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• 2021

  Automated Analysis of Multiparametric Magnetic Resonance Imaging/Magnetic Resonance Elastography Exams for Prediction of Nonalcoholic Steatohepatitis

  Dzyubak, B., Li, J., Chen, J., Mara, K. C., Therneau, T. M., Venkatesh, S. K., Ehman, R. L., Allen, A. M. & Yin, M., Jul 2021, In: Journal of Magnetic Resonance Imaging. 54, 1, p. 122-131 10 p.

  Research output: Contribution to journal › Article › peer-review
  1 Scopus citations

• Automated aneurysm detection: Emerging from the shallow end of the deep learning pool

  Kallmes, D. F. & Erickson, B. J., 2021, In: Radiology. 298, 1, p. 164-165 2 p.

  Research output: Contribution to journal › Editorial › peer-review
  2 Scopus citations

• Automated data-driven mass spectrometry for improved analysis of lipids with dual dissociation techniques

  Byeon, S. K., Madugundu, A. K. & Pandey, A., Nov 2021, In: Journal of Mass Spectrometry and Advances in the Clinical Lab. 22, p. 43-49 7 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Automated Detection of Periprosthetic Joint Infections and Data Elements Using Natural Language Processing

  Fu, S., Wyles, C. C., Osmon, D. R., Carvour, M. L., Sagheb, E., Ramazanian, T., Kremers, W. K., Lewallen, D. G., Berry, D. J., Sohn, S. & Kremers, H. M., Feb 2021, In: Journal of Arthroplasty. 36, 2, p. 688-692 5 p.

  Research output: Contribution to journal › Article › peer-review
  1 Scopus citations

• AUTOMATED MICROFLUIDIC DEVICE FOR WHOLE BLOOD PLASMA SEPARATION AND BIOMARKERS ANALYSIS IN MICROLITER SAMPLES

  Gonzalez-Suarez, A. M., Stybayeva, G., Carey, W. A. & Revzin, A., 2021, MicroTAS 2021 - 25th International Conference on Miniaturized Systems for Chemistry and Life Sciences. Chemical and Biological Microsystems Society, p. 647-648 2 p. (MicroTAS 2021 - 25th International Conference on Miniaturized Systems for Chemistry and Life Sciences).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

• Automated percent mammographic density, mammographic texture variation, and risk of breast cancer: a nested case-control study

  Warner, E. T., Rice, M. S., Zeleznik, O. A., Fowler, E. E., Murthy, D., Vachon, C. M., Bertrand, K. A., Rosner, B. A., Heine, J. & Tamimi, R. M., Dec 2021, In: npj Breast Cancer. 7, 1, 68.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Automated quantitative measures of terminal duct lobular unit involution and breast cancer risk-letter

  Degnim, A. C., Radisky, D. C., Vachon, C. M. & Sherman, M. E., Apr 2021, In: Cancer Epidemiology Biomarkers and Prevention. 30, 4, p. 797 1 p.

  Research output: Contribution to journal › Letter › peer-review

  Open Access

• Automated radiomic analysis of CT images to predict likelihood of spontaneous passage of symptomatic renal stones

  Mohammadinejad, P., Ferrero, A., Bartlett, D. J., Khandelwal, A., Marcus, R., Lieske, J. C., Moen, T. R., Mara, K. C., Enders, F. T., McCollough, C. H. & Fletcher, J. G., Aug 2021, In: Emergency Radiology. 28, 4, p. 781-788 8 p.

  Research output: Contribution to journal › Article › peer-review

• Automated Risk Stratification of Hip Osteoarthritis Development in Patients With Femoroacetabular Impingement Using an Unsupervised Clustering Algorithm: A Study From the Rochester Epidemiology Project

  Ko, S., Pareek, A., Jo, C., Han, H. S., Lee, M. C., Krych, A. J. & Ro, D. H., 2021, In: Orthopaedic Journal of Sports Medicine. 9, 11

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Automated segmentation of endometrial cancer on MR images using deep learning

  Hodneland, E., Dybvik, J. A., Wagner-Larsen, K. S., Šoltészová, V., Munthe-Kaas, A. Z., Fasmer, K. E., Krakstad, C., Lundervold, A., Lundervold, A. S., Salvesen, Ø., Erickson, B. J. & Haldorsen, I., Dec 2021, In: Scientific reports. 11, 1, 179.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Automated Segmentation of the Median Nerve in the Carpal Tunnel using U-Net

  Festen, R. T., Schrier, V. J. M. M. & Amadio, P. C., Jul 2021, In: Ultrasound in Medicine and Biology. 47, 7, p. 1964-1969 6 p.

  Research output: Contribution to journal › Article › peer-review

• Automated total kidney volume measurements in pre-clinical magnetic resonance imaging for resourcing imaging data, annotations, and source code

  Edwards, M. E., Periyanan, S., Anaam, D., Gregory, A. V. & Kline, T. L., Mar 2021, In: Kidney international. 99, 3, p. 763-766 4 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  2 Scopus citations

• Automatic and Reliable Quantification of Tonic Dopamine Concentrations in Vivo Using a Novel Probabilistic Inference Method

  Kim, J., Barath, A. S., Rusheen, A. E., Rojas Cabrera, J. M., Price, J. B., Shin, H., Goyal, A., Yuen, J. W., Jondal, D. E., Blaha, C. D., Lee, K. H., Jang, D. P. & Oh, Y., Mar 16 2021, In: ACS Omega. 6, 10, p. 6607-6613 7 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Automatic Deep Learning Semantic Segmentation of Ultrasound Thyroid Cineclips Using Recurrent Fully Convolutional Networks

  Webb, J. M., Meixner, D. D., Adusei, S. A., Polley, E. C., Fatemi, M. & Alizad, A., 2021, In: IEEE Access. 9, p. 5119-5127 9 p., 9298766.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Automatic Multi-Stain Registration of Whole Slide Images in Histopathology

  Shafique, A., Babaie, M., Sajadi, M., Batten, A., Skdar, S. & Tizhoosh, H. R., 2021, 43rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2021. Institute of Electrical and Electronics Engineers Inc., p. 3622-3625 4 p. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

• Automatic segmentation of the left ventricle in echocardiographic images using convolutional neural networks

  Kim, T., Hedayat, M., Vaitkus, V. V., Belohlavek, M., Krishnamurthy, V. & Borazjani, I., May 2021, In: Quantitative Imaging in Medicine and Surgery. 11, 5, p. 1763-1781 19 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Automatic semantic segmentation of kidney cysts in MR images of patients affected by autosomal-dominant polycystic kidney disease

  Kline, T. L., Edwards, M. E., Fetzer, J., Gregory, A. V., Anaam, D., Metzger, A. J. & Erickson, B. J., Mar 2021, In: Abdominal Radiology. 46, 3, p. 1053-1061 9 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  1 Scopus citations

• Autonomic dysfunction following COVID-19 infection: an early experience

  Shouman, K., Vanichkachorn, G., Cheshire, W. P., Suarez, M. D., Shelly, S., Lamotte, G. J., Sandroni, P., Benarroch, E. E., Berini, S. E., Cutsforth-Gregory, J. K., Coon, E. A., Mauermann, M. L., Low, P. A. & Singer, W., Jun 2021, In: Clinical Autonomic Research. 31, 3, p. 385-394 10 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Autonomic dysfunction in childhood hypersomnia disorders

  Jagadish, S., Singer, W. & Kotagal, S., Feb 2021, In: Sleep Medicine. 78, p. 43-48 6 p.

  Research output: Contribution to journal › Article › peer-review

• Autophagy Is Involved in Mesenchymal Stem Cell Death in Coculture with Chondrocytes

  Paggi, C. A., Dudakovic, A., Fu, Y., Garces, C. G., Hevesi, M., Galeano Garces, D., Dietz, A. B., van Wijnen, A. J. & Karperien, M., Dec 2021, In: Cartilage. 13, 2_suppl, p. 969S-979S

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Autophagy-mediated reduction of miR-345 contributes to hepatic cystogenesis in polycystic liver disease

  Masyuk, T., Masyuk, A., Trussoni, C., Howard, B., Ding, J., Huang, B. & LaRusso, N., Oct 2021, In: JHEP Reports. 3, 5, 100345.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Autosomal-dominant polycystic kidney disease: tolvaptan use in adolescents and young adults with rapid progression

  Raina, R., Chakraborty, R., DeCoy, M. E. & Kline, T., Mar 2021, In: Pediatric Research. 89, 4, p. 894-899 6 p.

  Research output: Contribution to journal › Article › peer-review
  2 Scopus citations

• Avacopan - Time to replace glucocorticoids?

  Warrington, K. J., Feb 18 2021, In: New England Journal of Medicine. 384, 7, p. 664-665 2 p.

  Research output: Contribution to journal › Editorial › peer-review

• A value function-based approach for robust surgery planning

  Bansal, A., Berg, B. P. & Huang, Y. L., Aug 2021, In: Computers and Operations Research. 132, 105313.

  Research output: Contribution to journal › Article › peer-review

• Avascular Necrosis of the Scaphoid-Preiser Disease: Outcomes of 39 Surgical Cases

  Amundsen, A., Oh, C., Huang, T. C. T., Cantwell, S., Hsu, C. C. & Moran, S. L., 2021, (Accepted/In press) In: Journal of Hand Surgery.

  Research output: Contribution to journal › Article › peer-review

• Avelumab in Combination Regimens for Relapsed/Refractory DLBCL: Results from the Phase Ib JAVELIN DLBCL Study

  Hawkes, E. A., Phillips, T., Budde, L. E., Santoro, A., Saba, N. S., Roncolato, F., Gregory, G. P., Verhoef, G., Offner, F., Quero, C., Radford, J., Giannopoulos, K., Stevens, D., Thall, A., Huang, B., Laird, A. D., Sandner, R. & Ansell, S. M., Nov 2021, In: Targeted Oncology. 16, 6, p. 761-771 11 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Avidity observed between a bivalent inhibitor and an enzyme monomer with a single active site

  Lacham-Hartman, S., Shmidov, Y., Radisky, E. S., Bitton, R., Lukatsky, D. B. & Papo, N., Nov 2021, In: PloS one. 16, 11, e0249616.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Avoidable Acute Care Use Associated with Nausea and Vomiting Among Patients Receiving Highly Emetogenic Chemotherapy or Oxaliplatin

  Navari, R. M., Ruddy, K. J., LeBlanc, T. W., Nipp, R., Clark-Snow, R., Schwartzberg, L., Binder, G., Bailey, W. L., Potluri, R., Schmerold, L. M., Papademetriou, E. & Roeland, E. J., Apr 2021, In: Oncologist. 26, 4, p. 325-331 7 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Avoiding the “Faux Equalizer”

  Pritchett, J. C. & Haddad, T. C., Dec 2021, In: Mayo Clinic proceedings. 96, 12, p. 2963-2965 3 p.

  Research output: Contribution to journal › Short survey › peer-review

  Open Access

• Awake minimally invasive transforaminal lumbar interbody fusion with a pedicle-based retraction system

  De Biase, G., Bechtle, P., Leone, B., Quinones-Hinojosa, A. & Abode-Iyamah, K., Jan 2021, In: Clinical Neurology and Neurosurgery. 200, 106313.

  Research output: Contribution to journal › Article › peer-review
  2 Scopus citations

• Awake Robotic Minimally Invasive L4-5 Transforaminal Lumbar Interbody Fusion

  De Biase, G., Chen, S., Akinduro, O., Quinones-Hinojosa, A. & Abode-Iyamah, K., Apr 2021, In: World neurosurgery. 148, p. 93 1 p.

  Research output: Contribution to journal › Article › peer-review
  1 Scopus citations

• A water pill against Alzheimer’s disease

  Li, Z. & Zhao, N., Oct 2021, In: Nature Aging. 1, 10, p. 868-869 2 p.

  Research output: Contribution to journal › Article › peer-review

• A web-based software platform for efficient and quantitative ct image quality assessment and protocol optimization

  Fan, M., Thayib, T., Ren, L., Hsieh, S., McCollough, C., Holmes, D. & Yu, L., 2021, Medical Imaging 2021: Physics of Medical Imaging. Bosmans, H., Zhao, W. & Yu, L. (eds.). SPIE, 1159507. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11595).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

• A weight loss intervention augmented by a wearable device in rural older adults with obesity: A feasibility study

  Batsis, J. A., Petersen, C. L., Clark, M. M., Cook, S. B., Lopez-Jimenez, F., Al-Nimr, R. I., Pidgeon, D., Kotz, D., Mackenzie, T. A. & Bartels, S. J., 2021, In: Journals of Gerontology - Series A Biological Sciences and Medical Sciences. 76, 1, p. 95-100 6 p.

  Research output: Contribution to journal › Article › peer-review
  4 Scopus citations

• A workshop on cognitive aging and impairment in the 9/11-exposed population

  Daniels, R. D., Clouston, S. A. P., Hall, C. B., Anderson, K. R., Bennett, D. A., Bromet, E. J., Calvert, G. M., Carreón, T., Dekosky, S. T., Diminich, E. D., Finch, C. E., Gandy, S., Kreisl, W. C., Kritikos, M., Kubale, T. L., Mielke, M. M., Peskind, E. R., Raskind, M. A., Richards, M., Sano, M., & 6 othersSantiago-Colón, A., Sloan, R. P., Spiro, A., Vasdev, N., Luft, B. J. & Reissman, D. B., Jan 2 2021, In: International journal of environmental research and public health. 18, 2, p. 1-24 24 p., 681.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  2 Scopus citations

• Background parenchymal uptake on molecular breast imaging and breast cancer risk: A cohort study

  Hruska, C. B., Geske, J. R., Conners, A. L., Whaley, D. H., Rhodes, D. J., O'Connor, M. K., Carter, R. E., Scott, C. G. & Vachon, C. M., May 2021, In: American Journal of Roentgenology. 216, 5, p. 1193-1204 12 p.

  Research output: Contribution to journal › Article › peer-review

• Back to the future: The role of metabolic studies in therapeutic advances

  Milliner, D. S. & Lieske, J. C., Dec 2021, In: Journal of the American Society of Nephrology. 32, 12, p. 2980-2982 3 p.

  Research output: Contribution to journal › Editorial › peer-review

  Open Access

• Bacterial Brain Abscess: An Outline for Diagnosis and Management

  Corsini Campioli, C., Castillo Almeida, N. E., O'Horo, J. C., Esquer Garrigos, Z., Wilson, W. R., Cano, E., DeSimone, D. C., Baddour, L. M., Van Gompel, J. J. & Sohail, M. R., Oct 2021, In: American Journal of Medicine. 134, 10, p. 1210-1217.e2

  Research output: Contribution to journal › Review article › peer-review

• BALAD and BALAD-2 predict survival of hepatocellular carcinoma patients: a North American cohort study

  Wongjarupong, N., Negron-Ocasio, G. M., Mara, K. C., Prasai, K., Abdallah, M. A., Ahn, K. S., Yang, J. D., Addissie, B. D., Giama, N. H., Harmsen, W. S., Therneau, T. M. & Roberts, L. R., May 2021, In: HPB. 23, 5, p. 762-769 8 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  1 Scopus citations

• Balloon Aortic Valvuloplasty Followed by Impella®-Assisted Left Main Coronary Artery Percutaneous Coronary Intervention in Patients With Severe Aortic Stenosis as a Bridge to Transcatheter Aortic Valve Replacement

  Diaz Quintero, L., Gajo, E., Guerrero, M., Feldman, T. & Levisay, J., Jan 2021, In: Cardiovascular Revascularization Medicine. 22, p. 16-21 6 p.

  Research output: Contribution to journal › Article › peer-review

• Barrett's Epithelial Thickness, Assessed by Volumetric Laser Endomicroscopy, Is Associated With Response to Radiofrequency Ablation

  Levink, I. J. M., Tearney, G. J., Erler, N. S., Wolfsen, H. C., Siersema, P. D. & Wallace, M. B., Jun 2021, In: Clinical Gastroenterology and Hepatology. 19, 6, p. 1160-1169.e2

  Research output: Contribution to journal › Article › peer-review
  2 Scopus citations

• Barrett's esophagus indefinite for dysplasia carries a definite risk of neoplasia

  Kamboj, A. K. & Leggett, C. L., Aug 2021, In: Gastrointestinal endoscopy. 94, 2, p. 271-272 2 p.

  Research output: Contribution to journal › Editorial › peer-review

• Barriers to identifying and obtaining CME: a national survey of physicians, nurse practitioners and physician assistants

  O’Brien Pott, M., Blanshan, A. S., Huneke, K. M., Baasch Thomas, B. L. & Cook, D. A., Dec 2021, In: BMC medical education. 21, 1, 168.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Barriers to Obtaining a Timely Diagnosis in Human Papillomavirus–Associated Oropharynx Cancer

  Karp, E. E., Yin, L. X., Moore, E. J., Elias, A. J., O’Byrne, T. J., Glasgow, A. E., Habermann, E. B., Price, D. L., Kasperbauer, J. L. & Van Abel, K. M., Aug 2021, In: Otolaryngology - Head and Neck Surgery (United States). 165, 2, p. 300-308 9 p.

  Research output: Contribution to journal › Article › peer-review

• Barriers to Referral to Fellowship-trained Minimally Invasive Gynecologic Surgery Subspecialists

  Delara, R., Misal, M., Yi, J., Girardo, M. & Wasson, M., Apr 2021, In: Journal of Minimally Invasive Gynecology. 28, 4, p. 872-880 9 p.

  Research output: Contribution to journal › Article › peer-review

• Barriers to utilization of three colorectal cancer screening options – Data from a national survey

  Zhu, X., Parks, P. D., Weiser, E., Jacobson, D. J., Limburg, P. J. & Finney Rutten, L. J., Dec 2021, In: Preventive Medicine Reports. 24, 101508.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Basal ganglia calcification in hypoparathyroidism and pseudohypoparathyroidism: local and systemic metabolic mechanisms

  Zavatta, G. & Clarke, B. L., Feb 2021, In: Journal of endocrinological investigation. 44, 2, p. 245-253 9 p.

  Research output: Contribution to journal › Review article › peer-review
  2 Scopus citations

• Basal ganglia calcification is associated with local and systemic metabolic mechanisms in adult hypoparathyroidism

  Zavatta, G., Tebben, P. J., McCollough, C. H., Yu, L., Vrieze, T. & Clarke, B. L., 2021, In: Journal of Clinical Endocrinology and Metabolism. 106, 7, p. 1900-1917 18 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Baseline characteristics of patients with cavernous angiomas with symptomatic hemorrhage in multisite trial readiness project

  Kim, H., Flemming, K. D., Nelson, J. A., Lui, A., Majersik, J. J., Cruz, M. D., Zabramski, J., Trevizo, O., Lanzino, G., Zafar, A., Torbey, M., Mabray, M. C., Robinson, M., Narvid, J., Lupo, J., Thompson, R. E., Hanley, D. F., McBee, N., Treine, K., Ostapkovich, N., & 9 othersStadnik, A., Piedad, K., Hobson, N., Carroll, T., Shkoukani, A., Carrión-Penagos, J., Mendoza-Puccini, C., Koenig, J. I. & Awad, I., Dec 1 2021, In: Stroke. 52, 12, p. 3829-3838 10 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Baseline cognitive impairment in patients with asymptomatic carotid stenosis in the CREST-2 trial

  Lazar, R. M., Wadley, V. G., Myers, T., Jones, M. R., Heck, D. V., Clark, W. M., Marshall, R. S., Howard, V. J., Voeks, J. H., Manly, J. J., Moy, C. S., Chaturvedi, S., Meschia, J. F., Lal, B. K., Brott, T. G. & Howard, G., Dec 1 2021, In: Stroke. 52, 12, p. 3855-3863 9 p.

  Research output: Contribution to journal › Article › peer-review