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Research Output 1961 2020

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Article
2019
1 Citation (Scopus)
Open Access
Alpharetrovirus
Glycoproteins
Viruses
Pressure
Virus Internalization

A VP35 Mutant Ebola Virus Lacks Virulence but Can Elicit Protective Immunity to Wild-Type Virus Challenge

Woolsey, C., Menicucci, A. R., Cross, R. W., Luthra, P., Agans, K. N., Borisevich, V., Geisbert, J. B., Mire, C. E., Fenton, K. A., Jankeel, A., Anand, S., Ebihara, H., Geisbert, T. W., Messaoudi, I. & Basler, C. F., Sep 17 2019, In : Cell reports. 28, 12, p. 3032-3046.e6

Research output: Contribution to journalArticle

Open Access
Ebolavirus
Viruses
Virulence
Immunity
Interferon Type I
1 Citation (Scopus)

Awake craniotomies for epileptic gliomas: intraoperative and postoperative seizure control and prognostic factors

Wang, Y. C., Lee, C. C., Takami, H., Shen, S., Chen, K. T., Wei, K. C., Wu, M. H., Worrell, G. A. & Chen, P. Y., Jan 1 2019, In : Journal of neuro-oncology.

Research output: Contribution to journalArticle

Craniotomy
Glioma
Seizures
Isocitrate Dehydrogenase
Epilepsy

Axon Registry® data validation: Accuracy assessment of data extraction and measure specification

Baca, C. M., Benish, S., Videnovic, A., Lundgren, K., Magliocco, B., Schierman, B., Palmer, L. & Jones, L., Apr 30 2019, In : Neurology. 92, 18, p. 847-858 12 p.

Research output: Contribution to journalArticle

Axons
Registries
Electronic Health Records
Data Accuracy
Validation Studies

B7-1 drives TGF-β stimulated pancreatic carcinoma cell migration and expression of EMT target genes

Kang, J. H., Jung, M. Y. & Leof, E. B., Jan 1 2019, In : PloS one. 14, 9, e0222083.

Research output: Contribution to journalArticle

Open Access
Epithelial-Mesenchymal Transition
transforming growth factor beta
cell movement
Transforming Growth Factor beta
carcinoma

Bacterial Single Cell Whole Transcriptome Amplification in Microfluidic Platform Shows Putative Gene Expression Heterogeneity

Liu, Y., Jeraldo, P., Jang, J. S., Eckloff, B., Jen, J. & Walther-Antonio, M., Jan 1 2019, In : Analytical Chemistry.

Research output: Contribution to journalArticle

Microfluidics
Gene expression
Amplification
RNA
Gene expression regulation
3 Citations (Scopus)

Bad news and good news in AD, and how to reconcile them

Knopman, D. S., Jan 1 2019, (Accepted/In press) In : Nature Reviews Neurology.

Research output: Contribution to journalArticle

Amyloid
Alzheimer Disease
Clinical Trials

BARI 2D: A Reanalysis Focusing on Cardiovascular Events

BARI 2D Study Group, Nov 2019, In : Mayo Clinic proceedings. 94, 11, p. 2249-2262 14 p.

Research output: Contribution to journalArticle

Insulin
Cardiovascular Diseases
Therapeutics
Coronary Artery Bypass
Angioplasty
2 Citations (Scopus)

Barrett esophagus length, nodularity, and low-grade dysplasia are predictive of progression to esophageal adenocarcinoma

Solanky, D., Krishnamoorthi, R., Crews, N., Johnson, M., Wang, K. K. N., Wolfsen, H., Fleischer, D., Ramirez, F. C., Katzka, D. A., Buttar, N. S. & Iyer, P. G., May 1 2019, In : Journal of clinical gastroenterology. 53, 5, p. 361-365 5 p.

Research output: Contribution to journalArticle

Barrett Esophagus
Adenocarcinoma
Confidence Intervals
Biopsy
Proportional Hazards Models

Barriers and facilitators to clinical information seeking: a systematic review

Aakre, C. A., Maggio, L. A., Fiol, G. D. & Cook, D. A., Oct 1 2019, In : Journal of the American Medical Informatics Association : JAMIA. 26, 10, p. 1129-1140 12 p.

Research output: Contribution to journalArticle

Information Seeking Behavior
Point-of-Care Systems
Computer Literacy
Medicine
Cultural Anthropology

Baseline and Evolutionary Radiologic Features in Sporadic, Hemorrhagic Brain Cavernous Malformations

Flemming, K., Kumar, S., Lanzino, G. & Brinjikji, W., Jun 1 2019, In : AJNR. American journal of neuroradiology. 40, 6, p. 967-972 6 p.

Research output: Contribution to journalArticle

Open Access
Edema
Brain
Hemorrhage
Research Ethics Committees
Natural History
1 Citation (Scopus)

B-cell peripheral neurolymphomatosis: MRI and 18F-FDG PET/CT imaging characteristics

DeVries, A. H., Howe, B. M., Spinner, R. J. & Broski, S., Jan 1 2019, (Accepted/In press) In : Skeletal Radiology.

Research output: Contribution to journalArticle

Marek Disease
Fluorodeoxyglucose F18
B-Lymphocytes
Biopsy
Denervation
1 Citation (Scopus)

BCL6 inhibitor-mediated downregulation of phosphorylated SAMHD1 and T cell activation are associated with decreased HIV infection and reactivation

Cai, Y., Abdel-Mohsen, M., Tomescu, C., Xue, F., Wu, G., Howell, B. J., Ai, Y., Sun, J., Azzoni, L., Le Coz, C., Romberg, N. & Montaner, L. J., Jan 1 2019, In : Journal of Virology. 93, 2, e01073-18.

Research output: Contribution to journalArticle

HIV infections
HIV Infections
Down-Regulation
T-lymphocytes
T-Lymphocytes
1 Citation (Scopus)

BCL6 modulates tissue neutrophil survival and exacerbates pulmonary inflammation following influenza virus infection

Zhu, B., Zhang, R., Li, C., Jiang, L., Xiang, M., Ye, Z., Kita, H., Melnick, A. M., Dent, A. L. & Sun, J., Jun 11 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 24, p. 11888-11893 6 p.

Research output: Contribution to journalArticle

Tissue Survival
Virus Diseases
Orthomyxoviridae
Pneumonia
Neutrophils
1 Citation (Scopus)
Heart Valves
Tissue engineering
Tissue Engineering
Cells
Tissue
10 Citations (Scopus)

Best Practices Recommendations for Diagnostic Immunohistochemistry in Lung Cancer

Yatabe, Y., Dacic, S., Borczuk, A. C., Warth, A., Russell, P. A., Lantuejoul, S., Beasley, M. B., Thunnissen, E., Pelosi, G., Rekhtman, N., Bubendorf, L., Mino-Kenudson, M., Yoshida, A., Geisinger, K. R., Noguchi, M., Chirieac, L. R., Bolting, J., Chung, J. H., Chou, T. Y., Chen, G. & 12 others, Poleri, C., Lopez-Rios, F., Papotti, M., Sholl, L. M., Roden, A., Travis, W. D., Hirsch, F. R., Kerr, K. M., Tsao, M. S., Nicholson, A. G., Wistuba, I. & Moreira, A. L., Mar 1 2019, In : Journal of Thoracic Oncology. 14, 3, p. 377-407 31 p.

Research output: Contribution to journalArticle

Open Access
Practice Guidelines
Lung Neoplasms
Immunohistochemistry
Pathology
Carcinoma

Bilateral Brachial Plexus Injury After MiraDry Procedure for Axillary Hyperhidrosis

Puffer, R. C., Bishop, A. T., Spinner, R. J. & Shin, A. Y-S., Apr 1 2019, In : World neurosurgery. 124, p. 370-372 3 p.

Research output: Contribution to journalArticle

Arm Injuries
Hyperhidrosis
Brachial Plexus
Microwaves
Axilla
2 Citations (Scopus)
Arthroscopy
Thigh
Hip
Tears
Pathology

Bile and fat excretion are biomarkers of clinically significant diarrhoea and constipation in irritable bowel syndrome

Vijayvargiya, P., Camilleri, M., Burton, D., Busciglio, I., Lueke, A. & Donato, L. J., Mar 1 2019, In : Alimentary Pharmacology and Therapeutics. 49, 6, p. 744-758 15 p.

Research output: Contribution to journalArticle

Irritable Bowel Syndrome
Constipation
Bile
Diarrhea
Biomarkers

Bile duct involvement by hepatocellular carcinoma: A rare occurrence and poor prognostic indicator in bile duct brushing samples

Bhattarai, S., Graham, R. P., Sigel, C. S., Shi, J., Gonzalez, R. S., Xue, Y., Krasinskas, A. M., HooKim, K., Adsay, V. & Reid, M. D., Jan 1 2019, (Accepted/In press) In : Cancer Cytopathology.

Research output: Contribution to journalArticle

Bile Ducts
Hepatocellular Carcinoma
Carcinoma
Biliary Tract
Liver

Biliary Amyloidoma as a Cause for Pancreatitis

Qin, Y., Smyrk, T. C. & Topazian, M., Jan 1 2019, In : Clinical Gastroenterology and Hepatology.

Research output: Contribution to journalArticle

Pancreatitis
15 Citations (Scopus)

Binimetinib, encorafenib, and cetuximab triplet therapy for patients with BRAF V600E–mutant metastatic colorectal cancer: Safety lead-in results from the phase III BEACON Colorectal Cancer Study

Van Cutsem, E., Huijberts, S., Grothey, A. F., Yaeger, R., Cuyle, P. J., Elez, E., Fakih, M., Montagut, C., Peeters, M., Yoshino, T., Wasan, H., Desai, J., Ciardiello, F., Gollerkeri, A., Christy-Bittel, J., Maharry, K., Sandor, V., Schellens, J. H. M., Kopetz, S. & Tabernero, J., Jan 1 2019, In : Journal of Clinical Oncology. 37, 17, p. 1460-1469 10 p.

Research output: Contribution to journalArticle

Open Access
Colorectal Neoplasms
Safety
Disease-Free Survival
Therapeutics
Survival

Bioinformatics and DNA-extraction strategies to reliably detect genetic variants from FFPE breast tissue samples

Bhagwate, A. V., Liu, Y., Winham, S. J., McDonough, S. J., Stallings-Mann, M. L., Heinzen, E. P., Davila, J. I., Vierkant, R. A., Hoskin, T. L., Frost, M., Carter, J., Radisky, D. C., Cunningham, J. M., Degnim, A. C. & Wang, C., Sep 2 2019, In : BMC genomics. 20, 1, 689.

Research output: Contribution to journalArticle

Open Access
Computational Biology
Paraffin
Formaldehyde
Breast
DNA

Biological analysis of flexor tendon repair-failure stump tissue: A potential recycling of tissue for tendon regeneration

Lu, C. C., Zhang, T., Reisdorf, R. L., Amadio, P. C., An, K. N., Moran, S. L., Gingery, A. & Zhao, C. D., Jan 1 2019, In : Bone and Joint Research. 8, 6, p. 232-245 14 p.

Research output: Contribution to journalArticle

Open Access
Tendons
Regeneration
Stem Cells
Collagen
Mesenchymal Stromal Cells

Biological Cardiac Tissue Effects of High-Energy Heavy Ions – Investigation for Myocardial Ablation

Rapp, F., Simoniello, P., Wiedemann, J., Bahrami, K., Grünebaum, V., Ktitareva, S., Durante, M., Lugenbiel, P., Thomas, D., Lehmann, H. I., Packer, D. L., Graeff, C. & Fournier, C., Dec 1 2019, In : Scientific reports. 9, 1, 5000.

Research output: Contribution to journalArticle

Open Access
Heavy Ions
Cardiac Myocytes
Swine
X-Rays
Radiation Pneumonitis

Biologic Dose and Imaging Changes in Pediatric Brain Tumor Patients Receiving Spot Scanning Proton Therapy

Roberts, K. W., Wan Chan Tseung, H. S., Eckel, L. J., Harmsen, W. S., Beltran, C. & Laack, N. N., Jan 1 2019, (Accepted/In press) In : International Journal of Radiation Oncology Biology Physics.

Research output: Contribution to journalArticle

Proton Therapy
Brain Neoplasms
brain
therapy
tumors

Biologics and 30-Day Postoperative Complications After Abdominal Operations for Crohn's Disease: Are There Differences in the Safety Profiles?

Lightner, A. L., McKenna, N. P., Alsughayer, A., Harmsen, W. S., Taparra, K., Parker, M. E., Raffals, L. E. & Loftus, E. V., Nov 1 2019, In : Diseases of the colon and rectum. 62, 11, p. 1352-1362 11 p.

Research output: Contribution to journalArticle

Biological Products
Crohn Disease
Biological Therapy
Safety
Necrosis
3 Citations (Scopus)

Biology and prognostic impact of clonal plasmacytoid dendritic cells in chronic myelomonocytic leukemia

Lucas, N., Duchmann, M., Rameau, P., Noël, F., Michea, P., Saada, V., Kosmider, O., Pierron, G., Fernandez-Zapico, M. E., Howard, M. T., King, R., Niyongere, S., Diop, M. K., Fenaux, P., Itzykson, R., Willekens, C., Ribrag, V., Fontenay, M., Padron, E., Soumelis, V. & 3 others, Droin, N., Patnaik, M. M. & Solary, E., Jan 1 2019, In : Leukemia.

Research output: Contribution to journalArticle

Leukemia, Myelomonocytic, Chronic
Dendritic Cells
Bone Marrow
Protein-Tyrosine Kinases
Flow Cytometry
4 Citations (Scopus)

Biomarker analysis beyond angiogenesis: RAS/RAF mutation status, tumour sidedness, and second-line ramucirumab efficacy in patients with metastatic colorectal carcinoma from RAISE-a global phase III study

Yoshino, T., Portnoy, D. C., Obermannová, R., Bodoky, G., Prausová, J., Garcia-Carbonero, R., Ciuleanu, T., García-Alfonso, P., Cohn, A. L., Van Cutsem, E., Yamazaki, K., Lonardi, S., Muro, K., Kim, T. W., Yamaguchi, K., Grothey, A. F., O'Connor, J., Taieb, J., Wijayawardana, S. R., Hozak, R. R. & 2 others, Nasroulah, F. & Tabernero, J., Jan 1 2019, In : Annals of oncology : official journal of the European Society for Medical Oncology. 30, 1, p. 124-131 8 p.

Research output: Contribution to journalArticle

Colorectal Neoplasms
Biomarkers
Mutation
Neoplasms
Survival
2 Citations (Scopus)

Biospecimens and Molecular and Cellular Biomarkers in Aneurysmal Subarachnoid Hemorrhage Studies: Common Data Elements and Standard Reporting Recommendations

the Unruptured Intracranial Aneurysms and SAH CDE Project Investigators, Jun 16 2019, In : Neurocritical care. 30, p. 46-59 14 p.

Research output: Contribution to journalArticle

Subarachnoid Hemorrhage
Biomarkers
Meta-Analysis
Guidelines
Practice Guidelines

Bipolar Cartilage Lesions of the Knee: A Systematic Review of Techniques, Outcomes, and Complications

Melugin, H. P., Bernard, C. D., Camp, C. L., Saris, D. B. F. & Krych, A., Jan 1 2019, In : Cartilage.

Research output: Contribution to journalArticle

Cartilage
Knee
Autografts
Chondrocytes
Survival Rate

Bipolar depression and suicidal ideation: Moderators and mediators of a complex relationship

Kamali, M., Reilly-Harrington, N. A., Chang, W. C., McInnis, M., McElroy, S. L., Ketter, T. A., Shelton, R. C., Deckersbach, T., Tohen, M., Kocsis, J. H., Calabrese, J. R., Gao, K., Thase, M. E., Bowden, C. L., Kinrys, G., Bobo, W. V., Brody, B. D., Sylvia, L. G., Rabideau, D. J. & Nierenberg, A. A., Dec 1 2019, In : Journal of Affective Disorders. 259, p. 164-172 9 p.

Research output: Contribution to journalArticle

Mediator Complex
Suicidal Ideation
Bipolar Disorder
Depression
Suicide

Bis(propyl)-cognitin potentiates rehabilitation of treadmill exercise after a transient focal cerebral ischemia, possibly via inhibiting NMDA receptor and regulating VEGF expression

Ke, Z., Hu, S., Cui, W., Sun, J., Zhang, S., Mak, S., Wang, J., Tang, J., Pang, Y-P., Han, Y. & Tong, K., Sep 1 2019, In : Neurochemistry International. 128, p. 143-153 11 p.

Research output: Contribution to journalArticle

Exercise Therapy
Transient Ischemic Attack
N-Methyl-D-Aspartate Receptors
Vascular Endothelial Growth Factor A
Pharmaceutical Preparations

Blenderized Tube Feedings for Adult Patients on Home Enteral Nutrition: A Pilot Study

Hurt, R. T., Epp, L. M., Duellman, W. M., Pattinson, A. K., Lammert, L., Baker, M. R., Miller, L. D., Kuchkuntla, A. R. & Mundi, M. S., Apr 1 2019, In : Journal of Alternative and Complementary Medicine. 25, 4, p. 413-416 4 p.

Research output: Contribution to journalArticle

Enteral Nutrition
Weights and Measures
Weight Gain
Outcome Assessment (Health Care)

Bleomycin use in the treatment of Hodgkin lymphoma (HL): toxicity and outcomes in the modern era

Taparra, K., Liu, H., Polley, M. Y., Ristow, K., Habermann, T. M. & Ansell, S. M., Jan 1 2019, (Accepted/In press) In : Leukemia and Lymphoma.

Research output: Contribution to journalArticle

Bleomycin
Hodgkin Disease
Lung
Therapeutics
indium-bleomycin

Blinatumomab for Acute Lymphoblastic Leukemia Relapse after Allogeneic Hematopoietic Stem Cell Transplantation

Stein, A. S., Kantarjian, H., Gökbuget, N., Bargou, R., Litzow, M. R., Rambaldi, A., Ribera, J. M., Zhang, A., Zimmerman, Z., Zugmaier, G. & Topp, M. S., Jan 1 2019, In : Biology of Blood and Marrow Transplantation.

Research output: Contribution to journalArticle

Open Access
Hematopoietic Stem Cell Transplantation
Precursor Cell Lymphoblastic Leukemia-Lymphoma
Recurrence
Residual Neoplasm
blinatumomab

Blood transfusion history and risk of non-Hodgkin lymphoma: an InterLymph pooled analysis

Cerhan, J. R., Kane, E., Vajdic, C. M., Linet, M. S., Monnereau, A., Bernstein, L., de Sanjose, S., Chiu, B. C. H., Spinelli, J. J., Maso, L. D., Zhang, Y., Larrabee, B. R., Cozen, W., Smith, A. G., Clavel, J., Serraino, D., Zheng, T., Holly, E. A., Weisenberger, D. D., Slager, S. L. & 1 others, Bracci, P. M., Jan 1 2019, In : Cancer Causes and Control.

Research output: Contribution to journalArticle

Blood Transfusion
Non-Hodgkin's Lymphoma
History
Odds Ratio
Confidence Intervals
1 Citation (Scopus)

Body composition changes after left gastric artery embolization in overweight and obese individuals

Takahashi, E. A., Takahashi, N. M., Reisenauer, C. J., Moynagh, M. R. & Misra, S., Jan 1 2019, In : Abdominal Radiology.

Research output: Contribution to journalArticle

Body Composition
Stomach
Arteries
Adipose Tissue
Skeletal Muscle

Body mass index: Implications on disease severity and postoperative complications in patients with Crohn's disease undergoing abdominal surgery

McKenna, N. P., Habermann, E. B., Zielinski, M. D., Lightner, A. & Mathis, K. L., Jan 1 2019, In : Surgery (United States).

Research output: Contribution to journalArticle

Crohn Disease
Body Mass Index
Surgical Wound Infection
Thinness
Obesity
3 Citations (Scopus)

Body mass index, mammographic density, and breast cancer risk by estrogen receptor subtype

Shieh, Y., Scott, C. G., Jensen, M. R., Norman, A. D., Bertrand, K. A., Pankratz, V. S., Brandt, K. R., Visscher, D. W., Shepherd, J. A., Tamimi, R. M., Vachon, C. M. & Kerlikowske, K., Apr 3 2019, In : Breast Cancer Research. 21, 1, 48.

Research output: Contribution to journalArticle

Open Access
Estrogen Receptors
Body Mass Index
Breast Neoplasms
Mammography
San Francisco
4 Citations (Scopus)

Bone Grafting for Scaphoid Nonunions: Is Free Vascularized Bone Grafting Superior for Scaphoid Nonunion?

Aibinder, W. R., Wagner, E. R., Bishop, A. T. & Shin, A. Y-S., Mar 1 2019, In : Hand (New York, N.Y.). 14, 2, p. 217-222 6 p.

Research output: Contribution to journalArticle

Bone Transplantation
Bone and Bones
Transplants
Thigh
Articular Range of Motion
1 Citation (Scopus)

Bone marrow adipose tissue-derived stem cell factor mediates metabolic regulation of hematopoiesis

Zhang, Z., Huang, Z., Ong, B., Sahu, C., Zeng, H. & Ruan, H. B., Sep 1 2019, In : Haematologica. 104, 9, p. 1731-1743 13 p.

Research output: Contribution to journalArticle

Open Access
Stem Cell Factor
Hematopoiesis
Hematopoietic Stem Cells
Adipose Tissue
Bone Marrow

Bone vascularized composite allotransplantation model in swine tibial defect: Evaluation of surgical angiogenesis and transplant viability

Kotsougiani, D., Hundepool, C. A., Bulstra, L. F., Friedrich, P. F., Shin, A. Y-S. & Bishop, A. T., Feb 1 2019, In : Microsurgery. 39, 2, p. 160-166 7 p.

Research output: Contribution to journalArticle

Vascularized Composite Allotransplantation
Swine
Transplants
Bone and Bones
Tibia
2 Citations (Scopus)

Book-Shaped Acellular Fibrocartilage Scaffold with Cell-loading Capability and Chondrogenic Inducibility for Tissue-Engineered Fibrocartilage and Bone-Tendon Healing

Chen, C., Liu, F., Tang, Y., Qu, J., Cao, Y., Zheng, C., Chen, Y., Li, M., Zhao, C. D., Sun, L., Hu, J. & Lu, H., Jan 23 2019, In : ACS Applied Materials and Interfaces. 11, 3, p. 2891-2907 17 p.

Research output: Contribution to journalArticle

Tendons
Scaffolds
Bone
Tissue
Infiltration

­Book-shaped decellularized tendon matrix scaffold combined with bone marrow mesenchymal stem cells-sheets for repair of achilles tendon defect in rabbit

Xie, S., Zhou, Y., Tang, Y., Chen, C., Li, S., Zhao, C. D., Hu, J. & Lu, H., Jan 1 2019, In : Journal of Orthopaedic Research.

Research output: Contribution to journalArticle

Achilles Tendon
Mesenchymal Stromal Cells
Tendons
Bone Marrow
Rabbits
2 Citations (Scopus)

Borrowing of strength from indirect evidence in 40 network meta-analyses

Lin, L., Xing, A., Kofler, M. J. & Murad, M. H., Feb 1 2019, In : Journal of Clinical Epidemiology. 106, p. 41-49 9 p.

Research output: Contribution to journalArticle

Uncertainty
Research Personnel
Network Meta-Analysis
Datasets
Brachial Plexus
Recovery of Function
Rabbits
Wounds and Injuries
Arm Injuries

BRAF V600E-induced, tumor intrinsic PD-L1 can regulate chemotherapy-induced apoptosis in human colon cancer cells and in tumor xenografts

Feng, D., Qin, B., Pal, K., Sun, L., Dutta, S., Dong, H., Liu, X., Mukhopadhyay, D., Huang, S. & Sinicrope, F. A., Jan 1 2019, (Accepted/In press) In : Oncogene.

Research output: Contribution to journalArticle

Heterografts
Colonic Neoplasms
Apoptosis
Ligands
Drug Therapy
1 Citation (Scopus)
Tauopathies
DNA-Binding Proteins
Atrophy
Brain
Amygdala
2 Citations (Scopus)

Brain Distribution and Active Efflux of Three panRAF Inhibitors: Considerations in the Treatment of Melanoma Brain Metastases

Gampa, G., Kim, M., Mohammad, A. S., Parrish, K. E., Mladek, A. C., Sarkaria, J. N. & Elmquist, W. F., Mar 1 2019, In : The Journal of pharmacology and experimental therapeutics. 368, 3, p. 446-461 16 p.

Research output: Contribution to journalArticle

Melanoma
Neoplasm Metastasis
P-Glycoprotein
Brain
Mitogen-Activated Protein Kinase Kinases