Research Output 1986 2019

2019
1 Citation (Scopus)

Application of metagenomic shotgun sequencing to detect vector-borne pathogens in clinical blood samples

Vijayvargiya, P., Jeraldo, P. R., Thoendel, M. J., Greenwood-Quaintance, K. E., Garrigos, Z. E., Rizwan Sohail, M., Chia, N., Pritt, B. S. & Patel, R., Jan 1 2019, In : PloS one. 14, 10, e0222915.

Research output: Contribution to journalArticle

Open Access
Metagenomics
Mansonella
Firearms
Pathogens
Blood
1 Citation (Scopus)

Are early screening biomarkers for endometrial cancer needed to reduce health disparities?

Walther-Antonio, M. & Mariani, A., Apr 1 2019, In : American journal of obstetrics and gynecology. 220, 4, p. 408-409 2 p.

Research output: Contribution to journalLetter

Endometrial Neoplasms
Biomarkers
Health
2 Citations (Scopus)

Autologous Gene and Cell Therapy Provides Safe and Long-Term Curative Therapy in A Large Pig Model of Hereditary Tyrosinemia Type 1

Hickey, R., Nicolas, C. T., Allen, K., Mao, S., Elgilani, F., Glorioso, J., Amiot, B., VanLith, C., Guthman, R., Du, Z., Chen, H., Harding, C. O., Kaiser, R. A., Nyberg, S. & Lillegard, J. B., Jan 1 2019, In : Cell Transplantation. 28, 1, p. 79-88 10 p.

Research output: Contribution to journalArticle

Tyrosinemias
Cell- and Tissue-Based Therapy
Genetic Therapy
Liver
Hydrolases

Bacterial Single Cell Whole Transcriptome Amplification in Microfluidic Platform Shows Putative Gene Expression Heterogeneity

Liu, Y., Jeraldo, P., Jang, J. S., Eckloff, B., Jen, J. & Walther-Antonio, M., Jan 1 2019, In : Analytical Chemistry.

Research output: Contribution to journalArticle

Microfluidics
Gene expression
Amplification
RNA
Gene expression regulation
3 Citations (Scopus)

Classic chronic pancreatitis is associated with prior acute pancreatitis in only 50% of patients in a large single-institution study

Hori, Y., Vege, S. S., Chari, S. T., Gleeson, F. C., Levy, M. J., Pearson, R. K., Petersen, B. T., Kendrick, M. L., Takahashi, N. M., Truty, M., Smoot, R. & Topazian, M., Jan 1 2019, In : Pancreatology.

Research output: Contribution to journalArticle

Chronic Pancreatitis
Pancreatitis
2 Citations (Scopus)

Clinicopathological features and outcomes of fibrolamellar hepatocellular carcinoma

Chakrabarti, S., Tella, S. H., Kommalapati, A., Huffman, B. M., Yadav, S., Riaz, I. B., Goyal, G., Mody, K., Borad, M. J., Cleary, S., Smoot, R. & Mahipal, A., Jan 1 2019, In : Journal of Gastrointestinal Oncology. 10, 3, p. 554-561 8 p.

Research output: Contribution to journalArticle

Survival
Recurrence
Fibrolamellar hepatocellular carcinoma
Cell Death
Phosphotransferases
1 Citation (Scopus)

Comparison of oral collection methods for studies of microbiota

Vogtmann, E., Chen, J., Kibriya, M. G., Amir, A., Shi, J., Chen, Y., Islam, T., Eunes, M., Ahmed, A., Naher, J., Rahman, A., Barmon, B., Knight, R., Chia, N. D., Ahsan, H., Abnet, C. C. & Sinha, R., Jan 1 2019, In : Cancer Epidemiology Biomarkers and Prevention. 28, 1, p. 137-143 7 p.

Research output: Contribution to journalArticle

Microbiota
Postal Service
Temperature
Bangladesh
Scope mouthwash

Early-onset gastric cancer is a distinct disease with worrisome trends and oncogenic features

Bergquist, J. R., Leiting, J. L., Habermann, E. B., Cleary, S. P., Kendrick, M. L., Smoot, R., Nagorney, D. M., Truty, M. & Grotz, T. E., Jan 1 2019, In : Surgery (United States).

Research output: Contribution to journalArticle

Stomach Neoplasms
Incidence
Atlases
Histology
Epidemiology
2 Citations (Scopus)

Evaluation of the cosmosid bioinformatics platform for prosthetic joint-associated sonicate fluid shotgun metagenomic data analysis

Yan, Q., Mi Wi, Y., Thoendel, M. J., Raval, Y. S., Greenwood-Quaintance, K. E., Abdel, M., Jeraldo, P. R., Chia, N. D. & Patel, R., Feb 1 2019, In : Journal of Clinical Microbiology. 57, 2, e01182.

Research output: Contribution to journalArticle

Metagenomics
Firearms
Computational Biology
Joints
Bacterial Drug Resistance

Extreme value analysis of gut microbial alterations in colorectal cancer

Song, S. D., Jeraldo, P., Chen, J. & Chia, N., Mar 13 2019, In : Physical Review E. 99, 3, 032413.

Research output: Contribution to journalArticle

Colorectal Cancer
Extreme Values
microorganisms
Signature
cancer
Colonic Neoplasms
Neoplasms
Gastrointestinal Microbiome
1 Citation (Scopus)

Gut microbiome meta-analysis reveals dysbiosis is independent of body mass index in predicting risk of obesity-associated CRC

Greathouse, K. L., White, J. R., Padgett, R. N., Perrotta, B. G., Jenkins, G. D., Chia, N. & Chen, J., Feb 1 2019, In : BMJ Open Gastroenterology. 6, 1, e000247.

Research output: Contribution to journalArticle

Open Access
Dysbiosis
Meta-Analysis
Colorectal Neoplasms
Body Mass Index
Obesity

Hepatotoxicity and Toxicology of In Vivo Lentiviral Vector Administration in Healthy and Liver-Injury Mouse Models

Kaiser, R. A., Nicolas, C. T., Allen, K. L., Chilton, J. A., Du, Z., Hickey, R. & Lillegard, J. B., Jun 1 2019, In : Human Gene Therapy Clinical Development. 30, 2, p. 57-66 10 p.

Research output: Contribution to journalArticle

Toxicology
Liver
Wounds and Injuries
Body Weight
Tyrosinemias
1 Citation (Scopus)

Lack of correlation of virulence gene profiles of Staphylococcus aureus bacteremia isolates with mortality

Park, K. H., Greenwood-Quaintance, K. E., Cunningham, S. A., Rajagopalan, G., Chia, N. D., Jeraldo, P. R., Mandrekar, J. & Patel, R., Aug 1 2019, In : Microbial Pathogenesis. 133, 103543.

Research output: Contribution to journalArticle

Bacteremia
Virulence
Staphylococcus aureus
Mortality
Superantigens
1 Citation (Scopus)

Late-life time-restricted feeding and exercise differentially alter healthspan in obesity

Schafer, M. J., Mazula, D. L., Brown, A. K., White, T. A., Atkinson, E., Pearsall, V. M., Aversa, Z., Verzosa, G. C., Smith, L. A., Matveyenko, A. V., Miller, J. D. & LeBrasseur, N. K., Aug 1 2019, In : Aging Cell. 18, 4, e12966.

Research output: Contribution to journalArticle

Open Access
Obesity
Activities of Daily Living
Body Composition
Pathology
Health Priorities
23 Citations (Scopus)

Length-independent telomere damage drives post-mitotic cardiomyocyte senescence

Anderson, R., Lagnado, A., Maggiorani, D., Walaszczyk, A., Dookun, E., Chapman, J., Birch, J., Salmonowicz, H., Ogrodnik, M., Jurk, D., Proctor, C., Correia-Melo, C., Victorelli, S., Fielder, E., Berlinguer-Palmini, R., Owens, A., Greaves, L. C., Kolsky, K. L., Parini, A., Douin-Echinard, V. & 14 others, LeBrasseur, N. K., Arthur, H. M., Tual-Chalot, S., Schafer, M. J., Roos, C. M., Miller, J. D., Robertson, N., Mann, J., Adams, P. D., Tchkonia, T., Kirkland, J. L., Mialet-Perez, J., Richardson, G. D. & Passos, J., Mar 1 2019, In : EMBO Journal. 38, 5, e100492.

Research output: Contribution to journalArticle

Open Access
Telomere
Cardiac Myocytes
Aging of materials
Telomere Shortening
Phenotype
Metabolites
Growth
Theoretical Models
Chemical analysis
Experiments
4 Citations (Scopus)

Neoadjuvant vs. adjuvant chemotherapy for cholangiocarcinoma: A propensity score matched analysis

Yadav, S., Xie, H., Bin-Riaz, I., Sharma, P., Durani, U., Goyal, G., Borah, B. J., Borad, M. J., Smoot, R., Roberts, L. R., Go, R. S., Mc Williams, R. R. & Mahipal, A., Jan 1 2019, In : European Journal of Surgical Oncology.

Research output: Contribution to journalArticle

Propensity Score
Cholangiocarcinoma
Adjuvant Chemotherapy
Drug Therapy
Survival
3 Citations (Scopus)

Network Tomography for Understanding Phenotypic Presentations in Aortic Stenosis

Casaclang-Verzosa, G., Shrestha, S., Khalil, M. J., Cho, J. S., Tokodi, M., Balla, S., Alkhouli, M., Badhwar, V., Narula, J., Miller, J. D. & Sengupta, P. P., Feb 1 2019, In : JACC: Cardiovascular Imaging. 12, 2, p. 236-248 13 p.

Research output: Contribution to journalArticle

Aortic Valve Stenosis
Tomography
Aortic Valve
Balloon Valvuloplasty
Left Ventricular Function

Patient-Derived Xenografts Can Be Reliably Generated from Patient Clinical Biopsy Specimens

Hernandez, M. C., Bergquist, J. R., Leiting, J. L., Ivanics, T., Yang, L., Smoot, R., Nagorney, D. M. & Truty, M., Jan 1 2019, In : Journal of Gastrointestinal Surgery.

Research output: Contribution to journalArticle

Heterografts
Biopsy
Neoplasms
Cholangiocarcinoma
Gallbladder

Postmenopause as a key factor in the composition of the Endometrial Cancer Microbiome (ECbiome)

Walsh, D. M., Hokenstad, A. N., Chen, J., Sung, J., Jenkins, G. D., Chia, N., Nelson, H., Mariani, A. & Walther-Antonio, M. R. S., Dec 1 2019, In : Scientific reports. 9, 1, 19213.

Research output: Contribution to journalArticle

Open Access
Postmenopause
Microbiota
Endometrial Neoplasms
Menopause
Ulcer

Prediction and Inference With Missing Data in Patient Alert Systems

Storlie, C., Therneau, T. M., Carter, R. E., Chia, N. D., Bergquist, J. R., Huddleston, J. M. & Romero-Brufau, S., Jan 1 2019, In : Journal of the American Statistical Association.

Research output: Contribution to journalArticle

Missing Data
Predictors
Prediction
Imputation
Uncertainty

Re: Geobiology reveals how human kidney stones dissolve in vivo

Sivaguru, M., Saw, J. J., Williams, J. C., Lieske, J. C., Krambeck, A. E., Romero, M. F., Chia, N., Schwaderer, A. L., Alcalde, R. E., Bruce, W. J., Wildman, D. E., Fried, G. A., Werth, C. J., Reeder, R. J., Yau, P. M., Sanford, R. A. & Fouke, B. W., Apr 1 2019, In : Journal of Urology. 201, 4, p. 663-664 2 p.

Research output: Contribution to journalComment/debate

Kidney Calculi

Reproducibility, stability, and accuracy of microbial profiles by fecal sample collection method in three distinct populations

Byrd, D. A., Chen, J., Vogtmann, E., Hullings, A., Song, S. J., Amir, A., Kibriya, M. G., Ahsan, H., Chen, Y., Nelson, H., Knight, R., Shi, J., Chia, N. & Sinha, R., Jan 1 2019, In : PloS one. 14, 11, e0224757.

Research output: Contribution to journalArticle

Open Access
reproducibility
Ethanol
Blood
Population
sampling
3 Citations (Scopus)

Safety, Diagnostic Accuracy, and Effects of Endoscopic Ultrasound Fine-Needle Aspiration on Detection of Extravascular Migratory Metastases

Rustagi, T., Gleeson, F. C., Chari, S. T., Lehrke, H. D., Takahashi, N., Malikowski, T. M., Abu Dayyeh, B. K., Chandrasekhara, V., Iyer, P. G., Kendrick, M. L., Pearson, R. K., Petersen, B. T., Rajan, E., Smoot, R. L., Storm, A. C., Topazian, M. D., Truty, M. J., Vege, S. S., Wang, K. K. & Levy, M. J., Nov 2019, In : Clinical Gastroenterology and Hepatology. 17, 12, p. 2533-2540.e1

Research output: Contribution to journalArticle

Fine Needle Biopsy
Neoplasm Metastasis
Safety
Tomography
Magnetic Resonance Imaging
3 Citations (Scopus)

Smooth muscle brain-derived neurotrophic factor contributes to airway hyperreactivity in a mouse model of allergic asthma

Britt, R. J., Thompson, M. A., Wicher, S. A., Manlove, L. J., Roesler, A., Fang, Y. H., Roos, C., Smith, L., Miller, J. D., Pabelick, C. M. & Prakash, Y. S., Feb 1 2019, In : FASEB journal : official publication of the Federation of American Societies for Experimental Biology. 33, 2, p. 3024-3034 11 p.

Research output: Contribution to journalArticle

Brain-Derived Neurotrophic Factor
Smooth Muscle
Muscle
Asthma
Allergens

Survival benefit of neoadjuvant therapy in patients with non-metastatic pancreatic ductal adenocarcinoma: A propensity matching and intention-to-treat analysis

Sugimoto, M., Takahashi, N. M., Farnell, M. B., Smyrk, T. C., Truty, M., Nagorney, D. M., Smoot, R., Chari, S. T., Carter, R. E. & Kendrick, M. L., Jan 1 2019, (Accepted/In press) In : Journal of Surgical Oncology.

Research output: Contribution to journalArticle

Intention to Treat Analysis
Neoadjuvant Therapy
Adenocarcinoma
Survival
Surgical Pathology
19 Citations (Scopus)

Targeting senescent cells alleviates obesity-induced metabolic dysfunction

Palmer, A. K., Xu, M., Zhu, Y., Pirtskhalava, T., Weivoda, M., Hachfeld, C. M., Prata, L. G., van Dijk, T. H., Verkade, E., Casaclang-Verzosa, G., Johnson, K. O., Cubro, H., Doornebal, E. J., Ogrodnik, M., Jurk, D., Jensen, M. D., Chini, E. N., Miller, J. D., Matveyenko, A. V., Stout, M. B. & 13 others, Schafer, M. J., White, T. A., Hickson, L., Demaria, M., Garovic, V. D., Grande, J. P., Arriaga, E. A., Kuipers, F., von Zglinicki, T., LeBrasseur, N. K., Campisi, J., Tchkonia, T. & Kirkland, J. L., Jun 1 2019, In : Aging Cell. 18, 3, e12950.

Research output: Contribution to journalArticle

Open Access
Obesity
Adipose Tissue
Obese Mice
Insulin Resistance
p16 Genes
3 Citations (Scopus)
Open Access
Microfluidics
genome
Amplification
platforms
Genes
2 Citations (Scopus)

YAP and the Hippo pathway in cholangiocarcinoma

Sugihara, T., Isomoto, H., Gores, G. J. & Smoot, R., Jun 5 2019, In : Journal of Gastroenterology. 54, 6, p. 485-491 7 p.

Research output: Contribution to journalReview article

Open Access
Cholangiocarcinoma
Organ Size
Cell Surface Receptors
Animal Models
Research Personnel
2018
72 Citations (Scopus)

A Comprehensive Pan-Cancer Molecular Study of Gynecologic and Breast Cancers

The Cancer Genome Atlas Research Network, Apr 9 2018, In : Cancer Cell. 33, 4, p. 690-705.e9

Research output: Contribution to journalArticle

Breast Neoplasms
Atlases
Long Noncoding RNA
Decision Trees
Genome
1 Citation (Scopus)

A Curative-Intent Trimodality Approach for Isolated Abdominal Nodal Metastases in Metastatic Colorectal Cancer: Update of a Single-Institutional Experience

Johnson, B., Jin, Z., Haddock, M., Hallemeier, C., Martenson, J. A., Smoot, R., Larson, D., Dozois, E., Nagorney, D. M. & Grothey, A. F., Jun 1 2018, In : Oncologist. 23, 6, p. 679-685 7 p.

Research output: Contribution to journalArticle

Colorectal Neoplasms
Neoplasm Metastasis
Radiotherapy
Survival
Confidence Intervals
8 Citations (Scopus)

Adjuvant systemic therapy after resection of node positive gallbladder cancer: Time for a well-designed trial? (Results of a US-national retrospective cohort study)

Bergquist, J. R., Shah, H. N., Habermann, E. B., Hernandez, M. C., Ivanics, T., Kendrick, M. L., Smoot, R. L., Nagorney, D. M., Borad, M. J., Mc Williams, R. R. & Truty, M., Apr 1 2018, In : International Journal of Surgery. 52, p. 171-179 9 p.

Research output: Contribution to journalArticle

Gallbladder Neoplasms
Cohort Studies
Retrospective Studies
Adjuvant Chemotherapy
Gallbladder
164 Citations (Scopus)

An Integrated TCGA Pan-Cancer Clinical Data Resource to Drive High-Quality Survival Outcome Analytics

The Cancer Genome Atlas Research Network, Apr 5 2018, In : Cell. 173, 2, p. 400-416.e11

Research output: Contribution to journalArticle

Atlases
Genes
Genome
Survival
Neoplasms
38 Citations (Scopus)

A Pan-Cancer Analysis of Enhancer Expression in Nearly 9000 Patient Samples

The Cancer Genome Atlas Research Network, Apr 5 2018, In : Cell. 173, 2, p. 386-399.e12

Research output: Contribution to journalArticle

Genes
Tumors
Neoplasms
Computational methods
Chromatin
33 Citations (Scopus)

A Potent and Specific CD38 Inhibitor Ameliorates Age-Related Metabolic Dysfunction by Reversing Tissue NAD+ Decline

Tarragó, M. G., Chini, C. C. S., Kanamori, K. S., Warner, G. M., Caride, A., de Oliveira, G. C., Rud, M., Samani, A., Hein, K. Z., Huang, R., Jurk, D., Cho, D. S., Boslett, J. J., Miller, J. D., Zweier, J. L., Passos, J., Doles, J., Becherer, D. J. & Chini, E. N., Jan 1 2018, (Accepted/In press) In : Cell Metabolism.

Research output: Contribution to journalArticle

NAD
NAD+ Nucleosidase
Telomere
DNA Damage
Sirtuins

A Rare Case of Recurrent Small Bowel Obstructions

Kamboj, A. K., Stroh, G. R., Smoot, R. & Prichard, D. O., Nov 1 2018, In : Gastroenterology. 155, 5, p. e5-e7

Research output: Contribution to journalComment/debate

A Tale of Three Tails and a Cystic Lesion: A Rare Cause of Recurrent Acute Pancreatitis

Nagpal, S. J. S., Levy, M. J., Takahashi, N., Kendrick, M. L., Smyrk, T. C., Pearson, R. K. & Majumder, S., Jul 2 2018, (Accepted/In press) In : American Journal of Gastroenterology. p. 1-2 2 p.

Research output: Contribution to journalArticle

Pancreatitis
2 Citations (Scopus)

Ca2+ Entry Through Reverse Mode Na+/Ca2+ Exchanger Contributes to Store Operated Channel-Mediated Neointima Formation After Arterial Injury

Liu, B., Zhang, B., Huang, S., Yang, L., Roos, C. M., Thompson, M. A., Prakash, Y. S., Zang, J., Miller, J. D. & Guo, R., Jan 1 2018, (Accepted/In press) In : Canadian Journal of Cardiology.

Research output: Contribution to journalArticle

Neointima
Vascular Smooth Muscle
Smooth Muscle Myocytes
Cell Proliferation
Wounds and Injuries
7 Citations (Scopus)

Case for a role of the microbiome in gynecologic cancers: Clinician's perspective

Mert, I., Walther-Antonio, M. & Mariani, A., Sep 1 2018, In : Journal of Obstetrics and Gynaecology Research. 44, 9, p. 1693-1704 12 p.

Research output: Contribution to journalReview article

Microbiota
Neoplasms
Human Body
Homeostasis
Female Genital Diseases
198 Citations (Scopus)

Cell-of-Origin Patterns Dominate the Molecular Classification of 10,000 Tumors from 33 Types of Cancer

The Cancer Genome Atlas Network, Apr 5 2018, In : Cell. 173, 2, p. 291-304.e6

Research output: Contribution to journalArticle

Tumors
Tissue
Histology
Methylation
Oncology
13 Citations (Scopus)

Clostridioides difficile uses amino acids associated with gut microbial dysbiosis in a subset of patients with diarrhea

Battaglioli, E. J., Hale, V. L., Chen, J., Jeraldo, P., Ruiz-Mojica, C., Schmidt, B. A., Rekdal, V. M., Till, L. M., Huq, L., Smits, S. A., Moor, W. J., Jones-Hall, Y., Smyrk, T. C., Khanna, S., Pardi, D. S., Grover, M., Patel, R., Chia, N. D., Nelson, H., Sonnenburg, J. L. & 2 others, Farrugia, G. & Kashyap, P. C., Oct 24 2018, In : Science Translational Medicine. 10, 464, eaam7019.

Research output: Contribution to journalArticle

Dysbiosis
Diarrhea
Amino Acids
Infection
Proline
2 Citations (Scopus)

Comparative evaluation of cDNA library construction approaches for RNA-Seq analysis from low RNA-content human specimens

Masters, T. L., Hilker, C. A., Jeraldo, P. R., Bhagwate, A. V., Greenwood-Quaintance, K. E., Eckloff, B. W., Chia, N. D., Hanssen, A. D., Abdel, M., Yao, J. Z., Jen, J. & Patel, R., Nov 1 2018, In : Journal of Microbiological Methods. 154, p. 55-62 8 p.

Research output: Contribution to journalArticle

Gene Library
RNA
RNA Sequence Analysis
Synovial Fluid
Transcriptome
55 Citations (Scopus)

Comparative Molecular Analysis of Gastrointestinal Adenocarcinomas

The Cancer Genome Atlas Research Network, Apr 9 2018, In : Cancer Cell. 33, 4, p. 721-735.e8

Research output: Contribution to journalArticle

Adenocarcinoma
Neoplasms
Genome
Chromosomal Instability
Rectum
213 Citations (Scopus)

Comprehensive Characterization of Cancer Driver Genes and Mutations

The MC3 Working Group & The Cancer Genome Atlas Research Network, Apr 5 2018, In : Cell. 173, 2, p. 371-385.e18

Research output: Contribution to journalArticle

Neoplasm Genes
Tumors
Genes
Mutation
Neoplasms
5 Citations (Scopus)

Curative Ex Vivo Hepatocyte-Directed Gene Editing in a Mouse Model of Hereditary Tyrosinemia Type 1

Vanlith, C., Guthman, R., Nicolas, C. T., Allen, K., Du, Z., Joo, D. J., Nyberg, S., Lillegard, J. B. & Hickey, R., Nov 1 2018, In : Human Gene Therapy. 29, 11, p. 1315-1326 12 p.

Research output: Contribution to journalArticle

Tyrosinemias
Dependovirus
Hepatocytes
Hepatectomy
Clustered Regularly Interspaced Short Palindromic Repeats
5 Citations (Scopus)

Decreased Skeletal Muscle Volume Is a Predictive Factor for Poorer Survival in Patients Undergoing Surgical Resection for Pancreatic Ductal Adenocarcinoma

Sugimoto, M., Farnell, M. B., Nagorney, D. M., Kendrick, M. L., Truty, M., Smoot, R. L., Chari, S. T., Moynagh, M. R., Petersen, G. M., Carter, R. E. & Takahashi, N., Feb 1 2018, (Accepted/In press) In : Journal of Gastrointestinal Surgery. p. 1-9 9 p.

Research output: Contribution to journalArticle

Skeletal Muscle
Adenocarcinoma
Survival
Body Composition
Recurrence
17 Citations (Scopus)

Direct detection and identification of prosthetic joint infection pathogens in synovial fluid by metagenomic shotgun sequencing

Ivy, M. I., Thoendel, M. J., Jeraldo, P. R., Greenwood-Quaintance, K. E., Hanssen, A. D., Abdel, M., Chia, N. D., Yao, J. Z., Tande, A. J., Mandrekar, J. & Patel, R., Sep 1 2018, In : Journal of Clinical Microbiology. 56, 9, e00402.

Research output: Contribution to journalArticle

Metagenomics
Synovial Fluid
Firearms
Joints
Infection
22 Citations (Scopus)

Distinct microbes, metabolites, and ecologies define the microbiome in deficient and proficient mismatch repair colorectal cancers

Hale, V. L., Jeraldo, P., Chen, J., Mundy, M., Yao, J., Priya, S., Keeney, G., Lyke, K., Ridlon, J., White, B. A., French, A. J., Thibodeau, S. N., Diener, C., Resendis-Antonio, O., Gransee, J., Dutta, T., Petterson, X. M., Sung, J., Blekhman, R., Boardman, L. A. & 3 others, Larson, D., Nelson, H. & Chia, N. D., Oct 31 2018, In : Genome Medicine. 10, 1, 1 p.

Research output: Contribution to journalArticle

DNA Mismatch Repair
Microbiota
Ecology
Colorectal Neoplasms
Microbial Interactions
61 Citations (Scopus)

Driver Fusions and Their Implications in the Development and Treatment of Human Cancers

The Fusion Analysis Working Group & The Cancer Genome Atlas Research Network, Apr 3 2018, In : Cell Reports. 23, 1, p. 227-238.e3

Research output: Contribution to journalArticle

Human Development
Phosphotransferases
Genes
Gene expression
Tumors