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  • 2008

    Learning on weighted hypergraphs to integrate protein interactions and gene expressions for cancer outcome prediction

    Hwang, T., Tian, Z., Kuang, R. & Kocher, J. P., Dec 1 2008, Proceedings - 8th IEEE International Conference on Data Mining, ICDM 2008. p. 293-302 10 p. 4781124. (Proceedings - IEEE International Conference on Data Mining, ICDM).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    32 Scopus citations
  • LexSearch: An approach for leveraging semantic annotations to searching ontologies

    Pathak, J., Buntrock, J. D. & Chute, C. G., 2008, Semantic Scientific Knowledge Integration - Papers from the AAAI Spring Symposium, Technical Report. p. 68-73 6 p. (AAAI Spring Symposium - Technical Report; vol. SS-08-05).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Loss of urinary macromolecules in mice causes interstitial and intratubular renal calcification dependent on the underlying conditions

    Wu, X. R., Lieske, J. C., Evan, A. P., Sommer, A. J., Liaw, L. & Mo, L., Oct 22 2008, Renal Stone Disease 2 - 2nd International Urolithiasis Research Symposium. p. 113-119 7 p. (AIP Conference Proceedings; vol. 1049).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Mapping hippocampal degeneration in 400 subjects with a novel automated segmentation approach

    Morra, J. H., Tu, Z., Apostolova, L. G., Green, A. E., Avedissian, C., Madsen, S. K., Parikshak, N., Hua, X., Toga, A. W., Jack, C. R., Schuff, N., Weiner, M. W. & Thompson, P., 2008, 2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Proceedings, ISBI. p. 336-339 4 p. 4541001. (2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Proceedings, ISBI).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    9 Scopus citations
  • Micropatterned co-culture of embryonic stem cells with adult hepatocytes for directing hepatic differentiation

    Lee, J. Y., Tuleuova, N., Jones, C. N. & Revzin, A., 2008, AIChE100 - 2008 AIChE Annual Meeting, Conference Proceedings. (AIChE Annual Meeting, Conference Proceedings).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Modular ontology techniques and their applications in the biomedical domain

    Pathak, J., Johnson, T. M. & Chute, C. G., 2008, 2008 IEEE International Conference on Information Reuse and Integration, IEEE IRI-2008. p. 351-356 6 p. 4583056. (2008 IEEE International Conference on Information Reuse and Integration, IEEE IRI-2008).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    4 Scopus citations
  • Monte carlo simulation to determine conditions for optical molecular imaging of vascular disease

    Madzivire, M., Riederer, C. & Greenleaf, J., 2008, 2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Proceedings, ISBI. p. 169-172 4 p. 4540959. (2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Proceedings, ISBI).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Myocardial perfusion SPECT imaging de-noising: A phantom study - SPECT imaging de-noising

    Korfiatis, P., Karatrantou, A., Skiadopoulos, S., Arikidis, N., Costaridou, L., Panayiotakis, G., Apostolopoulos, D. & Vasilakos, P., Dec 29 2008, IST 2008 - IEEE Workshop on Imaging Systems and Techniques Proceedings. p. 104-108 5 p. 4659950. (IST 2008 - IEEE Workshop on Imaging Systems and Techniques Proceedings).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    1 Scopus citations
  • Newborn screening of metabolic disorders: Recent progress and future developments

    Rinaldo, P., Lim, J., Tortorelli, S., Gavrilov, D. & Matern, D., 2008, Nestle Nutrition Workshop Series: Pediatric Program. Vol. 62. p. 81-93 13 p. (Nestle Nutrition Workshop Series: Pediatric Program; vol. 62).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    20 Scopus citations
  • Optimization of spine surgery planning with 3D image templating tools

    Augustine, K. E., Huddleston, P. M., Holmes, D. R., Shridharani, S. M. & Robb, R. A., Jun 18 2008, Medical Imaging 2008 - Visualization, Image-Guided Procedures, and Modeling. 69181L. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6918).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    5 Scopus citations
  • Panel of gene-pair relative expression classifiers for stratifying various cancer and non-cancer diseases of the human brain

    Sung, J. & Price, N. D., Dec 1 2008, AIChE100 - 2008 AIChE Annual Meeting, Conference Proceedings. (AIChE Annual Meeting, Conference Proceedings).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Patient specific physical anatomy models

    Cameron, B. M., Holmes, D. R., Rettmann, M. E. & Robb, R. A., Jan 1 2008, Medicine Meets Virtual Reality 16 - Parallel, Combinatorial, Convergent: NextMed by Design, MMVR 2008. IOS Press, p. 68-73 6 p. (Studies in Health Technology and Informatics; vol. 132).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    3 Scopus citations
  • Planning the separation of conjoined twins with 3D medical imaging, scientific visualization and anatomic illustration

    Morreale, R. F., King, M. A., Matsumoto, J. M. S., Moir, C., Robb, R. A. & Bennet, K. E., Dec 1 2008, SIGGRAPH'08: ACM SIGGRAPH Talks 2008. 52. (SIGGRAPH'08: ACM SIGGRAPH Talks 2008).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Printing mems: From a single flexible polyimide film to three-dimensional integrated microfluidics

    Wang, W., Cong, H., Qiu, Z., Zhao, S., Zhu, H., Revzin, A. & Pan, T., 2008, 2008 Solid-State Sensors, Actuators, and Microsystems Workshop. Spangler, L. & Turner, K. L. (eds.). Transducer Research Foundation, p. 236-239 4 p. (Technical Digest - Solid-State Sensors, Actuators, and Microsystems Workshop).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Prior Image Constrained Compressed Sensing (PICCS)

    Chen, G. H., Tang, J. & Leng, S., 2008, Photons Plus Ultrasound: Imaging and Sensing 2008: The Ninth Conference on Biomedical Thermoacoustics, Optoacoustics, and Acousto-optics. 685618. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6856).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    56 Scopus citations
  • Processing of CT images for analysis of diffuse lung disease in the lung tissue research consortium

    Karwoski, R. A., Bartholmai, B., Zavaletta, V. A., Holmes, D. & Robb, R. A., Jun 2 2008, Medical Imaging 2008 - Physiology, Function, and Structure from Medical Images. 691614. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6916).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    5 Scopus citations
  • Progress in acceleration techniques in contrast-enhanced MRA

    Riederer, S. J., Dec 1 2008, Proceedings of the 8th IASTED International Conference on Visualization, Imaging, and Image Processing, VIIP 2008A. p. 13-17 5 p. (Proceedings of the 8th IASTED International Conference on Visualization, Imaging, and Image Processing, VIIP 2008).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Quantitative imaging of chemical composition using dual-energy, dual-source CT

    Liu, X., Primak, A. N., Lifeng, Y., McCollough, C. H. & Morin, R. L., Mar 1 2008, Medical Imaging 2008 - Physics of Medical Imaging. SPIE, 69134Z. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6913).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    4 Scopus citations
  • Recent structural and mechanistic insights into endplate acetylcholine receptors

    Sine, S. M., Gao, F., Lee, W. Y., Mukhtasimova, N., Wang, H. L. & Engel, A. G., Jun 2008, Myasthenia Gravis and Related Disorders 11th International Conference. Blackwell Publishing Inc., p. 53-60 8 p. (Annals of the New York Academy of Sciences; vol. 1132).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    1 Scopus citations
  • Recurrence based deterministic trends in EEG records of epilepsy patients

    Zhang, W., Worrell, G. & He, B., Sep 22 2008, 5th Int. Conference on Information Technology and Applications in Biomedicine, ITAB 2008 in conjunction with 2nd Int. Symposium and Summer School on Biomedical and Health Engineering, IS3BHE 2008. p. 391-394 4 p. 4570657. (5th Int. Conference on Information Technology and Applications in Biomedicine, ITAB 2008 in conjunction with 2nd Int. Symposium and Summer School on Biomedical and Health Engineering, IS3BHE 2008).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    5 Scopus citations
  • Reliability analysis of transcriptional regulatory networks

    Wang, C., Xuan, J., Chen, L., Hoffman, E. P. & Clarke, R., Dec 1 2008, International Conference on Bioinformatics, Computational Biology, Genomics and Chemoinformatics 2008, BCBGC 2008. p. 42-48 7 p. (International Conference on Bioinformatics, Computational Biology, Genomics and Chemoinformatics 2008, BCBGC 2008).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Removal of scalp reference signal and line noise for intracranial EEGs

    Hu, S., Stead, M. & Worrell, G. A., Aug 18 2008, Proceedings of 2008 IEEE International Conference on Networking, Sensing and Control, ICNSC. p. 1486-1491 6 p. 4525455. (Proceedings of 2008 IEEE International Conference on Networking, Sensing and Control, ICNSC).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    6 Scopus citations
  • Segmentation and volumetric measurement of renal cysts and parenchyma from MR images of polycystic kidneys using multi-spectral analysis method

    Bae, K. T., Commean, P. K., Brunsden, B. S., Baumgarten, D. A., King, B. F., Wetzel, L. H., Kenney, P. J., Chapman, A. B., Torres, V. E., Grantham, J. J., Guay-Woodford, L. M., Tao, C., Miller, J. P., Meyers, C. M. & Bennett, W. M., May 19 2008, Medical Imaging 2008: Image Processing. 691449. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6914).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    1 Scopus citations
  • Sequential delivery of dexamethasone and vegf to control local tissue response for carbon nanotube fluorescence based micro-capillary implantable sensors

    Sung, J., Barone, P. W., Kong, H. J. & Strano, M. S., 2008, AIChE100 - 2008 AIChE Annual Meeting, Conference Proceedings. (AIChE Annual Meeting, Conference Proceedings).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Sinogram smoothing with bilateral filtering for low-dose CT

    Lifeng, Y., Manduca, A., Trzasko, J. D., Khaylova, N., Kofler, J. M., McCollough, C. M. & Fletcher, J. G., May 14 2008, Medical Imaging 2008 - Physics of Medical Imaging. 691329. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6913).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    13 Scopus citations
  • Size-adapted segmentation of individualmammographie microcalcifications

    Arikidis, N. S., Karahaliou, A., Skiadopoulos, S., Korfiatis, P., Likaki, E., Panayiotakis, G. & Costaridou, L., Dec 1 2008, 8th IEEE International Conference on BioInformatics and BioEngineering, BIBE 2008. 4696833. (8th IEEE International Conference on BioInformatics and BioEngineering, BIBE 2008).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    3 Scopus citations
  • Stool detection in colonoscopy videos

    Hwang, S., Oh, J. H., Tavanapong, W., Wong, J. & De Groen, P. C., Dec 1 2008, Proceedings of the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS'08. p. 3004-3007 4 p. 4649835. (Proceedings of the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS'08 - "Personalized Healthcare through Technology").

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    11 Scopus citations
  • Symposium on patient safety

    Hallbeck, M. S. & Koneczny, S., Dec 1 2008, 52nd Human Factors and Ergonomics Society Annual Meeting, HFES 2008. p. 840-841 2 p. (Proceedings of the Human Factors and Ergonomics Society; vol. 2).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • System level approach for assessing and mitigating differential skew for 10+ Gbps SerDes applications

    Degerstrom, M. J., Buhrow, B. R., McCoy, B. O., Zabinski, P. J., Gilbert, B. K. & Daniel, E. S., Sep 15 2008, 2008 Proceedings 58th Electronic Components and Technology Conference, ECTC. p. 513-520 8 p. 4550021. (Proceedings - Electronic Components and Technology Conference).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    11 Scopus citations
  • The effect of sequential VEGF and BMP-2 release on ectopic and orthotopic bone regeneration

    Kempen, D. H. R., Lu, L., Heijink, A., Hefferan, T. E., Creemers, L. C., Maran, A., Yaszemski, M. J. & Dhert, W. J. A., 2008, 8th World Biomaterials Congress 2008. p. 312 1 p. (8th World Biomaterials Congress 2008; vol. 1).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • The role of the transcriptional coactivator p300 in prostate cancer progression

    Heemers, H. V., Debes, J. D. & Tindall, D. J., 2008, Hormonal Carcinogenesis V. Li, J., Li, S., Mohla, S., Rochefort, H., Rochefort, H. & Maudelonde, T. (eds.). p. 535-540 6 p. (Advances in Experimental Medicine and Biology; vol. 617).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    21 Scopus citations
  • Tomosynthesis via total variation minimization reconstruction and Prior Image Constrained Compressed Sensing (PICCS) on a C-arm system

    Nett, B., Tang, J., Leng, S. & Chen, G. H., 2008, Medical Imaging 2008 - Physics of Medical Imaging. 69132D. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6913).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    35 Scopus citations
  • Towards quantification of interstitial pneumonia patterns in lung multidetector CT

    Korfiatis, P., Karahaliou, A., Kazantzi, A., Kalogeropoulou, C. & Costaridou, L., Dec 1 2008, 8th IEEE International Conference on BioInformatics and BioEngineering, BIBE 2008. 4696813. (8th IEEE International Conference on BioInformatics and BioEngineering, BIBE 2008).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    5 Scopus citations
  • Validation of semi-automatic segmentation of the left atrium

    Rettmann, M. E., Holmes, D. R., Camp, J. J., Packer, D. L. & Robb, R. A., Jun 2 2008, Medical Imaging 2008 - Physiology, Function, and Structure from Medical Images. 691625. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6916).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    11 Scopus citations
  • Whole-body imaging of whole-organ, subresolution, basic functional unit (BFU) perfusion characteristics

    Dong, Y. & Ritman, E. L., Nov 21 2008, Developments in X-Ray Tomography VI. 707806. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 7078).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    2 Scopus citations
  • 2007

    3D morphological analysis of lung pathology

    Zavaletta, V. A., Bartholmai, B. J. & Robb, R. A., Nov 27 2007, 2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings. p. 308-311 4 p. 4193284. (2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    2 Scopus citations
  • Aequus communis sententia: Defining levels of interoperability

    Elkin, P. L., Froehling, D., Bauer, B. A., Wahner-Roedler, D., Rosenbloom, S. T., Bailey, K. R. & Brown, S. H., 2007, Studies in Health Technology and Informatics. Vol. 129. p. 725-729 5 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Aequus communis sententia: Defining levels of interoperability

    Elkin, P. L., Froehling, D., Bauer, B. A., Wahner-Roedler, D., Rosenbloom, S. T., Bailey, K. & Brown, S. H., 2007, MEDINFO 2007 - Proceedings of the 12th World Congress on Health (Medical) Informatics: Building Sustainable Health Systems. IOS Press, p. 725-729 5 p. (Studies in Health Technology and Informatics; vol. 129).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    13 Scopus citations
  • A new macromodeling approach for digital output drivers and application in simultaneous switching noise analysis

    Buhrow, B. R., Daniel, E. S. & Gilbert, B. K., Dec 1 2007, IEEE 16th Topical Meeting on Electrical Performance of Electronic Packaging, EPEP. p. 255-258 4 p. 4387175. (IEEE Topical Meeting on Electrical Performance of Electronic Packaging).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    1 Scopus citations
  • Applications of optimization routines in signal integrity analysis

    Zabinski, P., Buhrow, B., Gilbert, B. & Daniel, E., Dec 1 2007, International Engineering Consortium - DesignCon 2007. p. 1541-1564 24 p. (International Engineering Consortium - DesignCon 2007; vol. 3).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • A rapid link analysis technique using four-port scattering parameters

    McCoy, B., Coker, J., Techentin, R., Gilbert, B. & Daniel, E., Dec 1 2007, IEEE 16th Topical Meeting on Electrical Performance of Electronic Packaging, EPEP. p. 307-310 4 p. 4387188. (IEEE Topical Meeting on Electrical Performance of Electronic Packaging).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    1 Scopus citations
  • Are phosphatonins relevant in the pathogenesis of nephrolithiasis?

    Shaikh, A. & Kumar, R., May 11 2007, RENAL STONE DISEASE: 1st Annual International Urolithiasis Research Symposium. p. 170-175 6 p. (AIP Conference Proceedings; vol. 900).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • A service-oriented architecture for electric power transmission system asset management

    Pathak, J., Li, Y., Honavar, V. & McCalley, J., 2007, Service-Oriented Computing ICSOC 2006 - 4th International Conference, Workshops Proceedings. Springer Verlag, p. 26-37 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4652 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    18 Scopus citations
  • Automated 3D segmentation of lung fields in thin slice CT exploiting wavelet preprocessing

    Korfiatis, P., Skiadopoulos, S., Sakellaropoulos, P., Kalogeropoulou, C. & Costaridou, L., 2007, Computer Analysis of Images and Patterns - 12th International Conference, CAIP 2007, Proceedings. Springer Verlag, p. 237-244 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4673 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    10 Scopus citations
  • Automatic hidden-web table interpretation by sibling page comparison

    Tao, C. & Embley, D. W., 2007, Conceptual Modeling - ER 2007 - 26th International Conference on Conceptual Modeling, Proceedings. Springer Verlag, p. 566-581 16 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4801 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    8 Scopus citations
  • Automatic polyp region segmentation for colonoscopy images using watershed algorithm and ellipse segmentation

    Hwang, S., Oh, J. H., Tavanapong, W., Wong, J. & De Groen, P. C., Oct 18 2007, Medical Imaging 2007: Computer-Aided Diagnosis. PART 1 ed. 65141D. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6514, no. PART 1).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    3 Scopus citations
  • Automatic segmentation and Co-registration of gated CT angiography datasets: measuring abdominal aortic pulsatility

    Wentz, R., Manduca, A., Fletcher, J. G., Siddiki, H., Shields, R. C., Vrtiska, T., Spencer, G., Primak, A. N., Zhang, J., Nielson, T., McCollough, C. & Lifeng, Y., 2007, Medical Imaging 2007: Physiology, Function, and Structure from Medical Images. PART 2 ed. 65111I. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6511, no. PART 2).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    5 Scopus citations
  • Balanced low-loss Ka-band μ-coaxial hybrids

    Vanhille, K., Filipović, D., Nichols, C., Fontaine, D., Wilkins, W., Daniel, E. & Popović, Z., Oct 2 2007, 2007 IEEE MTT-S International Microwave Symposium Digest. p. 1157-1160 4 p. 4264034. (IEEE MTT-S International Microwave Symposium Digest).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    19 Scopus citations
  • Biomarker identification by knowledge-driven multi-level ICA and motif analysis

    Chen, L., Wang, C., Shih, I. M., Wang, T. L., Zhang, Z., Wang, Y., Clarke, R., Hoffman, E. & Xuan, J., Dec 1 2007, Proceedings - 6th International Conference on Machine Learning and Applications, ICMLA 2007. p. 560-566 7 p. 4457289. (Proceedings - 6th International Conference on Machine Learning and Applications, ICMLA 2007).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    1 Scopus citations
  • Business-activity driven search: Addressing the information needs of services professionals

    Rajamani, N., Devarakonda, M., Yu, D., Zadrozny, W. & Pathak, J., Oct 18 2007, Proceedings - 2007 IEEE International Conference on Services Computing, SCC 2007. p. 644-651 8 p. 4278715. (Proceedings - 2007 IEEE International Conference on Services Computing, SCC 2007).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    1 Scopus citations