Clinical decision support for colonoscopy surveillance using natural language processing

Kavishwar Wagholikar, Sunghwan Sohn, Stephen Wu, Vinod Kaggal, Sheila Buehler, Robert Greenes, Tsung Teh Wu, David Larson, Hongfang D Liu, Rajeev Chaudhry, Lisa Allyn Boardman

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Citations (Scopus)

Abstract

Colorectal cancer is the second leading cause of cancer-related deaths in the United States. However, 41% of patients do not receive adequate screening, since the surveillance guidelines for colonoscopy are complex and are not easily recalled by health care providers. As a potential solution, we developed a guideline based clinical decision support system (CDSS) that can interpret relevant freetext reports including indications, pathology and procedure notes. The CDSS was evaluated by comparing its recommendations with those of a gastroenterologist for a test set of 53 patients. The CDSS made the optimal recommendation in 48 cases, and helped the gastroenterologist revise the recommendation in 3 cases. We performed an error analysis for the 5 failure cases, and subsequently were able to modify the CDSS to output the correct recommendation for all the test cases. Results indicate that the system has a high potential for clinical deployment, but further evaluation and optimization is required. Limitations of our study are that the study was conducted at a single institution and with a single expert, and the evaluation did not include rare decision scenarios. Overall our work demonstrates the utility of natural language processing to enhance clinical decision support.

Original languageEnglish (US)
Title of host publicationProceedings - 2012 IEEE 2nd Conference on Healthcare Informatics, Imaging and Systems Biology, HISB 2012
Pages12-21
Number of pages10
DOIs
StatePublished - 2012
Event2012 IEEE 2nd Conference on Healthcare Informatics, Imaging and Systems Biology, HISB 2012 - San Diego, CA, United States
Duration: Sep 27 2012Sep 28 2012

Other

Other2012 IEEE 2nd Conference on Healthcare Informatics, Imaging and Systems Biology, HISB 2012
CountryUnited States
CitySan Diego, CA
Period9/27/129/28/12

Fingerprint

Clinical Decision Support Systems
Natural Language Processing
Colonoscopy
Decision support systems
Processing
Guidelines
Bioelectric potentials
Pathology
Health care
Error analysis
Screening
Health Personnel
Colorectal Neoplasms
Neoplasms

Keywords

  • clinical decision support
  • colonoscopy
  • colorectal cancer
  • natural language processing

ASJC Scopus subject areas

  • Biomedical Engineering
  • Health Informatics
  • Health Information Management

Cite this

Wagholikar, K., Sohn, S., Wu, S., Kaggal, V., Buehler, S., Greenes, R., ... Boardman, L. A. (2012). Clinical decision support for colonoscopy surveillance using natural language processing. In Proceedings - 2012 IEEE 2nd Conference on Healthcare Informatics, Imaging and Systems Biology, HISB 2012 (pp. 12-21). [6366186] https://doi.org/10.1109/HISB.2012.11

Clinical decision support for colonoscopy surveillance using natural language processing. / Wagholikar, Kavishwar; Sohn, Sunghwan; Wu, Stephen; Kaggal, Vinod; Buehler, Sheila; Greenes, Robert; Wu, Tsung Teh; Larson, David; Liu, Hongfang D; Chaudhry, Rajeev; Boardman, Lisa Allyn.

Proceedings - 2012 IEEE 2nd Conference on Healthcare Informatics, Imaging and Systems Biology, HISB 2012. 2012. p. 12-21 6366186.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Wagholikar, K, Sohn, S, Wu, S, Kaggal, V, Buehler, S, Greenes, R, Wu, TT, Larson, D, Liu, HD, Chaudhry, R & Boardman, LA 2012, Clinical decision support for colonoscopy surveillance using natural language processing. in Proceedings - 2012 IEEE 2nd Conference on Healthcare Informatics, Imaging and Systems Biology, HISB 2012., 6366186, pp. 12-21, 2012 IEEE 2nd Conference on Healthcare Informatics, Imaging and Systems Biology, HISB 2012, San Diego, CA, United States, 9/27/12. https://doi.org/10.1109/HISB.2012.11
Wagholikar K, Sohn S, Wu S, Kaggal V, Buehler S, Greenes R et al. Clinical decision support for colonoscopy surveillance using natural language processing. In Proceedings - 2012 IEEE 2nd Conference on Healthcare Informatics, Imaging and Systems Biology, HISB 2012. 2012. p. 12-21. 6366186 https://doi.org/10.1109/HISB.2012.11
Wagholikar, Kavishwar ; Sohn, Sunghwan ; Wu, Stephen ; Kaggal, Vinod ; Buehler, Sheila ; Greenes, Robert ; Wu, Tsung Teh ; Larson, David ; Liu, Hongfang D ; Chaudhry, Rajeev ; Boardman, Lisa Allyn. / Clinical decision support for colonoscopy surveillance using natural language processing. Proceedings - 2012 IEEE 2nd Conference on Healthcare Informatics, Imaging and Systems Biology, HISB 2012. 2012. pp. 12-21
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