluster stratification as assessed by ANOSIM R was 0.887 ± 0.18 (pval < 0.0005). The proposed tools could serve as biomarkers to objectively diagnose pathology, track progression and assess pharmacologic response within and across patients.

Original languageEnglish (US)
Title of host publicationMedical Image Computing and Computer-Assisted Intervention, MICCAI 2011 - 14th International Conference, Proceedings
Pages223-230
Number of pages8
EditionPART 3
DOIs
StatePublished - Oct 11 2011
Event14th International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2011 - Toronto, ON, Canada
Duration: Sep 18 2011Sep 22 2011

Publication series

NameLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
NumberPART 3
Volume6893 LNCS
ISSN (Print)0302-9743
ISSN (Electronic)1611-3349

Other

Other14th International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2011
CountryCanada
CityToronto, ON
Period9/18/119/22/11

Keywords

  • Referenceless stratification
  • affinity propagation
  • glyphs
  • idiopathic pulmonary fibrosis

ASJC Scopus subject areas

  • Theoretical Computer Science
  • Computer Science(all)

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  • Cite this

    Raghunath, S., Rajagopalan, S., Karwoski, R. A., Bartholmai, B. J., & Robb, R. A. (2011). Referenceless stratification of parenchymal lung abnormalities. In Medical Image Computing and Computer-Assisted Intervention, MICCAI 2011 - 14th International Conference, Proceedings (PART 3 ed., pp. 223-230). (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 6893 LNCS, No. PART 3). https://doi.org/10.1007/978-3-642-23626-6_28