TY - JOUR
T1 - Background Removal and Vessel Filtering of Noncontrast Ultrasound Images of Microvasculature
AU - Bayat, Mahdi
AU - Fatemi, Mostafa
AU - Alizad, Azra
N1 - Funding Information:
Manuscript received November 30, 2017; revised February 22, 2018, April 23, 2018, and July 7, 2018; accepted July 18, 2018. Date of publication July 20, 2018; date of current version February 18, 2019. This work was supported by the National Institutes of Health Grants R01EB017213, R01CA148994, R01CA168575, R01CA195527, R01CA174723, and R01DK099231. (Corresponding authors: Mahdi Bayat and Azra Alizad.) M. Bayat is with the Biomedical Engineering and Physiology Department, Mayo Clinic College of Science and Medicine, Rochester, MN 55905 USA (e-mail:,bayat.mahdi@mayo.edu).
Publisher Copyright:
© 1964-2012 IEEE.
PY - 2019/3
Y1 - 2019/3
N2 - Objective: Recent advances in ultrasound Doppler imaging have made it possible to visualize small vessels with diameters near the imaging resolution limits using spatiotemporal singular value thresholding of long ensembles of ultrasound data. However, vessel images derived based on this method present severe intensity variations and additional background noise that limits visibility and subsequent processing such as centerline extraction and morphological analysis. The goal of this paper is to devise a method to enhance vessel-background separation directly on the power Doppler images by exploiting blood echo-noise independence. Method: We present a two-step algorithm to mitigate these adverse effects when using singular value thresholding for obtaining gross vasculature images. Our method comprises a morphological-based filtering for removing global and local background signals and a multiscale Hessian-based vessel enhancement filtering to further improve the vascular structures. We applied our method for in vivo imaging of the microvasculature of kidney in one healthy subject, liver in five healthy subjects, thyroid nodules in five patients, and breast tumors in five patients. Results: Singular value thresholding, top-hat filtering, and Hessian-based vessel enhancement filtering each provided an average peak-to-side level gain of 1.11, 18.55, and 2.26 dB, respectively, resulting in an overall gain of 21.92 dB when compared to the conventional power Doppler imaging using infinite impulse response filtering. Conclusion: Singular value thresholding combined with morphological and Hessian-based vessel enhancement filtering provides a powerful tool for visualization of the deep-seated small vessels using long ultrasound echo ensembles without requiring any type of contrast enhancing agents. Significance: This method provides a fast and cost-effective modality for in vivo assessment of the microvasculature suitable for both clinical and preclinical applications.
AB - Objective: Recent advances in ultrasound Doppler imaging have made it possible to visualize small vessels with diameters near the imaging resolution limits using spatiotemporal singular value thresholding of long ensembles of ultrasound data. However, vessel images derived based on this method present severe intensity variations and additional background noise that limits visibility and subsequent processing such as centerline extraction and morphological analysis. The goal of this paper is to devise a method to enhance vessel-background separation directly on the power Doppler images by exploiting blood echo-noise independence. Method: We present a two-step algorithm to mitigate these adverse effects when using singular value thresholding for obtaining gross vasculature images. Our method comprises a morphological-based filtering for removing global and local background signals and a multiscale Hessian-based vessel enhancement filtering to further improve the vascular structures. We applied our method for in vivo imaging of the microvasculature of kidney in one healthy subject, liver in five healthy subjects, thyroid nodules in five patients, and breast tumors in five patients. Results: Singular value thresholding, top-hat filtering, and Hessian-based vessel enhancement filtering each provided an average peak-to-side level gain of 1.11, 18.55, and 2.26 dB, respectively, resulting in an overall gain of 21.92 dB when compared to the conventional power Doppler imaging using infinite impulse response filtering. Conclusion: Singular value thresholding combined with morphological and Hessian-based vessel enhancement filtering provides a powerful tool for visualization of the deep-seated small vessels using long ultrasound echo ensembles without requiring any type of contrast enhancing agents. Significance: This method provides a fast and cost-effective modality for in vivo assessment of the microvasculature suitable for both clinical and preclinical applications.
KW - Microvasculature
KW - morphological filtering
KW - singular value decomposition
KW - ultrasound Doppler imaging
KW - vessel filtering
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U2 - 10.1109/TBME.2018.2858205
DO - 10.1109/TBME.2018.2858205
M3 - Article
C2 - 30040621
AN - SCOPUS:85050405721
SN - 0018-9294
VL - 66
SP - 831
EP - 842
JO - IRE transactions on medical electronics
JF - IRE transactions on medical electronics
IS - 3
M1 - 8416688
ER -