Rochester, MN

Research Output

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Conference contribution
2016

Navigating PCB stackup layer assignments for optimized si and pi performance in high speed, high power designs

Smutzer, C. M., Degerstrom, M. J. & Gilbert, B. K., Jun 20 2016, 2016 IEEE 20th Workshop on Signal and Power Integrity, SPI 2016 - Proceedings. Institute of Electrical and Electronics Engineers Inc., 7496274

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

On developing resources for patient-level information retrieval

Wu, S., Timmons, T., Yates, A., Wang, M., Bedrick, S., Hersh, W. & Liu, H. D., Jan 1 2016, Proceedings of the 10th International Conference on Language Resources and Evaluation, LREC 2016. European Language Resources Association (ELRA), p. 3412-3416 5 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Overview of the immune system

Medina, K. L., 2016, Autoimmune Neurology, 2016. Elsevier, Vol. 133. p. 61-76 16 p. (Handbook of Clinical Neurology; vol. 133).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

6 Scopus citations

Paraneoplastic and idiopathic autoimmune neurologic disorders: Approach to diagnosis and treatment

Pittock, S. J. & Palace, J., Jan 1 2016, Autoimmune Neurology, 2016. Pittock, S. J. & Vincent, A. (eds.). Elsevier, p. 165-183 19 p. (Handbook of Clinical Neurology; vol. 133).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

9 Scopus citations

Performance measurements of a PET/CT system with prototype SiPM detectors

Kemp, B. J., Peterson, W. T., Uribe, J., Williams, J. J., Lowe, V. & Stearns, C. W., Oct 3 2016, 2015 IEEE Nuclear Science Symposium and Medical Imaging Conference, NSS/MIC 2015. Institute of Electrical and Electronics Engineers Inc., 7582091

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Phantom analysis for characterization and comparison of PET detector sampling and reconstruction settings

Wollenweber, S. D. & Kemp, B. J., Oct 3 2016, 2015 IEEE Nuclear Science Symposium and Medical Imaging Conference, NSS/MIC 2015. Institute of Electrical and Electronics Engineers Inc., 7582039

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Portable closed-loop optogenetic stimulation device

Edward, E. S., Kouzani, A. Z., Kale, R. P. & Tye, S. J., Oct 13 2016, 2016 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2016. Institute of Electrical and Electronics Engineers Inc., Vol. 2016-October. p. 5250-5253 4 p. 7591911

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

Predicting detection performance with model observers: Fourier domain or spatial domain?

Chen, B., Yu, L., Leng, S., Kofler, J., Favazza, C., Vrieze, T. & McCollough, C. H., 2016, Medical Imaging 2016: Physics of Medical Imaging. SPIE, Vol. 9783. 978326

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations

Prioritizing adverse drug reaction and drug repositioning candidates generated by literature-based discovery

Rastegar-Mojarad, M., Elayavilli, R. K., Wang, L., Prasad, R. & Liu, H. D., Oct 2 2016, ACM-BCB 2016 - 7th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics. Association for Computing Machinery, Inc, p. 289-296 8 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

5 Scopus citations

Quantitative characterization of brain β-amyloid in 718 normal subjects using a joint PiB/FDG PET image histogram

Camp, J. J., Hanson, D. P., Lowe, V., Kemp, B. J., Senjem, M. L., Murray, M. E., Dickson, D. W., Parisi, J. E., Petersen, R. C., Robb, R. A. & Holmes III, D. R., 2016, Medical Imaging 2016: Computer-Aided Diagnosis. SPIE, Vol. 9785. 97852V

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Rotor pivot point identification with intrinsic mode function complexity index using empirical mode decomposition

Arunachalam, S. P., Mulpuru, S., Friedman, P. A. & Tolkacheva, E. G., Jul 8 2016, 2016 IEEE EMBS International Student Conference: Expanding the Boundaries of Biomedical Engineering and Healthcare, ISC 2016 - Proceedings. Institute of Electrical and Electronics Engineers Inc., 7508597

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Staggered NLP-assisted refinement for clinical annotations of chronic disease events

Wu, S. T., Wi, C. I., Sohn, S., Liu, H. D. & Juhn, Y. J., Jan 1 2016, Proceedings of the 10th International Conference on Language Resources and Evaluation, LREC 2016. European Language Resources Association (ELRA), p. 426-429 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

The brain-machine interface: Nanotechniques for improving brain electrochemical monitoring and modulating

Andrews, R., Bennet, K., Chang, S-Y., Koehne, J., Lee, K. H., Marsh, M., Meyyappan, M. & Rand, E., 2016, Advanced Materials - TechConnect Briefs 2016. TechConnect, Vol. 1. p. 61-64 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Tissue characterization using simultaneous estimation of backscatter coefficient and elastic shear modulus

Rouyer, J., Torres, G., Urban, M. W. & Lavarello, R., Oct 13 2016, 2016 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2016. Institute of Electrical and Electronics Engineers Inc., Vol. 2016-October. p. 2881-2884 4 p. 7591331

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Towards real-time QRS feature extraction for wearable monitors

Smital, L., Haider, C. R., Leinveber, P., Jurak, P., Gilbert, B. K. & Holmes III, D. R., Oct 13 2016, 2016 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2016. Institute of Electrical and Electronics Engineers Inc., Vol. 2016-October. p. 3519-3522 4 p. 7591487

Research output: Chapter in Book/Report/Conference proceedingConference contribution

6 Scopus citations

Ultrasound surface wave elastography of the living human eye

Zhang, X., McLaren, J., Kazemi, A., Lin, S. C., Pruet, C. M. & Sit, A. J., Nov 1 2016, 2016 IEEE International Ultrasonics Symposium, IUS 2016. IEEE Computer Society, Vol. 2016-November. 7728510

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Using synthetic clinical data to train an HMM-based POS tagger

Knoll, B. C., Melton, G. B., Liu, H. D., Xu, H. & Pakhomov, S. V. S., Apr 18 2016, 3rd IEEE EMBS International Conference on Biomedical and Health Informatics, BHI 2016. Institute of Electrical and Electronics Engineers Inc., p. 252-255 4 p. 7455882

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations
2017

1 Tb/s anti-replay protection with 20-port on-chip RAM memory in FPGAs

Buhrow, B. R., Goetzinger, W. J. & Gilbert, B. K., Feb 15 2017, 2016 International Conference on Reconfigurable Computing and FPGAs, ReConFig 2016. Institute of Electrical and Electronics Engineers Inc., 7857190

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

A comprehensive (biological and computational) investigation on the role of microRNA::mRNA regulations performed in chronic obstructive pulmonary disease and lung cancer

Huang, J., Dou, D., She, J., Limper, A. H., Yang, Y. & Yang, P., Jan 17 2017, Proceedings - 2016 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2016. Burrage, K., Zhu, Q., Liu, Y., Tian, T., Wang, Y., Hu, X. T., Jiang, Q., Song, J., Morishita, S., Burrage, K. & Wang, G. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 1062-1067 6 p. 7822669. (Proceedings - 2016 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2016).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

A consensus-based approach for harmonizing the ohdsi common data model with HL7 FHIR

Jiang, G. D., Kiefer, R. C., Sharma, D. K., Prud'hommeaux, E. & Solbrig, H. R., Jan 1 2017, MEDINFO 2017: Precision Healthcare through Informatics - Proceedings of the 16th World Congress on Medical and Health Informatics. IOS Press, Vol. 245. p. 887-891 5 p. (Studies in Health Technology and Informatics; vol. 245).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

A coordinated scheduling policy to improve patient access to surgical services

Martinez, G., Huschka, T., Sir, M. & Pasupathy, K. S., Jan 17 2017, 2016 Winter Simulation Conference: Simulating Complex Service Systems, WSC 2016. Institute of Electrical and Electronics Engineers Inc., p. 2041-2052 12 p. 7822248

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Acoustoelasticity modeling of bladder tissue nonlinearity: Ex vivo study

Bayat, M., Singh, A., Webb, J., Kumar, V., Gregory, A., Alizad, A. & Fatemi, M., Oct 31 2017, 2017 IEEE International Ultrasonics Symposium, IUS 2017. IEEE Computer Society, 8091856

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Acoustoelasticity modeling of bladder tissue nonlinearity: Ex vivo study

Bayat, M., Singh, A., Webb, J., Kumar, V., Gregory, A., Alizad, A. & Fatemi, M., Oct 31 2017, 2017 IEEE International Ultrasonics Symposium, IUS 2017. IEEE Computer Society, 8092788

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Aligned-layer text search in clinical notes

Wu, S., Wen, A., Wang, Y., Liu, S. & Liu, H. D., Jan 1 2017, MEDINFO 2017: Precision Healthcare through Informatics - Proceedings of the 16th World Congress on Medical and Health Informatics. IOS Press, Vol. 245. p. 629-633 5 p. (Studies in Health Technology and Informatics; vol. 245).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

A model-free approach to probe motion artifacts suppression for in vivo imaging with probe oscillation shear wave elastography (PROSE)

Mellema, D., Song, P., Manduca, A., Urban, M. W., Kinnick, R., Greenleaf, J. F. & Chen, S. D., Oct 31 2017, 2017 IEEE International Ultrasonics Symposium, IUS 2017. IEEE Computer Society, 8092826

Research output: Chapter in Book/Report/Conference proceedingConference contribution

A model-free approach to probe motion artifacts suppression for in vivo imaging with probe oscillation shear wave elastography (PROSE)

Mellema, D. C., Song, P., Manduca, A., Urban, M. W., Kinnick, R. R., Greenleaf, J. F. & Chen, S. D., Oct 31 2017, 2017 IEEE International Ultrasonics Symposium, IUS 2017. IEEE Computer Society, 8092641

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Analysis of clinical variations in asthma care documented in electronic health records between staff and resident physicians

Sohn, S., Wi, C. I., Juhn, Y. J. & Liu, H. D., Jan 1 2017, MEDINFO 2017: Precision Healthcare through Informatics - Proceedings of the 16th World Congress on Medical and Health Informatics. IOS Press, Vol. 245. p. 1170-1174 5 p. (Studies in Health Technology and Informatics; vol. 245).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

Analysis of mylenated nerve fibers using an image acquisition system

Johnson, D. M., Wehde, M. B., Dyck, P. J., Engelsted, J. K. & Davies, J. L., Jul 19 2017, 2017 IEEE International Symposium on Medical Measurements and Applications, MeMeA 2017 - Proceedings. Institute of Electrical and Electronics Engineers Inc., p. 51-55 5 p. 7985848

Research output: Chapter in Book/Report/Conference proceedingConference contribution

A novel design to power the micro-ECG sensor implanted in adult zebrafish

Schossow, D., Ritchie, P., Cao, H., Chiao, J. C., Yang, J. & Xu, X. H., Oct 18 2017, 2017 IEEE Antennas and Propagation Society International Symposium, Proceedings. Institute of Electrical and Electronics Engineers Inc., Vol. 2017-January. p. 1681-1682 2 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Answering diabetic patients' questions using expert-vetted online resources: A case study

Zeng, Y., Liu, X., Wang, L., Liu, H. D. & Wang, Y., Jan 17 2017, Proceedings - 2016 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2016. Institute of Electrical and Electronics Engineers Inc., p. 525-528 4 p. 7822575

Research output: Chapter in Book/Report/Conference proceedingConference contribution

A preliminary comparison of three tourniquet instructions for just-in-time guidance of a simulated tourniquet application

Lowndes, B. R., Forsyth, K. L., Prytz, E., Johnson, C. O., Abdelrahman, A., Sztajnkrycer, M. D., Franz, W. B., Blocker, R. C. & Hallbeck, M. S., 2017, Proceedings of the Human Factors and Ergonomics Society 2017 International Annual Meeting, HFES 2017. Human Factors an Ergonomics Society Inc., p. 1076-1080 5 p. (Proceedings of the Human Factors and Ergonomics Society; vol. 2017-October).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Assessment of interstitial lung disease using lung ultrasound surface wave elastography

Zhang, X., Zhou, B., Osborn, T., Bartholmai, B. J., Greenleaf, J. F. & Kalra, S., Oct 31 2017, 2017 IEEE International Ultrasonics Symposium, IUS 2017. IEEE Computer Society, 8092738

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

Assessment of interstitial lung disease using lung ultrasound surface wave elastogrqphy

Zhang, X., Zhou, B., Osborn, T., Bartholmai, B. J., Greenleaf, J. F. & Kalra, S., Oct 31 2017, 2017 IEEE International Ultrasonics Symposium, IUS 2017. IEEE Computer Society, 8091736

Research output: Chapter in Book/Report/Conference proceedingConference contribution

A study of synthetic aperture focusing using plane waves to provide wider field of view ultrasound imaging without side-lobe artifacts due to the use of sampling angle in transmitting inclined plane waves

Kim, B. H., Alizad, A. & Fatemi, M., Oct 31 2017, 2017 IEEE International Ultrasonics Symposium, IUS 2017. IEEE Computer Society, 8092079

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Automated liver elasticity calculation for 3D MRE

Dzyubak, B., Glaser, K. J., Manduca, A. & Ehman, R. L., 2017, Medical Imaging 2017: Computer-Aided Diagnosis. SPIE, Vol. 10134. 101340Y

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

A virtual clinical trial using projection-based nodule insertion to determine radiologist reader performance in lung cancer screening CT

Yu, L., Hu, Q., Koo, C. W., Takahashi, E. A., Levin, D. L., Johnson, T., Hora, M. J., Dirks, S., Chen, B., McMillan, K., Leng, S., Fletcher, J. G. & McCollough, C. H., 2017, Medical Imaging 2017: Physics of Medical Imaging. SPIE, Vol. 10132. 101321R

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

Background-free visualization of microvasculature networks

Bayat, M., Fatemi, M. & Alizad, A., Oct 31 2017, 2017 IEEE International Ultrasonics Symposium, IUS 2017. IEEE Computer Society, 8092668

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

Building an i2b2-based integrated data repository for cancer research: A case study of ovarian cancer registry

Hong, N., Li, Z., Kiefer, R. C., Robertson, M. S., Goode, E. L., Wang, C. & Jiang, G. D., 2017, Data Management and Analytics for Medicine and Healthcare - 2nd International Workshop, DMAH 2016 Held at VLDB 2016, Revised Selected Papers. Springer Verlag, Vol. 10186 LNCS. p. 121-135 15 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10186 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Building interoperable FHIR-based vocabulary mapping services: A case study of OHDSI vocabularies and mappings

Jiang, G. D., Kiefer, R., Prud'hommeaux, E. & Solbrig, H. R., Jan 1 2017, MEDINFO 2017: Precision Healthcare through Informatics - Proceedings of the 16th World Congress on Medical and Health Informatics. IOS Press, Vol. 245. 1 p. (Studies in Health Technology and Informatics; vol. 245).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations

Cardiac atrial kick shear wave elastography with ultrafast diverging wave imaging: An in vivo pilot study

Engel, A. J., Hsu, H. H., Song, P. & Bashford, G. R., Oct 31 2017, 2017 IEEE International Ultrasonics Symposium, IUS 2017. IEEE Computer Society, 8092742

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Cardiac atrial kick shear wave elastography with ultrafast diverging wave imaging: An in vivo pilot study

Engel, A., Hsu, H., Song, P. & Bashford, G., Oct 31 2017, 2017 IEEE International Ultrasonics Symposium, IUS 2017. IEEE Computer Society, 8092904

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Classification of ulcerative colitis severity in colonoscopy videos using CNN

Alammari, A., Islam, A. B. M. R., Oh, J. H., Tavanapong, W., Wong, J. & De Groen, P. C., Oct 9 2017, 2017 9th International Conference on Information Management and Engineering, ICIME 2017. Association for Computing Machinery, p. 139-144 6 p. (ACM International Conference Proceeding Series).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

Comparison of shear velocity dispersion in viscoelastic phantoms measured by ultrasound-based shear wave elastography and magnetic resonance elastography

Urban, M. W., Chen, J. & Ehman, R. L., Oct 31 2017, 2017 IEEE International Ultrasonics Symposium, IUS 2017. IEEE Computer Society, 8091625

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Comparison of shear velocity dispersion in viscoelastic phantoms measured by ultrasound-based shear wave elastography and magnetic resonance elastography

Urban, M. W., Chen, J. & Ehman, R. L., Oct 31 2017, 2017 IEEE International Ultrasonics Symposium, IUS 2017. IEEE Computer Society, 8092418

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

Data-driven longitudinal modeling and prediction of symptom dynamics in major depressive disorder: Integrating factor graphs and learning methods

Athreya, A. P., Banerjee, S. S., Neavin, D., Kaddurah-Daouk, R., Rush, A. J., Frye, M. A., Wang, L. M., Weinshilboum, R. M., Bobo, W. V. & Iyer, R. K., Oct 4 2017, 2017 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2017. Institute of Electrical and Electronics Engineers Inc., 8058559

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

Delay-encoded harmonic imaging (DE-HI) in multiplane-wave compounding

Gong, P., Song, P. & Chen, S. D., Oct 31 2017, 2017 IEEE International Ultrasonics Symposium, IUS 2017. IEEE Computer Society, 8092620

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Delay-encoded harmonic imaging (DE-HI) in multiplane-wave compounding

Gong, P., Song, P. & Chen, S. D., Oct 31 2017, 2017 IEEE International Ultrasonics Symposium, IUS 2017. IEEE Computer Society, 8091955

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Dependency and AMR embeddings for drug-drug interaction extraction from biomedical literature

Wang, Y., Wang, L., Liu, S., Shen, F., Liu, H., Rastegar-Mojarad, M. & Liu, F., Aug 20 2017, ACM-BCB 2017 - Proceedings of the 8th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics. Association for Computing Machinery, Inc, p. 36-43 8 p. (ACM-BCB 2017 - Proceedings of the 8th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

10 Scopus citations

Detecting drinking-related contents on social media by classifying heterogeneous data types

ElTayeby, O., Eaglin, T., Abdullah, M., Burlinson, D., Dou, W. & Yao, L., Jan 1 2017, Advances in Artificial Intelligence: From Theory to Practice - 30th International Conference on Industrial Engineering and Other Applications of Applied Intelligent Systems, IEA/AIE 2017, Proceedings. Ali, M., Benferhat, S. & Tabia, K. (eds.). Springer Verlag, p. 364-373 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10351 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

Detection of increased vasa vasorum in artery walls: Improving CT number accuracy using image deconvolution

Rajendran, K., Leng, S., Jorgensen, S. M., Abdurakhimova, D., Ritman, E. L. & McCollough, C. H., 2017, Medical Imaging 2017: Physics of Medical Imaging. SPIE, Vol. 10132. 101323O

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations