Background Removal and Vessel Filtering of Non-Contrast Ultrasound Images of Microvasculature

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2 Citations (Scopus)

Abstract

Objective: recent advances in ultrasound Doppler imaging have made it possible to visualize small vessels with diameters near the imaging resolution using spatial-temporal singular value thresholding of long ensembles of ultrasound data. However, vessel images derived based on this method present severe intensity variations and additional background noise that limits visibility and subsequent processing such as centerline extraction and morphological analysis. The goal of this paper is to devise a method to enhance vessel-background separation directly on the power Doppler images by exploiting blood echo-noise independence. Method: we present a two-step algorithm to mitigate these adverse effects when using singular value thresholding for obtaining gross vasculature images. Our method comprises a morphological-based filtering for removing global and local background signals and a multi-scale Hessian-based vessel enhancement filtering to further improve the vascular structures. We applied our method for in vivo imaging of the microvasculature of kidney in one healthy subject, liver in five healthy subjects, thyroid nodules in five patients, and breast tumors in five patients. Results: singular value thresholding, top-hat filtering and Hessian-based vessel enhancement filtering each provided an average peak-to-side level gain of 1.11dB, 18.55dB and 2.26dB respectively, resulting in an overall gain of 21.92dB when compared to the conventional power Doppler imaging using infinite impulse response filtering. Conclusion: singular value thresholding combined with morphological and Hessian-based vessel enhancement filtering provides a powerful tool for visualization of the deep-seated small vessels using ultrasound echo data without requiring any type of contrast enhancing agents. Significance: this method provides a fast and cost-effective modality for in vivo assessment of the microvasculature suitable for both clinical and preclinical applications.

Original languageEnglish (US)
JournalIEEE Transactions on Biomedical Engineering
DOIs
StateAccepted/In press - Jul 19 2018

Fingerprint

Ultrasonics
Imaging techniques
Impulse response
Visibility
Liver
Tumors
Blood
Visualization
Processing
Costs

Keywords

  • Blood
  • Clutter
  • Doppler effect
  • Filtering
  • Imaging
  • microvasculature
  • morphological filtering
  • singular value decomposition
  • Thresholding (Imaging)
  • Ultrasonic imaging
  • ultrasound Doppler imaging
  • vessel filtering

ASJC Scopus subject areas

  • Biomedical Engineering

Cite this

@article{58a52f88defb4143bfb4aa4eb1724ca8,
title = "Background Removal and Vessel Filtering of Non-Contrast Ultrasound Images of Microvasculature",
abstract = "Objective: recent advances in ultrasound Doppler imaging have made it possible to visualize small vessels with diameters near the imaging resolution using spatial-temporal singular value thresholding of long ensembles of ultrasound data. However, vessel images derived based on this method present severe intensity variations and additional background noise that limits visibility and subsequent processing such as centerline extraction and morphological analysis. The goal of this paper is to devise a method to enhance vessel-background separation directly on the power Doppler images by exploiting blood echo-noise independence. Method: we present a two-step algorithm to mitigate these adverse effects when using singular value thresholding for obtaining gross vasculature images. Our method comprises a morphological-based filtering for removing global and local background signals and a multi-scale Hessian-based vessel enhancement filtering to further improve the vascular structures. We applied our method for in vivo imaging of the microvasculature of kidney in one healthy subject, liver in five healthy subjects, thyroid nodules in five patients, and breast tumors in five patients. Results: singular value thresholding, top-hat filtering and Hessian-based vessel enhancement filtering each provided an average peak-to-side level gain of 1.11dB, 18.55dB and 2.26dB respectively, resulting in an overall gain of 21.92dB when compared to the conventional power Doppler imaging using infinite impulse response filtering. Conclusion: singular value thresholding combined with morphological and Hessian-based vessel enhancement filtering provides a powerful tool for visualization of the deep-seated small vessels using ultrasound echo data without requiring any type of contrast enhancing agents. Significance: this method provides a fast and cost-effective modality for in vivo assessment of the microvasculature suitable for both clinical and preclinical applications.",
keywords = "Blood, Clutter, Doppler effect, Filtering, Imaging, microvasculature, morphological filtering, singular value decomposition, Thresholding (Imaging), Ultrasonic imaging, ultrasound Doppler imaging, vessel filtering",
author = "Mahdi Bayat and Mostafa Fatemi and Azra Alizad",
year = "2018",
month = "7",
day = "19",
doi = "10.1109/TBME.2018.2858205",
language = "English (US)",
journal = "IEEE Transactions on Biomedical Engineering",
issn = "0018-9294",
publisher = "IEEE Computer Society",

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TY - JOUR

T1 - Background Removal and Vessel Filtering of Non-Contrast Ultrasound Images of Microvasculature

AU - Bayat, Mahdi

AU - Fatemi, Mostafa

AU - Alizad, Azra

PY - 2018/7/19

Y1 - 2018/7/19

N2 - Objective: recent advances in ultrasound Doppler imaging have made it possible to visualize small vessels with diameters near the imaging resolution using spatial-temporal singular value thresholding of long ensembles of ultrasound data. However, vessel images derived based on this method present severe intensity variations and additional background noise that limits visibility and subsequent processing such as centerline extraction and morphological analysis. The goal of this paper is to devise a method to enhance vessel-background separation directly on the power Doppler images by exploiting blood echo-noise independence. Method: we present a two-step algorithm to mitigate these adverse effects when using singular value thresholding for obtaining gross vasculature images. Our method comprises a morphological-based filtering for removing global and local background signals and a multi-scale Hessian-based vessel enhancement filtering to further improve the vascular structures. We applied our method for in vivo imaging of the microvasculature of kidney in one healthy subject, liver in five healthy subjects, thyroid nodules in five patients, and breast tumors in five patients. Results: singular value thresholding, top-hat filtering and Hessian-based vessel enhancement filtering each provided an average peak-to-side level gain of 1.11dB, 18.55dB and 2.26dB respectively, resulting in an overall gain of 21.92dB when compared to the conventional power Doppler imaging using infinite impulse response filtering. Conclusion: singular value thresholding combined with morphological and Hessian-based vessel enhancement filtering provides a powerful tool for visualization of the deep-seated small vessels using ultrasound echo data without requiring any type of contrast enhancing agents. Significance: this method provides a fast and cost-effective modality for in vivo assessment of the microvasculature suitable for both clinical and preclinical applications.

AB - Objective: recent advances in ultrasound Doppler imaging have made it possible to visualize small vessels with diameters near the imaging resolution using spatial-temporal singular value thresholding of long ensembles of ultrasound data. However, vessel images derived based on this method present severe intensity variations and additional background noise that limits visibility and subsequent processing such as centerline extraction and morphological analysis. The goal of this paper is to devise a method to enhance vessel-background separation directly on the power Doppler images by exploiting blood echo-noise independence. Method: we present a two-step algorithm to mitigate these adverse effects when using singular value thresholding for obtaining gross vasculature images. Our method comprises a morphological-based filtering for removing global and local background signals and a multi-scale Hessian-based vessel enhancement filtering to further improve the vascular structures. We applied our method for in vivo imaging of the microvasculature of kidney in one healthy subject, liver in five healthy subjects, thyroid nodules in five patients, and breast tumors in five patients. Results: singular value thresholding, top-hat filtering and Hessian-based vessel enhancement filtering each provided an average peak-to-side level gain of 1.11dB, 18.55dB and 2.26dB respectively, resulting in an overall gain of 21.92dB when compared to the conventional power Doppler imaging using infinite impulse response filtering. Conclusion: singular value thresholding combined with morphological and Hessian-based vessel enhancement filtering provides a powerful tool for visualization of the deep-seated small vessels using ultrasound echo data without requiring any type of contrast enhancing agents. Significance: this method provides a fast and cost-effective modality for in vivo assessment of the microvasculature suitable for both clinical and preclinical applications.

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KW - Doppler effect

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KW - microvasculature

KW - morphological filtering

KW - singular value decomposition

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KW - Ultrasonic imaging

KW - ultrasound Doppler imaging

KW - vessel filtering

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