TY - GEN
T1 - Deep Generative Networks for Algorithm Development in Implantable Neural Technology
AU - Mivalt, Filip
AU - Sladky, Vladimir
AU - Balzekas, Irena
AU - Pridalova, Tereza
AU - Miller, Kai J.
AU - Van Gompel, Jamie
AU - Denison, Timothy
AU - Brinkmann, Benjamin H.
AU - Kremen, Vaclav
AU - Worrell, Gregory A.
N1 - Funding Information:
F M was partially supported by grant FEKT-K-22-7649 realized within the project Quality Internal Grants of Brno University of Technology (KInG BUT), Reg. No. CZ.02.2.69/0.0/0.0/19_073/0016948, which is financed from the OP RDE. V K was partially supported by institutional funding of Czech Technical University in Prague, Czech Republic. Certicon a.s. provided Cyber PSG viewer for research purposes.
Funding Information:
This work was supported by NIH Brain Initiative UH2&3 NS095495 Neurophysiologically-Based Brain State Tracking & Modulation in Focal Epilepsy, R01-NS92882 Reliable Seizure Prediction Using Physiological Signals and Machine Learning, DARPA HR0011-20-2-0028 Manipu lating and Optimizing Brain Rhythms for Enhancement of Sleep (Morpheus), Mayo Clinic, and Medtronic Inc. Medtronic provided the investigational Medtronic Summit RC+STMdevices. This research benefited from the community expertise and resources made available by the NIH Open Mind Consortium NIH U24-NS113637 (https://openmind-consortium.github.io/).
Publisher Copyright:
© 2022 IEEE.
PY - 2022
Y1 - 2022
N2 - Electrical stimulation of deep brain structures is an established therapy for drug-resistant focal epilepsy. The emerging implantable neural sensing and stimulating (INSS) technology enables simultaneous delivery of chronic deep brain stimulation (DBS) and recording of electrical brain activity from deep brain structures while patients live in their home environment. Long-term intracranial electroencephalography (iEEG) iEEG signals recorded by INSS devices represent an opportunity to investigate brain neurophysiology and how DBS affects neural circuits. However, novel algorithms and data processing pipelines need to be developed to facilitate research of these long-term iEEG signals. Early-stage analytical infrastructure development for INSS applications can be limited by lacking iEEG data that might not always be available. Here, we investigate the feasibility of utilizing the Deep Generative Adversarial Network (DCGAN) for synthetic iEEG data generation. We trained DCGAN using 3-second iEEG segments and validated synthetic iEEG usability by training a classification model, using synthetic iEEG only and providing a good classification performance on unseen real iEEG with an F1 score 0.849. Subsequently, we demonstrated the feasibility of utilizing the synthetic iEEG in the INSS application development by training a deep learning network for DBS artifact removal using synthetic data only and demonstrated the performance on real iEEG signals. The presented strategy of on-demand generating synthetic iEEG will benefit early-stage algorithm development for INSS applications.
AB - Electrical stimulation of deep brain structures is an established therapy for drug-resistant focal epilepsy. The emerging implantable neural sensing and stimulating (INSS) technology enables simultaneous delivery of chronic deep brain stimulation (DBS) and recording of electrical brain activity from deep brain structures while patients live in their home environment. Long-term intracranial electroencephalography (iEEG) iEEG signals recorded by INSS devices represent an opportunity to investigate brain neurophysiology and how DBS affects neural circuits. However, novel algorithms and data processing pipelines need to be developed to facilitate research of these long-term iEEG signals. Early-stage analytical infrastructure development for INSS applications can be limited by lacking iEEG data that might not always be available. Here, we investigate the feasibility of utilizing the Deep Generative Adversarial Network (DCGAN) for synthetic iEEG data generation. We trained DCGAN using 3-second iEEG segments and validated synthetic iEEG usability by training a classification model, using synthetic iEEG only and providing a good classification performance on unseen real iEEG with an F1 score 0.849. Subsequently, we demonstrated the feasibility of utilizing the synthetic iEEG in the INSS application development by training a deep learning network for DBS artifact removal using synthetic data only and demonstrated the performance on real iEEG signals. The presented strategy of on-demand generating synthetic iEEG will benefit early-stage algorithm development for INSS applications.
KW - DBS
KW - DBS artifact removal
KW - DCGAN
KW - implantable neural technology
KW - synthetic iEEG
UR - http://www.scopus.com/inward/record.url?scp=85142694617&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=85142694617&partnerID=8YFLogxK
U2 - 10.1109/SMC53654.2022.9945379
DO - 10.1109/SMC53654.2022.9945379
M3 - Conference contribution
AN - SCOPUS:85142694617
T3 - Conference Proceedings - IEEE International Conference on Systems, Man and Cybernetics
SP - 1736
EP - 1741
BT - 2022 IEEE International Conference on Systems, Man, and Cybernetics, SMC 2022 - Proceedings
PB - Institute of Electrical and Electronics Engineers Inc.
T2 - 2022 IEEE International Conference on Systems, Man, and Cybernetics, SMC 2022
Y2 - 9 October 2022 through 12 October 2022
ER -