TY - JOUR
T1 - Magnetization exchange network editing
T2 - mathematical principles and experimental demonstration
AU - Zolnai, Zsolt
AU - Juranić, Nenad
AU - Markley, John L.
AU - Macura, Slobodan
N1 - Funding Information:
The authorst hankMs. Amy Rothmanf or editing the text. ZsZ and JLM were supportedb y grant RR02301 from the BiomedicaRl esearchT echnology Program of the National Center for ResearchR e-sources,N ationalI nstituteso f Health.
PY - 1995/11/1
Y1 - 1995/11/1
N2 - We have examined analytically the effects of different NMR magnetization exchange network editing (MENE) procedures, starting from equilibrium or nonequilibrium conditions, on generalized systems that undergo magnetization exchange (cross-relaxation and/or chemical exchange). Larger errors in derived exchange rate constants are found in experiments that start from nonequilibrium states than in those that start from equilibrium. On the other hand, editing experiments that decompose the dynamic matrix into two or more block diagonal submatrices generally yield more accurate exchange rate constants. Theoretical arguments, backed up by experimental results, demonstrate that MENE experiments lead to increased rates of relaxation for the edited cross and diagonal peaks. We describe a new class of heteronuclear editing experiment in which the system starts from a nonequilibrium state and is edited during the mixing period. In an experimental application of this approach to the spectral analysis of a small protein, recombinant human ubiquitin (Mr 8565) labeled uniformly with 15N and 13C, we demonstrate how the cross-relaxation network of the protein can be decomposed simultaneously into subnetworks of 15N-bound protons, aliphatic 13C-bound protons, aromatic 13C-bound protons, and (12C/14N/O)-bound protons. Such a decomposition permits the measurement of slower magnetization exchange rates, including those that are masked in conventional cross-relaxation experiments.
AB - We have examined analytically the effects of different NMR magnetization exchange network editing (MENE) procedures, starting from equilibrium or nonequilibrium conditions, on generalized systems that undergo magnetization exchange (cross-relaxation and/or chemical exchange). Larger errors in derived exchange rate constants are found in experiments that start from nonequilibrium states than in those that start from equilibrium. On the other hand, editing experiments that decompose the dynamic matrix into two or more block diagonal submatrices generally yield more accurate exchange rate constants. Theoretical arguments, backed up by experimental results, demonstrate that MENE experiments lead to increased rates of relaxation for the edited cross and diagonal peaks. We describe a new class of heteronuclear editing experiment in which the system starts from a nonequilibrium state and is edited during the mixing period. In an experimental application of this approach to the spectral analysis of a small protein, recombinant human ubiquitin (Mr 8565) labeled uniformly with 15N and 13C, we demonstrate how the cross-relaxation network of the protein can be decomposed simultaneously into subnetworks of 15N-bound protons, aliphatic 13C-bound protons, aromatic 13C-bound protons, and (12C/14N/O)-bound protons. Such a decomposition permits the measurement of slower magnetization exchange rates, including those that are masked in conventional cross-relaxation experiments.
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U2 - 10.1016/0301-0104(95)00174-M
DO - 10.1016/0301-0104(95)00174-M
M3 - Article
AN - SCOPUS:21844493556
SN - 0301-0104
VL - 200
SP - 161
EP - 179
JO - Chemical Physics
JF - Chemical Physics
IS - 1-2
ER -