TY - GEN
T1 - Random search as a neural network optimization strategy for Convolutional-Neural-Network (CNN)-based noise reduction in CT
AU - Huber, Nathan R.
AU - Missert, Andrew D.
AU - Gong, Hao
AU - Hsieh, Scott S.
AU - Leng, Shuai
AU - Yu, Lifeng
AU - McCollough, Cynthia H.
N1 - Funding Information:
Research reported in this work was supported by the Department of Radiology at the Mayo Clinic, the CT Clinical Innovation Center, and Mayo Clinic Graduate School of Biomedical Sciences. Authors would like to thank Kristina M. Nunez for assistance in editing the manuscript.
Publisher Copyright:
© 2021 SPIE.
PY - 2021
Y1 - 2021
N2 - In this study, we describe a systematic approach to optimize deep-learning-based image processing algorithms using random search. The optimization technique is demonstrated on a phantom-based noise reduction training framework; however, the techniques described can be applied generally for other deep learning image processing applications. The parameter space explored included number of convolutional layers, number of filters, kernel size, loss function, and network architecture (either U-Net or ResNet). A total of 100 network models were examined (50 random search, 50 ablation experiments). Following the random search, ablation experiments resulted in a very minor performance improvement indicating near optimal settings were found during the random search. The top performing network architecture was a U-Net with 4 pooling layers, 64 filters, 3x3 kernel size, ELU activation, and a weighted feature reconstruction loss (0.2×VGG + 0.8×MSE). Relative to the low-dose input image, the CNN reduced noise by 90%, reduced RMSE by 34%, and increased SSIM by 76% on six patient exams reserved for testing. The visualization of hepatic and bone lesions was greatly improved following noise reduction.
AB - In this study, we describe a systematic approach to optimize deep-learning-based image processing algorithms using random search. The optimization technique is demonstrated on a phantom-based noise reduction training framework; however, the techniques described can be applied generally for other deep learning image processing applications. The parameter space explored included number of convolutional layers, number of filters, kernel size, loss function, and network architecture (either U-Net or ResNet). A total of 100 network models were examined (50 random search, 50 ablation experiments). Following the random search, ablation experiments resulted in a very minor performance improvement indicating near optimal settings were found during the random search. The top performing network architecture was a U-Net with 4 pooling layers, 64 filters, 3x3 kernel size, ELU activation, and a weighted feature reconstruction loss (0.2×VGG + 0.8×MSE). Relative to the low-dose input image, the CNN reduced noise by 90%, reduced RMSE by 34%, and increased SSIM by 76% on six patient exams reserved for testing. The visualization of hepatic and bone lesions was greatly improved following noise reduction.
KW - Deep learning
KW - Hyper-parameter optimization
KW - Noise reduction
KW - Random search
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U2 - 10.1117/12.2582143
DO - 10.1117/12.2582143
M3 - Conference contribution
AN - SCOPUS:85103665913
T3 - Progress in Biomedical Optics and Imaging - Proceedings of SPIE
BT - Medical Imaging 2021
A2 - Isgum, Ivana
A2 - Landman, Bennett A.
PB - SPIE
T2 - Medical Imaging 2021: Image Processing
Y2 - 15 February 2021 through 19 February 2021
ER -