DNA compression caused by an upstream point mutation

Brian G. Weinshenker, David D. Hebrink, A. Marquis Gacy, Cynthia T. McMurray

Research output: Contribution to journalArticlepeer-review

3 Scopus citations

Abstract

We observed an apparent series of insertions and deletions beginning 5 bp downstream of an A→G silent transition in exon 1 of the tumor necrosis factor receptor 1 gene. The apparent sequence anomaly was observed only in individuals carrying the transition. Formamide gel electrophoresis revealed that the apparent sequence anomaly was due to compression. The compression is plausibly explained by a hairpin in the reaction products in a region of trinucleotide CAG repeats. One should suspect the presence of DNA compression when a series of deletions and insertions follows a single base pair mutation that leads to a series of trinucleotide repeats.

Original languageEnglish (US)
Pages (from-to)68-72
Number of pages5
JournalBioTechniques
Volume25
Issue number1
DOIs
StatePublished - 1998

ASJC Scopus subject areas

  • Biotechnology
  • Biochemistry, Genetics and Molecular Biology(all)

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