Find Research Outputs

2019

A comprehensive protocol for multiplatform metabolomics analysis in patient-derived skin fibroblasts

Wilkins, J., Sakrikar, D., Petterson, X. M., Lanza, I. R. & Trushina, E. D., Jun 1 2019, In : Metabolomics. 15, 6, 83.

Research output: Contribution to journalArticle

Metabolomics
Fibroblasts
Metabolites
Skin
Mass Spectrometry
1 Citation (Scopus)

A comprehensive screening of copy number variability in dementia with Lewy bodies

Kun-Rodrigues, C., Orme, T., Carmona, S., Hernandez, D. G., Ross, O. A., Eicher, J. D., Shepherd, C., Parkkinen, L., Darwent, L., Heckman, M. G., Scholz, S. W., Troncoso, J. C., Pletnikova, O., Dawson, T., Rosenthal, L., Ansorge, O., Clarimon, J., Lleo, A., Morenas-Rodriguez, E., Clark, L. & 48 others, Honig, L. S., Marder, K., Lemstra, A., Rogaeva, E., St. George-Hyslop, P., Londos, E., Zetterberg, H., Barber, I., Braae, A., Brown, K., Morgan, K., Troakes, C., Al-Sarraj, S., Lashley, T., Holton, J., Compta, Y., Van Deerlin, V., Serrano, G. E., Beach, T. G., Lesage, S., Galasko, D., Masliah, E., Santana, I., Pastor, P., Diez-Fairen, M., Aguilar, M., Tienari, P. J., Myllykangas, L., Oinas, M., Revesz, T., Lees, A., Boeve, B. F., Petersen, R. C., Ferman, T. J., Escott-Price, V., Graff Radford, N. R., Cairns, N. J., Morris, J. C., Pickering-Brown, S., Mann, D., Halliday, G. M., Hardy, J., Trojanowski, J. Q., Dickson, D. W., Singleton, A., Stone, D. J., Guerreiro, R. & Bras, J., Mar 1 2019, In : Neurobiology of Aging. 75, p. 223.e1-223.e10

Research output: Contribution to journalArticle

Lewy Body Disease
Genome
Neurodegenerative Diseases
Genes
Dementia

A Computationally Efficient Model for Predicting Successful Memory Encoding Using Machine-Learning-based EEG Channel Selection

Saboo, K. V., Varatharajah, Y., Berry, B. M., Sperling, M. R., Gorniak, R., Davis, K. A., Jobst, B. C., Gross, R. E., Lega, B., Sheth, S. A., Kahana, M. J., Kucewicz, M. T., Worrell, G. A. & Iyer, R. K., May 16 2019, 9th International IEEE EMBS Conference on Neural Engineering, NER 2019. IEEE Computer Society, p. 323-327 5 p. 8717057. (International IEEE/EMBS Conference on Neural Engineering, NER; vol. 2019-March).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Electroencephalography
Learning systems
Data storage equipment
Electrodes
Set theory
3 Citations (Scopus)

A consensus redefinition of transfusion-related acute lung injury

Vlaar, A. P. J., Toy, P., Fung, M., Looney, M. R., Juffermans, N. P., Bux, J., Bolton-Maggs, P., Peters, A. L., Silliman, C. C., Kor, D. J. & Kleinman, S., Jan 1 2019, In : Transfusion.

Research output: Contribution to journalArticle

Open Access
Acute Lung Injury
Adult Respiratory Distress Syndrome
Terminology
Pulmonary Edema
Developed Countries

Acoustoelasticity Analysis of Transient Waves for Non-Invasive In Vivo Assessment of Urinary Bladder

Bayat, M., Adabi, S., Kumar, V., Gregory, A., Webb, J., Denis, M., Kim, B., Singh, A., Mynderse, L., Husmann, D., Alizad, A. & Fatemi, M., Dec 1 2019, In : Scientific reports. 9, 1, 2441.

Research output: Contribution to journalArticle

Open Access
Urinary Bladder
Elasticity
Neurogenic Urinary Bladder
Elastic Modulus
Fourier Analysis

Acquired monocular nystagmus in chiasmal glioma—a video-oculographic study

Brodsky, M. C. & Torrado, L. A., Jan 1 2019, In : Journal of AAPOS.

Research output: Contribution to journalArticle

Infantile Spasms
Glioma
Torticollis
Head
1 Citation (Scopus)

Acquisition, Processing and Analysis of Electrocardiogram in Awake Zebrafish

Le, T., Lenning, M., Clark, I., Bhimani, I., Fortunato, J., Marsh, P., Xu, X. H. & Cao, H., Jun 1 2019, In : IEEE Sensors Journal. 19, 11, p. 4283-4289 7 p., 8636511.

Research output: Contribution to journalArticle

electrocardiography
Electrocardiography
acquisition
drugs
electrophysiology

Acquisition of Early Developmental Milestones and Need for Special Education Services in Pediatric Multiple Sclerosis

Aaen, G., Waltz, M., Vargas, W., Makhani, N., Ness, J., Harris, Y., Casper, T. C., Benson, L., Candee, M., Chitnis, T., Gorman, M., Graves, J., Greenberg, B., Lotze, T., Mar, S., Tillema, J-M., Rensel, M., Rodriguez, M., Rose, J., Rubin, J. & 6 others, Schreiner, T., Waldman, A., Weinstock-Guttman, B., Belman, A., Waubant, E. & Krupp, L., Mar 1 2019, In : Journal of Child Neurology. 34, 3, p. 148-152 5 p.

Research output: Contribution to journalArticle

Special Education
Multiple Sclerosis
Pediatrics
Walking
Motor Skills

A Critical Evaluation of Current Concepts in Cerebral Palsy

Brandenburg, J. E., Fogarty, M. J. & Sieck, G. C., May 1 2019, In : Physiology (Bethesda, Md.). 34, 3, p. 216-229 14 p.

Research output: Contribution to journalArticle

Cerebral Palsy
Animal Models
Brain
Names
Spinal Cord
3 Citations (Scopus)

A critique of the second consensus criteria for multiple system atrophy

on behalf of the Movement Disorder Society Multiple System Atrophy Study Group, Jan 1 2019, In : Movement Disorders.

Research output: Contribution to journalArticle

Multiple System Atrophy

Across the Pons and to the Milky Way: Where are the neuroradiology publications?

Lehman, V. T., Jan 1 2019, In : American Journal of Neuroradiology. 40, 5, p. E22-E23

Research output: Contribution to journalLetter

Pons
Publications

ACR Ultrasound Liver Reporting and Data System: Multicenter Assessment of Clinical Performance at One Year

Millet, J. D., Kamaya, A., Choi, H. H., Dahiya, N., Murphy, P. M., Naveed, M. Z., O'Boyle, M., Parra, L. A., Perez, M. G., Pirmoazen, A. M., Rodgers, S. K., Wasnik, A. P. & Maturen, K. E., Jan 1 2019, In : Journal of the American College of Radiology.

Research output: Contribution to journalArticle

Information Systems
Liver
Hepatocellular Carcinoma
Virus Diseases
Observation

ACTA1-myopathy with prominent finger flexor weakness and rimmed vacuoles

Liewluck, T., Niu, Z., Moore, S. A., Alsharabati, M. & Milone, M., Jan 1 2019, In : Neuromuscular Disorders.

Research output: Contribution to journalArticle

Muscular Diseases
Vacuoles
Nuclear Family
Fathers
Fingers

Active compression garment prevents tilt-induced orthostatic tachycardia in humans

Kelly, K. L., Johnson, C. P., Dunne, L. E., Holschuh, B., Joyner, M. J. & Johnson, B. D., Apr 1 2019, In : Physiological reports. 7, 7, e14050.

Research output: Contribution to journalArticle

Open Access
Clothing
Tachycardia
Arterial Pressure
Heart Rate
Orthostatic Intolerance
2 Citations (Scopus)

Activity of EGFR antibody in non-V600 BRAF mutant metastatic colorectal cancer

Wang, Y., Jones, J. C., Kipp, B. R. & Grothey, A. F., Jan 1 2019, In : Annals of oncology : official journal of the European Society for Medical Oncology. 30, 1, p. 147-149 3 p.

Research output: Contribution to journalArticle

Colorectal Neoplasms
Antibodies

Acute leukemias harboring KMT2A/MLLT10 fusion: a 10-year experience from a single genomics laboratory

Peterson, J. F., Sukov, W. R., Pitel, B. A., Smoley, S. A., Pearce, K. E., Meyer, R. G., Williamson, C. M., Smadbeck, J. B., Vasmatzis, G., Hoppman, N. L., Greipp, P. T., Baughn, L. & Ketterling, R. P., Jan 1 2019, In : Genes Chromosomes and Cancer.

Research output: Contribution to journalArticle

Genomics
Leukemia
Fluorescence In Situ Hybridization
Acute Myeloid Leukemia
Precursor Cell Lymphoblastic Leukemia-Lymphoma
5 Citations (Scopus)

Acute Noncardiac Organ Failure in Acute Myocardial Infarction With Cardiogenic Shock

Vallabhajosyula, S., Dunlay, S. M., Prasad, A., Kashani, K., Sakhuja, A., Gersh, B. J., Jaffe, A. S., Holmes, D. R. & Barsness, G. W., Apr 16 2019, In : Journal of the American College of Cardiology. 73, 14, p. 1781-1791 11 p.

Research output: Contribution to journalArticle

Cardiogenic Shock
Hospital Mortality
Myocardial Infarction
Odds Ratio
Confidence Intervals

Acute pancreatitis associated with intravenous administration of propofol: Evaluation of causality in a systematic review of the literature

Haffar, S., Kaur, R. J., Garg, S. K., Hyder, J. A., Murad, M. H., Abu Dayyeh, B. K. & Bazerbachi, F., Feb 1 2019, In : Gastroenterology Report. 7, 1, p. 13-23 11 p.

Research output: Contribution to journalReview article

Open Access
Propofol
Causality
Pancreatitis
Intravenous Administration
Mortality

Acute pancreatitis in end-stage renal disease patients in the USA: A nationwide, propensity score-matched analysis

Cheungpasitporn, W., Thongprayoon, C., Ungprasert, P., Wijarnpreecha, K., Raimondo, M. & Kroner, P. T., Aug 1 2019, In : European Journal of Gastroenterology and Hepatology. 31, 8, p. 968-972 5 p.

Research output: Contribution to journalArticle

Propensity Score
Pancreatitis
Chronic Kidney Failure
Kidney
Inpatients

Acute renal failure due to bilateral renal vein thromboses: A rare complication of heparin-induced thrombocytopenia

Klompas, A., Albright, R., Maltais, S. & Demirci, O., Apr 1 2019, In : Annals of cardiac anaesthesia. 22, 2, p. 204-206 3 p.

Research output: Contribution to journalArticle

Open Access
Renal Veins
Acute Kidney Injury
Thrombocytopenia
Heparin
Thrombosis
4 Citations (Scopus)

ADAR2 mislocalization and widespread RNA editing aberrations in C9orf72-mediated ALS/FTD

Moore, S., Alsop, E., Lorenzini, I., Starr, A., Rabichow, B. E., Mendez, E., Levy, J. L., Burciu, C., Reiman, R., Chew, J., Belzil, V. V., W. Dickson, D., Robertson, J., Staats, K. A., Ichida, J. K., Petrucelli, L., Van Keuren-Jensen, K. & Sattler, R., Jan 1 2019, In : Acta neuropathologica.

Research output: Contribution to journalArticle

RNA Editing
Adenosine Deaminase
RNA
Amyotrophic Lateral Sclerosis
Eukaryotic Initiation Factor-2

Added value of exercise test findings beyond traditional risk factors for cardiovascular risk stratification

Bonikowske, A. R., Lopez-Jimenez, F., Barillas-Lara, M. I., Barout, A., Fortin-Gamero, S., Sydo, N. & Allison, T. G., Jan 1 2019, In : International Journal of Cardiology.

Research output: Contribution to journalArticle

Exercise Test
Exercise
Mortality
Cardiovascular Abnormalities
Cardiovascular Diseases
1 Citation (Scopus)

Addressing the diagnostic gaps in pyruvate kinase deficiency: Consensus recommendations on the diagnosis of pyruvate kinase deficiency

with the endorsement of EuroBloodNet, the European Reference Network in Rare Hematological Diseases, Jan 1 2019, In : American Journal of Hematology. 94, 1, p. 149-161 13 p.

Research output: Contribution to journalArticle

Congenital Hemolytic Anemia
Workflow
Enzyme Assays
Glycolysis
Pyruvate Kinase Deficiency of Red Cells

A deep learning- and partial least square regression-based model observer for a low-contrast lesion detection task in CT

Gong, H., Yu, L., Leng, S., Dilger, S. K., Ren, L., Zhou, W., Fletcher, J. G. & McCollough, C. H., Jan 1 2019, In : Medical physics.

Research output: Contribution to journalArticle

Least-Squares Analysis
Learning
Noise
Liver
Radiation

A deep learning-based approach to reduce rescan and recall rates in clinical MRI examinations

Sreekumari, A., Shanbhag, D., Yeo, D., Foo, T., Pilitsis, J., Polzin, J., Patil, U., Coblentz, A., Kapadia, A., Khinda, J., Boutet, A., Port, J. D. & Hancu, I., Feb 1 2019, In : American Journal of Neuroradiology. 40, 2, p. 217-223 7 p.

Research output: Contribution to journalArticle

Learning
Reading
Stroke
Artifacts
Multiple Sclerosis

Adenosine Triphosphate Production of Muscle Mitochondria after Acute Exercise in Lean and Obese Humans

Kras, K. A., Hoffman, N., Roust, L. R., Benjamin, T. R., De Filippis, E. A. & Katsanos, C. S., Mar 1 2019, In : Medicine and Science in Sports and Exercise. 51, 3, p. 445-453 9 p.

Research output: Contribution to journalArticle

Muscle Mitochondrion
Mitochondria
Adenosine Triphosphate
Exercise
Obesity

ADEpedia-on-OHDSI: A next generation pharmacovigilance signal detection platform using the OHDSI common data model

Yu, Y., Ruddy, K. J., Hong, N., Tsuji, S., Wen, A., Shah, N. D. & Jiang, G. D., Mar 1 2019, In : Journal of Biomedical Informatics. 91, 103119.

Research output: Contribution to journalArticle

Pharmacovigilance
Informatics
Signal detection
Data structures
Health
2 Citations (Scopus)

Adherence of cell-free DNA noninvasive prenatal screens to ACMG recommendations

Skotko, B. G., Allyse, M., Bajaj, K., Best, R. G., Klugman, S., Leach, M., Meredith, S., Michie, M., Stoll, K. & Gregg, A. R., Jan 1 2019, In : Genetics in Medicine.

Research output: Contribution to journalArticle

Medical Genetics
Genomics
Aneuploidy
DNA
Prenatal Diagnosis
Mesenchymal Stromal Cells
Allografts
Schwann Cells
Cell Survival
Sciatic Nerve

Adipose-derived cellular and cell-derived regenerative therapies in dermatology and aesthetic rejuvenation

Suh, A., Pham, A., Cress, M. J., Pincelli, T., TerKonda, S. P., Bruce, A., Zubair, A., Wolfram, J. & Shapiro, S. A., Sep 1 2019, In : Ageing Research Reviews. 54, 100933.

Research output: Contribution to journalReview article

Dermatology
Rejuvenation
Esthetics
Tissue
Cellular Structures
12 Citations (Scopus)

Adjuvant Anti-HER2 Therapy, Treatment-Related Amenorrhea, and Survival in Premenopausal HER2-Positive Early Breast Cancer Patients

Lambertini, M., Campbell, C., Bines, J., Korde, L. A., Izquierdo, M., Fumagalli, D., Del Mastro, L., Ignatiadis, M., Pritchard, K., Wolff, A. C., Jackisch, C., Lang, I., Untch, M., Smith, I., Boyle, F., Xu, B., Barrios, C. H., Baselga, J., Moreno Aspitia, A., Piccart, M. & 2 others, Gelber, R. D. & de Azambuja, E., Jan 1 2019, In : Journal of the National Cancer Institute. 111, 1, p. 86-94 9 p.

Research output: Contribution to journalArticle

Amenorrhea
Breast Neoplasms
Survival
Hormones
Therapeutics
1 Citation (Scopus)

Adjuvant Therapy for Resected Biliary Tract Cancer: ASCO Clinical Practice Guideline

Shroff, R. T., Kennedy, E. B., Bachini, M., Bekaii-Saab, T., Crane, C., Edeline, J., El-Khoueiry, A., Feng, M., Katz, M. H. G., Primrose, J., Soares, H. P., Valle, J. & Maithel, S. K., Apr 20 2019, In : Journal of clinical oncology : official journal of the American Society of Clinical Oncology. 37, 12, p. 1015-1027 13 p.

Research output: Contribution to journalArticle

Biliary Tract Neoplasms
Practice Guidelines
Gallbladder Neoplasms
Cholangiocarcinoma
Randomized Controlled Trials

Adjuvant Therapy in High-Risk Renal Cell Cancer: A Systematic Review and Meta-analysis

Riaz, I. B., Faridi, W., Husnain, M., Malik, S. U., Sipra, Q. U. A. R., Gondal, F. R., Xie, H., Yadav, S. & Kohli, M., Aug 1 2019, In : Mayo Clinic proceedings. 94, 8, p. 1524-1534 11 p.

Research output: Contribution to journalArticle

Renal Cell Carcinoma
Meta-Analysis
Disease-Free Survival
Therapeutics
Randomized Controlled Trials

Admixture mapping reveals evidence of differential multiple sclerosis risk by genetic ancestry

Chi, C., Shao, X., Rhead, B., Gonzales, E., Smith, J. B., Xiang, A. H., Graves, J., Waldman, A., Lotze, T., Schreiner, T., Weinstock-Guttman, B., Aaen, G., Tillema, J-M., Ness, J., Candee, M., Krupp, L., Gorman, M., Benson, L., Chitnis, T., Mar, S. & 13 others, Belman, A., Casper, T. C., Rose, J., Moodley, M., Rensel, M., Rodriguez, M., Greenberg, B., Kahn, L., Rubin, J., Schaefer, C., Waubant, E., Langer-Gould, A. & Barcellos, L. F., Jan 1 2019, In : PLoS Genetics. 15, 1, p. e1007808

Research output: Contribution to journalArticle

sclerosis
antigen
ancestry
Multiple Sclerosis
allele
Anthracyclines
Cardiomyopathies
Doxorubicin
RNA-Binding Proteins
Hematologic Neoplasms
Mammography
Learning systems
cancer
Breast Neoplasms
diagnostic
4 Citations (Scopus)

Adult Outpatients With Acute Cough Due to Suspected Pneumonia or Influenza: CHEST Guideline and Expert Panel Report

CHEST Expert Cough Panel, Jan 1 2019, In : Chest. 155, 1, p. 155-167 13 p.

Research output: Contribution to journalArticle

Cough
Human Influenza
Pneumonia
Outpatients
Guidelines

Advances in Biomaterials and Technologies for Vascular Embolization

Hu, J., Albadawi, H., Chong, B. W., Deipolyi, A. R., Sheth, R. A., Khademhosseini, A. & Oklu, R., Jan 1 2019, In : Advanced Materials. 1901071.

Research output: Contribution to journalReview article

Biocompatible Materials
Biomaterials
Biodegradable polymers
Radiology
Blood vessels
1 Citation (Scopus)

Advances in multidisciplinary therapy for meningiomas

International Consortium on Meningiomas, Jan 14 2019, In : Neuro-Oncology. 21, 1, p. i18-i31

Research output: Contribution to journalArticle

Meningioma
trabectedin
Therapeutics
Radiotherapy
Focal Adhesion Protein-Tyrosine Kinases

Advances in the diagnosis and surveillance of Barrett's esophagus (with videos)

The ASGE Technology Committee, Jan 1 2019, In : Gastrointestinal endoscopy.

Research output: Contribution to journalArticle

Barrett Esophagus
Technology
Biomarkers
Adenocarcinoma
Fluorescence In Situ Hybridization

Advancing the Science of E-Visits in Primary Care

Habermann, E. B., Jun 1 2019, In : Mayo Clinic proceedings. 94, 6, p. 939-941 3 p.

Research output: Contribution to journalEditorial

Open Access
Primary Health Care

Adverse Drug Reactions to Guideline-Recommended Heart Failure Drugs in Women: A Systematic Review of the Literature

Bots, S. H., Groepenhoff, F., Eikendal, A. L. M., Tannenbaum, C., Rochon, P. A., Regitz-Zagrosek, V., Miller, V. M., Day, D., Asselbergs, F. W. & den Ruijter, H. M., Mar 1 2019, In : JACC: Heart Failure. 7, 3, p. 258-266 9 p.

Research output: Contribution to journalArticle

Open Access
Drug-Related Side Effects and Adverse Reactions
Heart Failure
Guidelines
Pharmaceutical Preparations
ivabradine

AFM study: Cell cycle and probe geometry influences nanomechanical characterization of Panc1 cells

Kulkarni, T., Tam, A., Mukhopadhyay, D. & Bhattacharya, S., May 1 2019, In : Biochimica et Biophysica Acta - General Subjects. 1863, 5, p. 802-812 11 p.

Research output: Contribution to journalArticle

Cell Cycle
Microscopes
Cells
Geometry
Cell Cycle Resting Phase

A Focus Group Study on African American Living Donors’ Treatment Preferences, Sociocultural Factors, and Health Beliefs About Apolipoprotein L1 Genetic Testing

Gordon, E. J., Amórtegui, D., Blancas, I., Wicklund, C., Friedewald, J. & Sharp, R. R., Jan 1 2019, In : Progress in Transplantation.

Research output: Contribution to journalArticle

Apolipoproteins
Living Donors
Genetic Testing
Focus Groups
African Americans
1 Citation (Scopus)
Serology
Practice Guidelines
Abdomen
Celiac Disease
Immunoglobulin A
3 Citations (Scopus)

AGA Clinical Practice Update on Surgical Risk Assessment and Perioperative Management in Cirrhosis: Expert Review

Northup, P. G., Friedman, L. S. & Kamath, P. S., Mar 1 2019, In : Clinical Gastroenterology and Hepatology. 17, 4, p. 595-606 12 p.

Research output: Contribution to journalReview article

Fibrosis

Age, race and viral genotype are associated with the prevalence of hepatitis B e antigen in children and adults with chronic hepatitis B

the Hepatitis B Research Network (HBRN), Jul 1 2019, In : Journal of viral hepatitis. 26, 7, p. 856-865 10 p.

Research output: Contribution to journalArticle

Hepatitis B e Antigens
Chronic Hepatitis B
Genotype
Hepatitis B virus
Virus Diseases
5 Citations (Scopus)

Aged-senescent cells contribute to impaired heart regeneration

Lewis-McDougall, F. C., Ruchaya, P. J., Domenjo-Vila, E., Shin Teoh, T., Prata, L., Cottle, B. J., Clark, J. E., Punjabi, P. P., Awad, W., Torella, D., Tchkonia, T., Kirkland, J. L. & Ellison-Hughes, G. M., Jun 1 2019, In : Aging Cell. 18, 3, e12931.

Research output: Contribution to journalArticle

Open Access
Regeneration
Stem Cells
Cell Aging
Phenotype
Cyclin-Dependent Kinase Inhibitor p16
1 Citation (Scopus)

A Human iPSC-derived 3D platform using primary brain cancer cells to study drug development and personalized medicine

Plummer, S., Wallace, S., Ball, G., Lloyd, R., Schiapparelli, P., Quinones-Hinojosa, A., Hartung, T. & Pamies, D., Dec 1 2019, In : Scientific reports. 9, 1, 1407.

Research output: Contribution to journalArticle

Open Access
temozolomide
Precision Medicine
Glioblastoma
Brain Neoplasms
Doxorubicin
1 Citation (Scopus)

A human organotypic microfluidic tumor model permits investigation of the interplay between patient-derived fibroblasts and breast cancer cells

Truong, D. D., Kratz, A., Park, J. G., Barrientos, E. S., Saini, H., Nguyen, T., Pockaj, B. A., Mouneimne, G., LaBaer, J. & Nikkhah, M., Jun 15 2019, In : Cancer Research. 79, 12, p. 3139-3151 13 p.

Research output: Contribution to journalArticle

Microfluidics
Fibroblasts
Breast Neoplasms
Neoplasms
Glycoproteins