Guoqian D Jiang, MD, PhD

  • 587 Citations
  • 13 Scopus h-Index
20022019
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Research Output 2002 2019

  • 587 Citations
  • 13 Scopus h-Index
  • 58 Article
  • 36 Conference contribution
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Article
2019

ADEpedia-on-OHDSI: A next generation pharmacovigilance signal detection platform using the OHDSI common data model

Yu, Y., Ruddy, K. J., Hong, N., Tsuji, S., Wen, A., Shah, N. D. & Jiang, G. D., Mar 1 2019, In : Journal of Biomedical Informatics. 91, 103119.

Research output: Contribution to journalArticle

Pharmacovigilance
Informatics
Signal detection
Data structures
Health
1 Citation (Scopus)

Developing a portable natural language processing based phenotyping system

Sharma, H., Mao, C., Zhang, Y., Vatani, H., Yao, L., Zhong, Y., Rasmussen, L., Jiang, G. D., Pathak, J. & Luo, Y., Apr 4 2019, In : BMC Medical Informatics and Decision Making. 19, 78.

Research output: Contribution to journalArticle

Open Access
Natural Language Processing
Information Systems
Patient Discharge Summaries
Obesity
Unified Medical Language System
2018
1 Citation (Scopus)

A case study evaluating the portability of an executable computable phenotype algorithm across multiple institutions and electronic health record environments

Pacheco, J. A., Rasmussen, L. V., Kiefer, R. C., Campion, T. R., Speltz, P., Carroll, R. J., Stallings, S. C., Mo, H., Ahuja, M., Jiang, G. D., LaRose, E. R., Peissig, P. L., Shang, N., Benoit, B., Gainer, V. S., Borthwick, K., Jackson, K. L., Sharma, A., Wu, A. Y., Kho, A. N. & 4 others, Roden, D. M., Pathak, J., Denny, J. C. & Thompson, W. K., Nov 1 2018, In : Journal of the American Medical Informatics Association : JAMIA. 25, 11, p. 1540-1546 7 p.

Research output: Contribution to journalArticle

Electronic Health Records
Phenotype
Genomics
Prostatic Hyperplasia

Automated Population of an i2b2 Clinical Data Warehouse using FHIR

Solbrig, H. R., Hong, N., Murphy, S. N. & Jiang, G. D., Jan 1 2018, In : AMIA ... Annual Symposium proceedings. AMIA Symposium. 2018, p. 979-988 10 p.

Research output: Contribution to journalArticle

Delivery of Health Care
Population
Cost Savings
Health Personnel
Primary Health Care

Clinical Concept Value Sets and Interoperability in Health Data Analytics

Gold, S., Batch, A., McClure, R., Jiang, G. D., Kharrazi, H., Saripalle, R., Huser, V., Weng, C., Roderer, N., Szarfman, A., Elmqvist, N. & Gotz, D., Jan 1 2018, In : AMIA ... Annual Symposium proceedings. AMIA Symposium. 2018, p. 480-489 10 p.

Research output: Contribution to journalArticle

Health
Vocabulary
Ecosystem
Phenotype
Costs and Cost Analysis

Construction of mammographic examination process ontology using bottom–up hierarchical task analysis

Yagahara, A., Yokooka, Y., Jiang, G. D., Tsuji, S., Fukuda, A., Nishimoto, N., Kurowarabi, K. & Ogasawara, K., Jan 10 2018, (Accepted/In press) In : Radiological Physics and Technology. p. 1-9 9 p.

Research output: Contribution to journalArticle

Mammography
examination
evaluation
Intuition
positioning

Preliminary exploration of survival analysis using the OHDSI common data model: A case study of intrahepatic cholangiocarcinoma

Hong, N., Zhang, N., Wu, H., Lu, S., Yu, Y., Hou, L., Lu, Y., Liu, H. D. & Jiang, G. D., Dec 7 2018, In : BMC Medical Informatics and Decision Making. 18, 116.

Research output: Contribution to journalArticle

Informatics
Cholangiocarcinoma
Survival Analysis
Health
Vocabulary
Natural Language Processing
Delivery of Health Care
Research
3 Citations (Scopus)

Toward a normalized clinical drug knowledge base in China - Applying the RxNorm model to Chinese clinical drugs

Wang, L., Zhang, Y., Jiang, M., Wang, J., Dong, J., Liu, Y., Tao, C., Jiang, G. D., Zhou, Y. & Xu, H., Jul 1 2018, In : Journal of the American Medical Informatics Association. 25, 7, p. 809-818 10 p.

Research output: Contribution to journalArticle

RxNorm
Knowledge Bases
China
Pharmaceutical Preparations
2017

Blending FHIR RDF and OWL

Solbrig, H. R., Prud’hommeaux, E. & Jiang, G. D., Jan 1 2017, In : CEUR Workshop Proceedings. 2042

Research output: Contribution to journalArticle

Interoperability
Ontology
Medical problems
XML
Specifications

Building a semantic web-based metadata repository for facilitating detailed clinical modeling in cancer genome studies

Sharma, D. K., Solbrig, H. R., Tao, C., Weng, C., Chute, C. G. & Jiang, G. D., Jun 5 2017, In : Journal of Biomedical Semantics. 8, 1, 19.

Research output: Contribution to journalArticle

Semantic Web
Metadata
Semantics
Genes
Genome
1 Citation (Scopus)

Developing A Semantic Web-based Framework for Executing the Clinical Quality Language Using FHIR

Jiang, G. D., Prud’Hommeaux, E., Xiao, G. & Solbrig, H. R., Jan 1 2017, In : CEUR Workshop Proceedings. 2042

Research output: Contribution to journalArticle

Semantic Web
Data structures
Interchanges
Interoperability
XML

Mining Hierarchies and Similarity Clusters from Value Set Repositories

Peterson, K. J., Jiang, G. D., Brue, S. M., Shen, F. & Liu, H. D., Jan 1 2017, In : AMIA ... Annual Symposium proceedings. AMIA Symposium. 2017, p. 1372-1381 10 p.

Research output: Contribution to journalArticle

Cataloging
Knowledge Management
Semantics
Artifacts
Cluster Analysis
7 Citations (Scopus)

Modeling and validating HL7 FHIR profiles using semantic web Shape Expressions (ShEx)

Solbrig, H. R., Prud'hommeaux, E., Grieve, G., McKenzie, L., Mandel, J. C., Sharma, D. K. & Jiang, G. D., Mar 1 2017, In : Journal of Biomedical Informatics. 67, p. 90-100 11 p.

Research output: Contribution to journalArticle

Semantic Web
Semantics
Interoperability
Delivery of Health Care
Data description
21 Citations (Scopus)

Preoperative red cell distribution width and neutrophil-to-lymphocyte ratio predict survival in patients with epithelial ovarian cancer

Li, Z., Hong, N., Robertson, M., Wang, C. & Jiang, G. D., Feb 22 2017, In : Scientific Reports. 7, 43001.

Research output: Contribution to journalArticle

Erythrocyte Indices
Neutrophils
Lymphocytes
Survival
Blood Cell Count
2016
4 Citations (Scopus)

A computational framework for converting textual clinical diagnostic criteria into the quality data model

Hong, N., Li, D., Yu, Y., Xiu, Q., Liu, H. D. & Jiang, G. D., Oct 1 2016, In : Journal of Biomedical Informatics. 63, p. 11-21 11 p.

Research output: Contribution to journalArticle

Data structures
Natural Language Processing
Medical Informatics
Processing
XML
8 Citations (Scopus)

Automated learning of domain taxonomies from text using background knowledge

Hoxha, J., Jiang, G. D. & Weng, C., Oct 1 2016, In : Journal of Biomedical Informatics. 63, p. 295-306 12 p.

Research output: Contribution to journalArticle

Taxonomies
Learning
Syntactics
Semantics
Concept Formation
3 Citations (Scopus)

Developing a data element repository to support EHR-driven phenotype algorithm authoring and execution

Jiang, G. D., Kiefer, R. C., Rasmussen, L. V., Solbrig, H. R., Mo, H., Pacheco, J. A., Xu, J., Montague, E., Thompson, W. K., Denny, J. C., Chute, C. G. & Pathak, J., Aug 1 2016, In : Journal of Biomedical Informatics. 62, p. 232-242 11 p.

Research output: Contribution to journalArticle

Electronic Health Records
Data structures
Health
Phenotype
Metadata

Developing a modular architecture for creation of rule-based clinical diagnostic criteria

Hong, N., Pathak, J., Chute, C. G. & Jiang, G. D., Oct 21 2016, In : BioData Mining. 9, 1, 33.

Research output: Contribution to journalArticle

Ontology
Diagnostics
Semantics
Data structures
International Classification of Diseases

HL7 FHIR and Schema.org

Solbrig, H. R., Prud'hommeaux, E. & Jiang, G. D., 2016, In : CEUR Workshop Proceedings. 1795

Research output: Contribution to journalArticle

Interoperability
Websites
HTML
Interchanges
Search engines

Leveraging Terminology Services for Extract-Transform-Load Processes: A User-Centered Approach

Peterson, K. J., Jiang, G. D., Brue, S. M. & Liu, H. D., 2016, In : AMIA ... Annual Symposium proceedings. AMIA Symposium. 2016, p. 1010-1019 10 p.

Research output: Contribution to journalArticle

Terminology
Learning
Health
Research
8 Citations (Scopus)

Ontology-based collection, representation and analysis of drug-associated neuropathy adverse events

Guo, A., Racz, R., Hur, J., Lin, Y., Xiang, Z., Zhao, L., Rinder, J., Jiang, G. D., Zhu, Q. & He, Y., May 21 2016, In : Journal of Biomedical Semantics. 7, 1, 29.

Research output: Contribution to journalArticle

Ontology
Drug-Related Side Effects and Adverse Reactions
Pharmaceutical Preparations
Knowledge Bases
Chemotherapy

Standardized Representation of Clinical Study Data Dictionaries with CIMI Archetypes

Sharma, D. K., Solbrig, H. R., Prud'hommeaux, E., Pathak, J. & Jiang, G. D., 2016, In : AMIA ... Annual Symposium proceedings. AMIA Symposium. 2016, p. 1119-1128 10 p.

Research output: Contribution to journalArticle

Language
Clinical Studies
Semantics
Research Personnel
Metadata
9 Citations (Scopus)

The development of non-coding RNA ontology

Huang, J., Eilbeck, K., Smith, B., Blake, J. A., Dou, D., Huang, W., Natale, D. A., Ruttenberg, A., Huan, J., Zimmermann, M. T., Jiang, G. D., Lin, Y., Wu, B., Strachan, H. J., De Silva, N., Kasukurthi, M. V., Jha, V. K., He, Y., Zhang, S., Wang, X. & 3 others, Liu, Z., Borchert, G. M. & Tan, M., 2016, In : International Journal of Data Mining and Bioinformatics. 15, 3, p. 214-232 19 p.

Research output: Contribution to journalArticle

Untranslated RNA
RNA
ontology
Ontology
Semantics
8 Citations (Scopus)

The Non-Coding RNA Ontology (NCRO): A comprehensive resource for the unification of non-coding RNA biology

Huang, J., Eilbeck, K., Smith, B., Blake, J. A., Dou, D., Huang, W., Natale, D. A., Ruttenberg, A., Huan, J., Zimmermann, M. T., Jiang, G. D., Lin, Y., Wu, B., Strachan, H. J., He, Y., Zhang, S., Wang, X., Liu, Z., Borchert, G. M. & Tan, M., May 4 2016, In : Journal of Biomedical Semantics. 7, 1, 24.

Research output: Contribution to journalArticle

Untranslated RNA
RNA
Ontology
Biological Ontologies
Controlled Vocabulary
2 Citations (Scopus)

Using semantic web technologies for the generation of domain-specific templates to support clinical study metadata standards

Jiang, G. D., Evans, J., Endle, C. M., Solbrig, H. R. & Chute, C. G., 2016, In : Journal of Animal Science and Biotechnology. 7, 1, 10.

Research output: Contribution to journalArticle

world wide web
Semantic Web
Metadata
Semantics
clinical trials
2015
36 Citations (Scopus)

Desiderata for computable representations of electronic health records-driven phenotype algorithms

Other collaborators & Pathak, J., 2015, In : Journal of the American Medical Informatics Association. 22, 6, p. 1220-1230 11 p.

Research output: Contribution to journalArticle

Electronic Health Records
Phenotype
Natural Language Processing
Translational Medical Research
Terminology
11 Citations (Scopus)

Harmonization of detailed clinical models with clinical study data standards

Jiang, G. D., Evans, J., Oniki, T. A., Coyle, J. F., Bain, L., Huff, S. M., Kush, R. D. & Chute, C. G., 2015, In : Methods of Information in Medicine. 54, 1, p. 65-74 10 p.

Research output: Contribution to journalArticle

Electronic Health Records
Health
Research
Information Dissemination
Semantics
8 Citations (Scopus)

Mining severe drug-drug interaction adverse events using Semantic Web technologies: A case study

Jiang, G. D., Liu, H. D., Solbrig, H. R. & Chute, C. G., Mar 25 2015, (Accepted/In press) In : BioData Mining. p. 1-12 12 p.

Research output: Contribution to journalArticle

Drug interactions
Semantic Web
Drug-Related Side Effects and Adverse Reactions
Drug Interactions
Semantics
1 Citation (Scopus)

Quality Assurance of Cancer Study Common Data Elements Using A Post-Coordination Approach

Jiang, G. D., Solbrig, H. R., Prud'hommeaux, E., Tao, C., Weng, C. & Chute, C. G., Jan 1 2015, In : AMIA ... Annual Symposium proceedings. AMIA Symposium. 2015, p. 659-668 10 p.

Research output: Contribution to journalArticle

Neoplasms
Atlases
Genome
Common Data Elements
Information Storage and Retrieval
13 Citations (Scopus)

Review and evaluation of electronic health records-driven phenotype algorithm authoring tools for clinical and translational research

Xu, J., Rasmussen, L. V., Shaw, P. L., Jiang, G. D., Kiefer, R. C., Mo, H., Pacheco, J. A., Speltz, P., Zhu, Q., Denny, J. C., Pathak, J., Thompson, W. K. & Montague, E., 2015, In : Journal of the American Medical Informatics Association. 22, 6, p. 1251-1260 10 p.

Research output: Contribution to journalArticle

Translational Medical Research
Electronic Health Records
Phenotype
Software
PubMed
2014
2 Citations (Scopus)
Aromatase Inhibitors
Drug-Related Side Effects and Adverse Reactions
Breast Neoplasms
Mutation
Neoplasms
24 Citations (Scopus)

Network-based analysis reveals distinct association patterns in a semantic MEDLINE-based drug-disease-gene network

Zhang, Y., Tao, C., Jiang, G. D., Nair, A. A., Su, J., Chute, C. G. & Liu, H. D., Aug 6 2014, In : Journal of Biomedical Semantics. 5, 1, 33.

Research output: Contribution to journalArticle

Gene Regulatory Networks
Semantics
MEDLINE
Genes
Pharmaceutical Preparations
15 Citations (Scopus)

Standardizing adverse drug event reporting data

Wang, L., Jiang, G. D., Li, D. & Liu, H. D., Aug 12 2014, In : Journal of Biomedical Semantics. 5, 1, 36.

Research output: Contribution to journalArticle

Terminology
Drug-Related Side Effects and Adverse Reactions
Research Design
RxNorm
Glossaries
2013
35 Citations (Scopus)

A semantic-web oriented representation of the clinical element model for secondary use of electronic health records data

Tao, C., Jiang, G. D., Oniki, T. A., Freimuth, R., Zhu, Q., Sharma, D., Pathak, J., Huff, S. M. & Chute, C. G., 2013, In : Journal of the American Medical Informatics Association. 20, 3, p. 554-562 9 p.

Research output: Contribution to journalArticle

Electronic Health Records
Semantics
Terminology
Language
4 Citations (Scopus)

Using Semantic Web technology to support icd-11 textual definitions authoring

Jiang, G. D., Solbrig, H. R. & Chute, C. G., Apr 21 2013, In : Journal of Biomedical Semantics. 4, 1, 11.

Research output: Contribution to journalArticle

Semantic Web
Semantics
Systematized Nomenclature of Medicine
Unified Medical Language System
Technology
2012
32 Citations (Scopus)

MicroRNA-mRNA interactions in a murine model of hyperoxia-induced bronchopulmonary dysplasia

Dong, J., Carey, W. A., Abel, S., Collura, C., Jiang, G. D., Tomaszek, S., Sutor, S., Roden, A., Asmann, Y., Prakash, Y. S. & Wigle, D. A., May 30 2012, In : BMC Genomics. 13, 1, 204.

Research output: Contribution to journalArticle

Bronchopulmonary Dysplasia
Hyperoxia
MicroRNAs
Lung
Messenger RNA
9 Citations (Scopus)

Profiling structured product labeling with NDF-RT and RxNorm

Zhu, Q., Jiang, G. D. & Chute, C. G., Dec 20 2012, In : Journal of Biomedical Semantics. 3, 1, 16.

Research output: Contribution to journalArticle

RxNorm
Product Labeling
Terminology
Labeling
Labels
9 Citations (Scopus)
Unified Medical Language System
Semantics
National Cancer Institute (U.S.)
Neoplasms
Controlled Vocabulary
2011
19 Citations (Scopus)
Knowledge Bases
Drug-Related Side Effects and Adverse Reactions
Semantics
Technology
Information Storage and Retrieval
11 Citations (Scopus)

c-Myc regulates self-renewal in bronchoalveolar stem cells

Dong, J., Sutor, S., Jiang, G. D., Cao, Y., Asmann, Y. & Wigle, D. A., 2011, In : PLoS One. 6, 8, e23707.

Research output: Contribution to journalArticle

Stem cells
stem cells
Stem Cells
MicroRNAs
Genes
5 Citations (Scopus)

Quality evaluation of cancer study Common Data Elements using the UMLS Semantic Network

Jiang, G. D., Solbrig, H. R. & Chute, C. G., Dec 2011, In : Journal of Biomedical Informatics. 44, SUPPL. 1

Research output: Contribution to journalArticle

Unified Medical Language System
Semantics
Quality assurance
Neoplasms
Terminology
2010
16 Citations (Scopus)
Semantics
Type 2 Diabetes Mellitus
Systematized Nomenclature of Medicine
Phenotype
Research
69 Citations (Scopus)

MicroRNA Networks in Mouse Lung Organogenesis

Dong, J., Jiang, G. D., Asmann, Y., Tomaszek, S., Jen, J., Kislinger, T. & Wigle, D. A., 2010, In : PLoS One. 5, 5, e10854.

Research output: Contribution to journalArticle

Organogenesis
organogenesis
MicroRNAs
microRNA
messenger RNA
2009
37 Citations (Scopus)

Auditing the Semantic Completeness of SNOMED CT Using Formal Concept Analysis

Jiang, G. D. & Chute, C. G., Jan 2009, In : Journal of the American Medical Informatics Association. 16, 1, p. 89-102 14 p.

Research output: Contribution to journalArticle

Systematized Nomenclature of Medicine
Semantics
Proxy
21 Citations (Scopus)

Formalizing ICD coding rules using Formal Concept Analysis

Jiang, G. D., Pathak, J. & Chute, C. G., Jun 2009, In : Journal of Biomedical Informatics. 42, 3, p. 504-517 14 p.

Research output: Contribution to journalArticle

Formal concept analysis
International Classification of Diseases
Semantic Web
Semantics
Language
2008
4 Citations (Scopus)

LexValueSets: an approach for context-driven value sets extraction.

Pathak, J., Jiang, G. D., Dwarkanath, S. O., Buntrock, J. D. & Chute, C. G., 2008, In : AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium. p. 556-560 5 p.

Research output: Contribution to journalArticle

Terminology
Systematized Nomenclature of Medicine
Semantics
Information Systems

Representing the ClaML-based ICD10 in LexGrid terminology model.

Jiang, G. D., Peterson, K. J., Johnson, T. M., Celik, C., Jakob, R. & Chute, C. G., 2008, In : AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium. p. 992 1 p.

Research output: Contribution to journalArticle

Terminology
Language
Controlled Vocabulary
International Classification of Diseases
2007
3 Citations (Scopus)

An ontological approach to support the description of nursing practice in Japan with the ICNP

Jiang, G. D., Sato, H., Endoh, A., Ogasawara, K. & Sakurai, T., Jan 2007, In : International Journal of Medical Informatics. 76, 1, p. 55-65 11 p.

Research output: Contribution to journalArticle

Japan
Nursing
Nursing Records
Standardized Nursing Terminology
Practice (Psychology)
1 Citation (Scopus)
Controlled Vocabulary
International Classification of Functioning, Disability and Health
Knowledge Bases
Terminology
Dissection