• 17116 Citations
  • 56 Scopus h-Index
1987 …2020

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Article
2020

Alterations of the Rectal Microbiome Are Associated with the Development of Postoperative Ileus in Patients Undergoing Colorectal Surgery

Shogan, B. D., Chen, J., Duchalais, E., Collins, D., Chang, M., Krull, K., Krezalek, M. A., Larson, D. W., Walther-Antonio, M. R., Chia, N. & Nelson, H., Jul 1 2020, In : Journal of Gastrointestinal Surgery. 24, 7, p. 1663-1672 10 p.

Research output: Contribution to journalArticle

Core genome MLST and resistome analysis of Klebsiella pneumoniae using a clinically amenable workflow

the Antibacterial Resistance Leadership Group, May 2020, In : Diagnostic Microbiology and Infectious Disease. 97, 1, 114996.

Research output: Contribution to journalArticle

1 Scopus citations

NASA-Task Load Index Differentiates Surgical Approach: Opportunities for Improvement in Colon and Rectal Surgery

Law, K. E., Lowndes, B. R., Kelley, S. R., Blocker, R., Larson, D. W., Hallbeck, S. & Nelson, H., May 1 2020, In : Annals of surgery. 271, 5, p. 906-912 7 p.

Research output: Contribution to journalArticle

7 Scopus citations

NASA-TLX Assessment of Surgeon Workload Variation across Specialties

Lowndes, B. R., Forsyth, K. L., Blocker, R. C., Dean, P. G., Truty, M. J., Heller, S. F., Blackmon, S., Hallbeck, M. S. & Nelson, H., Apr 1 2020, In : Annals of surgery. 271, 4, p. 686-692 7 p.

Research output: Contribution to journalArticle

Open Access
10 Scopus citations

Surgeon Workload in Colorectal Surgery: Perceived Drivers of Procedural Difficulty

Law, K. E., Lowndes, B. R., Kelley, S. R., Blocker, R. C., Larson, D. W., Hallbeck, M. S. & Nelson, H., Jan 2020, In : Journal of Surgical Research. 245, p. 57-63 7 p.

Research output: Contribution to journalArticle

Workload Differentiates Breast Surgical Procedures: NSM Associated with Higher Workload Demand than SSM

Hallbeck, M. S., Law, K. E., Lowndes, B. R., Linden, A. R., Morrow, M., Blocker, R. C., Cain, S. M., Degnim, A. C., Hieken, T. J., Jakub, J. W., Racz, J. M., Farley, D. R., Nelson, H. & Boughey, J. C., May 1 2020, In : Annals of surgical oncology. 27, 5, p. 1318-1326 9 p.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations
2019

An Increased Abundance of Clostridiaceae Characterizes Arthritis in Inflammatory Bowel Disease and Rheumatoid Arthritis: A Cross-sectional Study

Muñiz Pedrogo, D. A., Chen, J., Hillmann, B., Jeraldo, P., Al-Ghalith, G., Taneja, V., Davis, J. M., Knights, D., Nelson, H., Faubion, W. A., Raffals, L. & Kashyap, P. C., Apr 11 2019, In : Inflammatory bowel diseases. 25, 5, p. 902-913 12 p.

Research output: Contribution to journalArticle

7 Scopus citations

Assessment of a Personalized Approach to Predicting Postprandial Glycemic Responses to Food Among Individuals Without Diabetes

Mendes-Soares, H., Raveh-Sadka, T., Azulay, S., Edens, K., Ben-Shlomo, Y., Cohen, Y., Ofek, T., Bachrach, D., Stevens, J., Colibaseanu, D., Segal, L., Kashyap, P. & Nelson, H., Feb 1 2019, In : JAMA Network Open. 2, 2, p. e188102

Research output: Contribution to journalArticle

Open Access
23 Scopus citations

Comparative Age-Based Prospective Multi-Institutional Observations of 12,367 Patients Enrolled to the American College of Surgeons Oncology Group (ACOSOG) Z901101 Trials (Alliance)

Al-Refaie, W. B., Decker, P. A., Ballman, K. V., Pisters, P. W. T., Posner, M. C., Hunt, K. K., Meyers, B., Weinberg, A. D., Nelson, H., Newman, L., Tan, A., Le-Rademacher, J. G., Hurria, A. & Jatoi, A., Dec 1 2019, In : Annals of surgical oncology. 26, 13, p. 4213-4221 9 p.

Research output: Contribution to journalArticle

Comparison of Outcomes in Oncoplastic Pelvic Reconstruction with VRAM versus Omental Flaps: A Large Cohort Analysis

Chaudhry, A., Oliver, J. D., Vyas, K. S., Tran, N. V., Martinez-Jorge, J., Larson, D., Dozois, E., Nelson, H. & Manrique, O. J., Jan 1 2019, In : Journal of Reconstructive Microsurgery. 35, 6, p. 425-429 5 p.

Research output: Contribution to journalArticle

3 Scopus citations

Disease-free Survival and Local Recurrence for Laparoscopic Resection Compared With Open Resection of Stage II to III Rectal Cancer: Follow-up Results of the ACOSOG Z6051 Randomized Controlled Trial

Fleshman, J., Branda, M. E., Sargent, D. J., Boller, A. M., George, V. V., Abbas, M. A., Peters, W. R., Maun, D. C., Chang, G. J., Herline, A., Fichera, A., Mutch, M. G., Wexner, S. D., Whiteford, M. H., Marks, J., Birnbaum, E., Margolin, D. A., Larson, D. W., Marcello, P. W., Posner, M. C. & 5 others, Read, T. E., Monson, J. R. T., Wren, S. M., Pisters, P. W. T. & Nelson, H., Apr 1 2019, In : Annals of surgery. 269, 4, p. 589-595 7 p.

Research output: Contribution to journalArticle

66 Scopus citations
2 Scopus citations

Incident Cases Captured in the National Cancer Database Compared with Those in U.S. Population Based Central Cancer Registries in 2012–2014

Mallin, K., Browner, A., Palis, B., Gay, G., McCabe, R., Nogueira, L., Yabroff, R., Shulman, L., Facktor, M., Winchester, D. P. & Nelson, H., Jun 15 2019, In : Annals of surgical oncology. 26, 6, p. 1604-1612 9 p.

Research output: Contribution to journalArticle

33 Scopus citations

Model of personalized postprandial glycemic response to food developed for an Israeli cohort predicts responses in Midwestern American individuals

Mendes-Soares, H., Raveh-Sadka, T., Azulay, S., Ben-Shlomo, Y., Cohen, Y., Ofek, T., Stevens, J., Bachrach, D., Kashyap, P., Segal, L. & Nelson, H., Jul 1 2019, In : American Journal of Clinical Nutrition. 110, 1, p. 63-75 13 p., nzq028.

Research output: Contribution to journalArticle

Open Access
7 Scopus citations

Postmenopause as a key factor in the composition of the Endometrial Cancer Microbiome (ECbiome)

Walsh, D. M., Hokenstad, A. N., Chen, J., Sung, J., Jenkins, G. D., Chia, N., Nelson, H., Mariani, A. & Walther-Antonio, M. R. S., Dec 1 2019, In : Scientific reports. 9, 1, 19213.

Research output: Contribution to journalArticle

Open Access
3 Scopus citations

Reproducibility, stability, and accuracy of microbial profiles by fecal sample collection method in three distinct populations

Byrd, D. A., Chen, J., Vogtmann, E., Hullings, A., Song, S. J., Amir, A., Kibriya, M. G., Ahsan, H., Chen, Y., Nelson, H., Knight, R., Shi, J., Chia, N. & Sinha, R., Nov 1 2019, In : PloS one. 14, 11, e0224757.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

The Practice of Overlapping Colorectal Operations in a Tertiary Care Center Is Safe: A Model for Advancing Team-based Care

Shogan, B. D., Harmsen, W. S., Dozois, E. J., Nelson, H. & Larson, D. W., Aug 1 2019, In : Annals of surgery. 270, 2, p. 322-326 5 p.

Research output: Contribution to journalArticle

1 Scopus citations
2018

Clostridioides difficile uses amino acids associated with gut microbial dysbiosis in a subset of patients with diarrhea

Battaglioli, E. J., Hale, V. L., Chen, J., Jeraldo, P., Ruiz-Mojica, C., Schmidt, B. A., Rekdal, V. M., Till, L. M., Huq, L., Smits, S. A., Moor, W. J., Jones-Hall, Y., Smyrk, T., Khanna, S., Pardi, D. S., Grover, M., Patel, R., Chia, N., Nelson, H., Sonnenburg, J. L. & 2 others, Farrugia, G. & Kashyap, P. C., Oct 24 2018, In : Science translational medicine. 10, 464, eaam7019.

Research output: Contribution to journalArticle

25 Scopus citations

Distinct microbes, metabolites, and ecologies define the microbiome in deficient and proficient mismatch repair colorectal cancers

Hale, V. L., Jeraldo, P., Chen, J., Mundy, M., Yao, J., Priya, S., Keeney, G., Lyke, K., Ridlon, J., White, B. A., French, A. J., Thibodeau, S. N., Diener, C., Resendis-Antonio, O., Gransee, J., Dutta, T., Petterson, X. M., Sung, J., Blekhman, R., Boardman, L. & 3 others, Larson, D., Nelson, H. & Chia, N., Oct 31 2018, In : Genome medicine. 10, 1, 78.

Research output: Contribution to journalArticle

28 Scopus citations
2 Scopus citations

Synthesis of multi-omic data and community metabolic models reveals insights into the role of hydrogen sulfide in colon cancer

Hale, V. L., Jeraldo, P., Mundy, M., Yao, J., Keeney, G., Scott, N., Cheek, E. H., Davidson, J., Green, M., Martinez, C., Lehman, J., Pettry, C., Reed, E., Lyke, K., White, B. A., Diener, C., Resendis-Antonio, O., Gransee, J., Dutta, T., Petterson, X. M. & 4 others, Boardman, L. A., Larson, D., Nelson, H. & Chia, N. D., Jan 1 2018, (Accepted/In press) In : Methods.

Research output: Contribution to journalArticle

9 Scopus citations

Whole-genome sequencing for methicillin-resistant Staphylococcus aureus (MRSA) outbreak investigation in a neonatal intensive care unit

Madigan, T., Cunningham, S. A., Patel, R., Greenwood-Quaintance, K. E., Barth, J. E., Sampathkumar, P., Cole, N. C., Kohner, P. C., Colby, C. E., Asay, G. F., Fang, J. L., Baker, C. A., Heinrich, A. L., Fjerstad, K. A., Lujero, M. J., Chia, N. D., Jeraldo, P. R., Nelson, H. & Huskins, W. C., Jan 1 2018, (Accepted/In press) In : Infection Control and Hospital Epidemiology.

Research output: Contribution to journalArticle

3 Scopus citations
2017

A comprehensive analysis of breast cancer microbiota and host gene expression

Thompson, K. J., Ingle, J. N., Tang, X., Chia, N., Jeraldo, P. R., Walther-Antonio, M. R., Kandimalla, K. K., Johnson, S., Yao, J. Z., Harrington, S. C., Suman, V. J., Wang, L., Weinshilboum, R. L., Boughey, J. C., Kocher, J. P., Nelson, H., Goetz, M. P. & Kalari, K. R., Nov 2017, In : PloS one. 12, 11, e0188873.

Research output: Contribution to journalArticle

20 Scopus citations

Changes in microbial ecology after fecal microbiota transplantation for recurrent C. difficile infection affected by underlying inflammatory bowel disease

Khanna, S., Vazquez-Baeza, Y., González, A., Weiss, S., Schmidt, B., Muñiz-Pedrogo, D. A., Rainey, J. F., Kammer, P., Nelson, H., Sadowsky, M., Khoruts, A., Farrugia, S. L., Knight, R., Pardi, D. S. & Kashyap, P. C., 2017, In : Microbiome. 5, 1, 55.

Research output: Contribution to journalArticle

Open Access
40 Scopus citations

Comparison of Collection Methods for Fecal Samples in Microbiome Studies

Vogtmann, E., Chen, J., Amir, A., Shi, J., Abnet, C. C., Nelson, H., Knight, R., Chia, N. & Sinha, R., Jan 15 2017, In : American journal of epidemiology. 185, 2, p. 115-123 9 p.

Research output: Contribution to journalArticle

51 Scopus citations

Comparison of fecal collection methods for microbiota studies in Bangladesh

Vogtmann, E., Chen, J., Kibriya, M. G., Chen, Y., Islam, T., Eunes, M., Ahmed, A., Naher, J., Rahman, A., Amir, A., Shi, J., Abnet, C. C., Nelson, H., Knight, R., Chia, N., Ahsan, H. & Sinhaa, R., May 1 2017, In : Applied and Environmental Microbiology. 83, 10, e00361-17.

Research output: Contribution to journalArticle

17 Scopus citations

Comparison of whole-genome sequencing methods for analysis of three methicillin-resistant Staphylococcus aureus outbreaks

Cunningham, S. A., Chia, N., Jeraldo, P. R., Quest, D. J., Johnson, J. A., Boxrud, D. J., Taylor, A. J., Chen, J., Jenkins, G. D., Drucker, T. M., Nelson, H. & Patel, R., Jun 2017, In : Journal of clinical microbiology. 55, 6, p. 1946-1953 8 p.

Research output: Contribution to journalArticle

24 Scopus citations

Molecular epidemiology of Staphylococcus aureus bacteremia in a single large Minnesota medical center in 2015 as assessed using MLST, core genome MLST and spa typing

Park, K. H., Greenwood-Quaintance, K. E., Uhl, J. R., Cunningham, S. A., Chia, N., Jeraldo, P. R., Sampathkumar, P., Nelson, H. & Patel, R., Jun 2017, In : PloS one. 12, 6, e0179003.

Research output: Contribution to journalArticle

21 Scopus citations

Outcomes of Primary Colorectal Sarcoma: A National Cancer Data Base (NCDB) Review

Thiels, C. A., Bergquist, J. R., Krajewski, A. C., Lee, H. E., Nelson, H., Mathis, K. L., Habermann, E. B. & Cima, R. R., Mar 1 2017, In : Journal of Gastrointestinal Surgery. 21, 3, p. 560-568 9 p.

Research output: Contribution to journalArticle

7 Scopus citations

Results of a pooled analysis of IOERT containing multimodality treatment for locally recurrent rectal cancer: Results of 565 patients of two major treatment centres

Holman, F. A., Bosman, S. J., Haddock, M., Gunderson, L. L., Kusters, M., Nieuwenhuijzen, G. A. P., van den Berg, H., Nelson, H. & Rutten, H. J., Jan 1 2017, In : European Journal of Surgical Oncology. 43, 1, p. 107-117 11 p.

Research output: Contribution to journalArticle

22 Scopus citations

Safety and feasibility of minimally invasive inguinal lymph node dissection in patients with melanoma (SAFE-MILND): Report of a prospective multi-institutional trial

Jakub, J. W., Terando, A. M., Sarnaik, A., Ariyan, C. E., Faries, M. B., Zani, S., Neuman, H. B., Wasif, N., Farma, J. M., Averbook, B. J., Bilimoria, K. Y., Grotz, T. E., Allred, J. B. J., Suman, V. J., Brady, M. S., Tyler, D., Wayne, J. D. & Nelson, H., 2017, In : Annals of surgery. 265, 1, p. 192-196 5 p.

Research output: Contribution to journalArticle

17 Scopus citations

Shifts in the fecal microbiota associated with adenomatous polyps

Hale, V. L., Chen, J., Johnson, S., Harrington, S. C., Yab, T. C., Smyrk, T. C., Nelson, H., Boardman, L. A., Druliner, B. R., Levin, T. R., Rex, D. K., Ahnen, D. J., Lance, P., Ahlquist, D. A. & Chia, N., Jan 2017, In : Cancer Epidemiology Biomarkers and Prevention. 26, 1, p. 85-94 10 p.

Research output: Contribution to journalArticle

50 Scopus citations
2016
10 Scopus citations

An expansion of rare lineage intestinal microbes characterizes rheumatoid arthritis

Chen, J., Wright, K., Davis, J. M., Jeraldo, P., Marietta, E. V., Murray, J., Nelson, H., Matteson, E. L. & Taneja, V., Apr 21 2016, In : Genome medicine. 8, 1, 43.

Research output: Contribution to journalArticle

184 Scopus citations

Capturing one of the human gut microbiome's most wanted: Reconstructing the genome of a novel butyrate-producing, clostridial scavenger from metagenomic sequence data

Jeraldo, P., Hernandez, A., Nielsen, H. B., Chen, X., White, B. A., Goldenfeld, N., Nelson, H., Alhquist, D., Boardman, L. & Chia, N., 2016, In : Frontiers in Microbiology. 7, MAY, 783.

Research output: Contribution to journalArticle

18 Scopus citations

Comparison of collection methods for fecal samples for discovery metabolomics in epidemiologic studies

Loftfield, E., Vogtmann, E., Sampson, J. N., Moore, S. C., Nelson, H., Knight, R., Chia, N. & Sinha, R., Nov 1 2016, In : Cancer Epidemiology Biomarkers and Prevention. 25, 11, p. 1483-1490 8 p.

Research output: Contribution to journalArticle

33 Scopus citations

Impact of demographics on human gut microbial diversity in a US Midwest population

Chen, J., Ryu, E., Hathcock, M., Ballman, K., Chia, N., Olson, J. E. & Nelson, H., 2016, In : PeerJ. 2016, 1, e1514.

Research output: Contribution to journalArticle

32 Scopus citations

Multiple sclerosis patients have a distinct gut microbiota compared to healthy controls

Chen, J., Chia, N., Kalari, K. R., Yao, J. Z., Novotna, M., Soldan, M. M. P., Luckey, D. H., Marietta, E. V., Jeraldo, P. R., Chen, X., Weinshenker, B. G., Rodriguez, M., Kantarci, O. H., Nelson, H., Murray, J. A. & Mangalam, A. K., Jun 27 2016, In : Scientific reports. 6, 28484.

Research output: Contribution to journalArticle

286 Scopus citations

Potential contribution of the uterine microbiome in the development of endometrial cancer

Walther-António, M. R. S., Chen, J., Multinu, F., Hokenstad, A., Distad, T. J., Cheek, E. H., Keeney, G. L., Creedon, D. J., Nelson, H., Mariani, A. & Chia, N., Nov 25 2016, In : Genome medicine. 8, 1, 122.

Research output: Contribution to journalArticle

65 Scopus citations

Results of intraoperative electron beam radiotherapy containing multimodality treatment for locally unresectable T4 rectal cancer: A pooled analysis of the Mayo Clinic Rochester and Catharina Hospital Eindhoven

Holman, F. A., Haddock, M. G., Gunderson, L. L., Kusters, M., Nieuwenhuijzen, G. A. P., van den Berg, H. A., Nelson, H. & Rutten, H. J. T., 2016, In : Journal of Gastrointestinal Oncology. 7, 6, p. 903-916 14 p.

Research output: Contribution to journalArticle

9 Scopus citations

Surgery: Limitations of prospective surgical oncology trials-A US view

Balch, C. M., Nelson, H. & Niederhuber, J. E., Jan 1 2016, In : Nature Reviews Clinical Oncology. 13, 1, p. 6-8 3 p.

Research output: Contribution to journalArticle

2 Scopus citations
2015

A prospective analysis of urinary tract infections among elderly trauma patients

Zielinski, M. D., Kuntz, M. M., Polites, S. F., Boggust, A., Nelson, H., Khasawneh, M. A., Jenkins, D. H., Harmsen, S., Ballman, K. V. & Pieper, R., 2015, In : Journal of Trauma and Acute Care Surgery. 79, 4, p. 638-642 5 p.

Research output: Contribution to journalArticle

8 Scopus citations

Effect of laparoscopic-assisted resection vs open resection of stage II or III rectal cancer on pathologic outcomes the ACOSOG Z6051 randomized clinical trial

Fleshman, J., Branda, M., Sargent, D. J., Boller, A. M., George, V., Abbas, M., Peters, W. R., Maun, D., Chang, G., Herline, A., Fichera, A., Mutch, M., Wexner, S., Whiteford, M., Marks, J., Birnbaum, E., Margolin, D., Larson, D., Marcello, P., Posner, M. & 5 others, Read, T., Monson, J., Wren, S. M., Pisters, P. W. T. & Nelson, H., Oct 6 2015, In : JAMA - Journal of the American Medical Association. 314, 13, p. 1346-1355 10 p.

Research output: Contribution to journalArticle

481 Scopus citations

New manual for cancer surgery issued: Operative Standards for Cancer Surgery

Martin, L. W., Veeramachaneni, N. K., Katz, M. H. G., You, Y. N., Boughey, J. C., Nelson, H. & Hunt, K. K., Jun 1 2015, In : Bulletin of the American College of Surgeons. 100, 6, p. 43-44 2 p.

Research output: Contribution to journalArticle

Similar neutrophil-driven inflammatory and antibacterial responses in elderly patients with symptomatic and asymptomatic bacteriuria

Yu, Y., Zielinski, M. D., Rolfe, M. A., Kuntz, M. M., Nelson, H., Nelson, K. E. & Pieper, R., 2015, In : Infection and Immunity. 83, 10, p. 4142-4153 12 p.

Research output: Contribution to journalArticle

10 Scopus citations

Young age and aggressive treatment in colon cancer

Berian, J. R., Benson, A. B. & Nelson, H., Aug 11 2015, In : JAMA - Journal of the American Medical Association. 314, 6, p. 613-614 2 p.

Research output: Contribution to journalArticle

Young age and aggressive treatment in colon cancer

Berian, J. R., Benson, A. B. & Nelson, H., Aug 11 2015, In : JAMA - Journal of the American Medical Association. 314, 6, p. 613-614 2 p.

Research output: Contribution to journalArticle

8 Scopus citations
2014

An interactive individualized intervention to promote behavioral change to increase personal well-being in US surgeons

Shanafelt, T. D., Kaups, K. L., Nelson, H., Satele, D. V., Sloan, J. A., Oreskovich, M. R. & Dyrbye, L. N., Jan 2014, In : Annals of surgery. 259, 1, p. 82-88 7 p.

Research output: Contribution to journalArticle

48 Scopus citations

Calibration of quality-adjusted life years for oncology clinical trials

Sloan, J. A., Sargent, D. J., Novotny, P. J., Decker, P. A., Marks, R. S. & Nelson, H., Jun 2014, In : Journal of pain and symptom management. 47, 6, p. 1091-1099.e3

Research output: Contribution to journalArticle

4 Scopus citations

IM-TORNADO: A tool for comparison of 16S reads from paired-end libraries

Jeraldo, P., Kalari, K., Chen, X., Bhavsar, J., Mangalam, A., White, B., Nelson, H., Kocher, J. P. & Chia, N., Dec 15 2014, In : PloS one. 9, 12, e114804.

Research output: Contribution to journalArticle

56 Scopus citations