TY - JOUR
T1 - Accuracy of microvascular measurements obtained from micro-CT images
AU - Kline, Timothy L.
AU - Zamir, Mair
AU - Ritman, Erik L.
N1 - Funding Information:
The authors would like to thank Mr. Steven M. Jorgensen for scanning the specimens, Mr. Andrew J. Vercnocke for performing image reconstructions, and Ms. Delories C. Darling for her help in the preparation of this manuscript. We would also like to thank the anonymous reviewers for their helpful suggestions. This study was supported in part by NIH Grant EB000305, and The Mayo Foundation. The hand measurements and schematic diagrams, as well as the micro-CT image volumes of specimens h61 and r14 have been made available through our website (Phe-noscope), http://www.mayoresearch.mayo.edu/pirl.
PY - 2010/9
Y1 - 2010/9
N2 - Early changes in branching geometry of microvasculature and its associated impact on the perfusion distribution in diseases, especially those in which different branching generations are affected differently, require the ability to analyze intact vascular trees over a wide range of scales. Micro-CT offers an excellent framework to analyze the microvascular branching geometry. Such an analysis requires methods to be developed that can accurately characterize branching properties, such as branch diameter, length, branching angle, and branch interconnectivity of the microvasculature. The purpose of this article is to report the results of a study of two human intramyocardial coronary vascular tree casts in which the accuracy of micro-CT vascular imaging and its analysis are tested against measurements made through an optical microscope (used as the "gold-standard"). Methods related to image segmentation of the vascular lumen, vessel tree centerline extraction, individual branch segment measurement, and compensating for the non-ideal modulation transfer function of micro-CT scanners are presented. The extracted centerline accurately characterized the hierarchical structure of the vascular tree casts in terms of "parent-branch" relationships which allowed each interbranch segments' dimensions to be compared to the optical measurement method. The comparison results show a close to ideal 1:1 relationship for both length and diameter measurements made by the two methods. Combining the results from both specimens, the standard deviation of the difference between measurement methods was 19 μm for the measurement of interbranch segment diameters (ranging from 12 to 769 μm), and 172 μm for the measurement of interbranch segment lengths (ranging from 14 to 3252 μm). These results suggest that our micro-CT image analysis method can be used to characterize a vascular tree's hierarchical structure, and accurately measure interbranch segment lengths and diameters.
AB - Early changes in branching geometry of microvasculature and its associated impact on the perfusion distribution in diseases, especially those in which different branching generations are affected differently, require the ability to analyze intact vascular trees over a wide range of scales. Micro-CT offers an excellent framework to analyze the microvascular branching geometry. Such an analysis requires methods to be developed that can accurately characterize branching properties, such as branch diameter, length, branching angle, and branch interconnectivity of the microvasculature. The purpose of this article is to report the results of a study of two human intramyocardial coronary vascular tree casts in which the accuracy of micro-CT vascular imaging and its analysis are tested against measurements made through an optical microscope (used as the "gold-standard"). Methods related to image segmentation of the vascular lumen, vessel tree centerline extraction, individual branch segment measurement, and compensating for the non-ideal modulation transfer function of micro-CT scanners are presented. The extracted centerline accurately characterized the hierarchical structure of the vascular tree casts in terms of "parent-branch" relationships which allowed each interbranch segments' dimensions to be compared to the optical measurement method. The comparison results show a close to ideal 1:1 relationship for both length and diameter measurements made by the two methods. Combining the results from both specimens, the standard deviation of the difference between measurement methods was 19 μm for the measurement of interbranch segment diameters (ranging from 12 to 769 μm), and 172 μm for the measurement of interbranch segment lengths (ranging from 14 to 3252 μm). These results suggest that our micro-CT image analysis method can be used to characterize a vascular tree's hierarchical structure, and accurately measure interbranch segment lengths and diameters.
KW - Centerline extraction
KW - Hierarchical descriptor
KW - Modulation transfer function
KW - Point spread function
KW - Vascular branching geometry
KW - Vascular imaging
KW - Vascular tree
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U2 - 10.1007/s10439-010-0058-7
DO - 10.1007/s10439-010-0058-7
M3 - Article
C2 - 20458628
AN - SCOPUS:77956722141
SN - 0090-6964
VL - 38
SP - 2851
EP - 2864
JO - Annals of Biomedical Engineering
JF - Annals of Biomedical Engineering
IS - 9
ER -