TY - JOUR
T1 - Quality assessment and correlation of microsatellite instability and immunohistochemical markers among population- And clinic-based colorectal tumors
T2 - Results from the colon cancer family registry
AU - Cicek, Mine S.
AU - Lindor, Noralane M.
AU - Gallinger, Steven
AU - Bapat, Bharati
AU - Hopper, John L.
AU - Jenkins, Mark A.
AU - Young, Joanne
AU - Buchanan, Daniel
AU - Walsh, Michael D.
AU - Le Marchand, Loic
AU - Burnett, Terrilea
AU - Newcomb, Polly A.
AU - Grady, William M.
AU - Haile, Robert W.
AU - Casey, Graham
AU - Plummer, Sarah J.
AU - Krumroy, Lisa A.
AU - Baron, John A.
AU - Thibodeau, Stephen N.
N1 - Funding Information:
Supported by the National Cancer Institute, National Institutes of Health ( RFA CA-95-011 ) and through cooperative agreements with members of the Colon Cancer Family Registry (CFR). Collaborating centers include the Australian Colorectal Cancer Family Registry (UO1 CA097735), the University of Southern California Familial Colorectal Neoplasia Collaborative Group (UO1 CA074799), the Mayo Clinic Cooperative Family Registry for Colon Cancer Studies (UO1 CA074800), the Ontario Registry for Studies of Familial Colorectal Cancer (UO1 CA074783), the Seattle Colorectal Cancer Family Registry (UO1 CA074794), the University of Hawaii Colorectal Cancer Family Registry (UO1 CA074806), and the University of California, Irvine, Informatics Center (UO1 CA078296).
PY - 2011/5
Y1 - 2011/5
N2 - The detection of defective mismatch repair (MMR), as assessed by the presence of tumor microsatellite instability (MSI) and/or loss of MMR protein expression by IHC, has been useful for risk assessment, prognosis, and prediction of treatment in patients with colorectal cancer. We analyzed tumors for the presence of defective MMR from 5927 Colorectal Cancer Family Registry patients recruited at six international consortium sites. We evaluated the appropriate percentage instability cutoff used to distinguish the three MSI phenotypes [ie, stable (MSS), low instability (MSI-L), and high instability (MSIH)]; the sensitivity, specificity, and performance characteristics of individual markers; and the concordance between MSI and IHC phenotypes. Guided by the results of the IHC testing, our findings indicate that the distinction between an MSI-H phenotype from a low-instability or MSS phenotype can best be accomplished by using a cutoff of 30% or greater of the markers showing instability. The sensitivity and specificity of the mononucleotide markers were higher than those of the dinucleotide markers. Specifically, BAT26 and BAT25 had the highest sensitivity (94%) and specificity (98%), and the use of mononucleotide markers alone identified 97% of the MSI-H cases correctly. As expected, the presence of MSI-H correlated with an older age of diagnosis, the presence of tumor in the proximal colon, and female sex.
AB - The detection of defective mismatch repair (MMR), as assessed by the presence of tumor microsatellite instability (MSI) and/or loss of MMR protein expression by IHC, has been useful for risk assessment, prognosis, and prediction of treatment in patients with colorectal cancer. We analyzed tumors for the presence of defective MMR from 5927 Colorectal Cancer Family Registry patients recruited at six international consortium sites. We evaluated the appropriate percentage instability cutoff used to distinguish the three MSI phenotypes [ie, stable (MSS), low instability (MSI-L), and high instability (MSIH)]; the sensitivity, specificity, and performance characteristics of individual markers; and the concordance between MSI and IHC phenotypes. Guided by the results of the IHC testing, our findings indicate that the distinction between an MSI-H phenotype from a low-instability or MSS phenotype can best be accomplished by using a cutoff of 30% or greater of the markers showing instability. The sensitivity and specificity of the mononucleotide markers were higher than those of the dinucleotide markers. Specifically, BAT26 and BAT25 had the highest sensitivity (94%) and specificity (98%), and the use of mononucleotide markers alone identified 97% of the MSI-H cases correctly. As expected, the presence of MSI-H correlated with an older age of diagnosis, the presence of tumor in the proximal colon, and female sex.
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U2 - 10.1016/j.jmoldx.2010.12.004
DO - 10.1016/j.jmoldx.2010.12.004
M3 - Article
C2 - 21497289
AN - SCOPUS:79954605264
SN - 1525-1578
VL - 13
SP - 271
EP - 281
JO - Journal of Molecular Diagnostics
JF - Journal of Molecular Diagnostics
IS - 3
ER -