Rochester, MN

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2009

Real-time phase boundary detection in colonoscopy videos

Oh, J., Rajbal, M. A., Muthukudage, J. K., Tavanapong, W., Wong, J. & De Groen, P. C., Nov 30 2009, ISPA 2009 - Proceedings of the 6th International Symposium on Image and Signal Processing and Analysis. p. 724-729 6 p. 5297638. (ISPA 2009 - Proceedings of the 6th International Symposium on Image and Signal Processing and Analysis).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

6 Scopus citations

Real-time video fusion using a distributed architecture in Robotic surgery

Kwartowitz, D. M., Rettmann, M. E., Holmes, D. R. & Robb, R. A., Jun 19 2009, Medical Imaging 2009: Visualization, Image-Guided Procedures, and Modeling. 72610Z. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7261).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Reference signal impact on EEG energy

Hu, S., Stead, M., Liang, H. & Worrell, G. A., Sep 10 2009, Advances in Neural Networks - ISNN 2009 - 6th International Symposium on Neural Networks, ISNN 2009, Proceedings. PART 3 ed. p. 605-611 7 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5553 LNCS, no. PART 3).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations

Removal of abdominal wall for 3D visualization and segmentation of organs in CT volume

Ding, F., Leow, W. K. & Venkatesh, S., Jan 1 2009, 2009 IEEE International Conference on Image Processing, ICIP 2009 - Proceedings. IEEE Computer Society, p. 3377-3380 4 p. 5413879. (Proceedings - International Conference on Image Processing, ICIP).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations

Reproducibility of aortic pulsatility measurements from ECG-gated abdominal CTA in patients with abdominal aortic aneurysms

Manduca, A., Fletcher, J. G., Wentz, R. J., Shields, R. C., Vrtiska, T. J., Siddiki, H. & Nielson, T., Jun 22 2009, Medical Imaging 2009: Biomedical Applications in Molecular, Structural, and Functional Imaging. 72620L. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7262).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

Semi-supervised learning of text classification on bacterial protein-protein interaction documents

Xu, G., Niu, Z., Uetz, P., Gao, X., Qin, X. & Liu, H., Nov 26 2009, Proceedings - 2009 International Joint Conference on Bioinformatics, Systems Biology and Intelligent Computing, IJCBS 2009. p. 263-270 8 p. 5260672. (Proceedings - 2009 International Joint Conference on Bioinformatics, Systems Biology and Intelligent Computing, IJCBS 2009).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

5 Scopus citations

Shearwave dispersion ultrasound vibrometry applied to in vivo myocardium

Pislaru, C., Urban, M. W., Nenadic, I. & Greenleaf, J. F., Jan 1 2009, Proceedings of the 31st Annual International Conference of the IEEE Engineering in Medicine and Biology Society: Engineering the Future of Biomedicine, EMBC 2009. IEEE Computer Society, p. 2891-2894 4 p. 5333114. (Proceedings of the 31st Annual International Conference of the IEEE Engineering in Medicine and Biology Society: Engineering the Future of Biomedicine, EMBC 2009).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

34 Scopus citations

Simulating visual impairment to detect hospital wayfinding difficulties

Rousek, J. B., Koneczny, S. & Hallbeck, M. S., Dec 1 2009, 53rd Human Factors and Ergonomics Society Annual Meeting 2009, HFES 2009. p. 531-535 5 p. (Proceedings of the Human Factors and Ergonomics Society; vol. 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations

Simulating visual impairment to detect hospital way-finding difficulties

Koneczny, S., Rousek, J. B. & Hallbeck, M. S., Jan 1 2009, Medicine Meets Virtual Reality 17 - NextMed: Design for/the Well Being. IOS Press, p. 133-135 3 p. (Studies in Health Technology and Informatics; vol. 142).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Single molecule diffusion coefficient estimation by image analysis of simulated CCD images to aid high-throughput screening

Song, P., Davis, L. M. & Bashford, G. R., Jan 1 2009, Proceedings of the 31st Annual International Conference of the IEEE Engineering in Medicine and Biology Society: Engineering the Future of Biomedicine, EMBC 2009. IEEE Computer Society, p. 1396-1399 4 p. 5334157. (Proceedings of the 31st Annual International Conference of the IEEE Engineering in Medicine and Biology Society: Engineering the Future of Biomedicine, EMBC 2009).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Software engineering education for bioinformatics

Umarji, M., Seaman, C., Koru, A. G. & Liu, H., Jan 1 2009, Proceedings - 22nd Conference on Software Engineering Education and Training, CSEET 2009. IEEE Computer Society, p. 216-223 8 p. 4812701. (Proceedings - 22nd Conference on Software Engineering Education and Training, CSEET 2009).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

11 Scopus citations

Tendinopathy discrimination using spatial frequency parameters and artificial neural networks

Song, P., Linstrom, K. R., Boye, A. J., Kulig, K., Burnfield, J. M. & Bashford, G. R., Dec 1 2009, 2009 IEEE International Ultrasonics Symposium and Short Courses, IUS 2009. 5441973. (Proceedings - IEEE Ultrasonics Symposium).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

Tensile material properties of skeletal muscle tissue in longitudinal and transverse directions

Morrow, D. A., Haut Donahue, T. L., Odegard, G. M. & Kaufman, K. R., Dec 1 2009, Proceedings of the ASME Summer Bioengineering Conference, SBC2008. PART B ed. p. 1027-1028 2 p. (Proceedings of the ASME Summer Bioengineering Conference, SBC2008; no. PART B).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

Texture based evaluation of Osseo integration of oral implants in dental panoramic radiography

Georgakopoulos, I., Tsantis, S., Korfiatis, P., Costaridou, L., Petsas, T. & Panayiotakis, G., Dec 1 2009, Final Program and Abstract Book - 9th International Conference on Information Technology and Applications in Biomedicine, ITAB 2009. 5394332. (Final Program and Abstract Book - 9th International Conference on Information Technology and Applications in Biomedicine, ITAB 2009).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

The Astrobiology Graduate Student Conference (AbGradCon)

Som, S. M., Domagal-Goldman, S., Wright, K., Boldt, M. & Antonio, M., Dec 1 2009, 60th International Astronautical Congress 2009, IAC 2009. p. 8390-8397 8 p. (60th International Astronautical Congress 2009, IAC 2009; vol. 10).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

The feasibility of integrating elastography measurements into mri-guided transurethral ultrasound therapy

Arani, A., Huang, Y., Bronskill, M. & Chopra, R., Jul 21 2009, 8th International Symposium on Therapeutic Ultrasound. p. 265-269 5 p. (AIP Conference Proceedings; vol. 1113).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Theoretical and experimental studies on group velocity for estimating the elasticity of arteries

Zhang, X. & Greenleaf, J. F., Dec 1 2009, 2009 IEEE International Ultrasonics Symposium and Short Courses, IUS 2009. 5441406. (Proceedings - IEEE Ultrasonics Symposium).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

The relationship between conductivity uncertainties and EEG source localization accuracy

Wang, G., Yang, L., Worrell, G. & He, B., Jan 1 2009, Proceedings of the 31st Annual International Conference of the IEEE Engineering in Medicine and Biology Society: Engineering the Future of Biomedicine, EMBC 2009. IEEE Computer Society, p. 4799-4802 4 p. 5332637. (Proceedings of the 31st Annual International Conference of the IEEE Engineering in Medicine and Biology Society: Engineering the Future of Biomedicine, EMBC 2009).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Validation of a finite element model of passive force and pressure in skeletal muscle

Morrow, D. A., Haut Donahue, T. L., Odegard, G. M. & Kaufman, K. R., Dec 1 2009, Proceedings of the ASME Summer Bioengineering Conference 2009, SBC2009. PART A ed. p. 339-340 2 p. (Proceedings of the ASME Summer Bioengineering Conference 2009, SBC2009; no. PART A).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Vibro-acoustography imaging applications for the prostate

Fatemi, M. & Mitri, F. G., Jan 1 2009, Proceedings of the 31st Annual International Conference of the IEEE Engineering in Medicine and Biology Society: Engineering the Future of Biomedicine, EMBC 2009. IEEE Computer Society, p. 4415-4419 5 p. 5333695. (Proceedings of the 31st Annual International Conference of the IEEE Engineering in Medicine and Biology Society: Engineering the Future of Biomedicine, EMBC 2009).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

Virtual pelvic anatomy and surgery simulator: An innovative tool for teaching pelvic surgical anatomy

Holubar, S. D., Hassinger, J. P., Dozois, E. J., Camp, J. C., Farley, D. R., Fidler, J. L., Pawlina, W. & Robb, R. A., Jan 1 2009, Medicine Meets Virtual Reality 17 - NextMed: Design for/the Well Being. IOS Press, p. 122-124 3 p. (Studies in Health Technology and Informatics; vol. 142).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

16 Scopus citations

Volumetric flow at the supraceliac and infrarenal levels in patients with abdominal aortic aneurysm: Waveforms and allometric scaling relationships

Les, A. S., Yeung, J. J., Young, P. M., Herfkens, R. J., Dalman, R. L. & Taylor, C. A., Dec 1 2009, Proceedings of the ASME Summer Bioengineering Conference 2009, SBC2009. PART B ed. p. 921-922 2 p. (Proceedings of the ASME Summer Bioengineering Conference 2009, SBC2009; no. PART B).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Wireless Instantaneous Neurotransmitter Concentration Sensing System (WINCS) for intraoperative neurochemical monitoring

Kimble, C. J., Johnson, D. M., Winter, B. A., Whitlock, S. V., Kressin, K. R., Horne, A. E., Robinson, J. C., Bledsoe, J. M., Tye, S. J., Chang, S. Y., Agnesi, F., Griessenauer, C. J., Covey, D., Shon, Y. M., Bennet, K. E., Garris, P. A. & Lee, K. H., Jan 1 2009, Proceedings of the 31st Annual International Conference of the IEEE Engineering in Medicine and Biology Society: Engineering the Future of Biomedicine, EMBC 2009. IEEE Computer Society, p. 4856-4859 4 p. 5332773. (Proceedings of the 31st Annual International Conference of the IEEE Engineering in Medicine and Biology Society: Engineering the Future of Biomedicine, EMBC 2009).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

31 Scopus citations
2008

A 35 GS/s 5-bit SiGe BiCMOS flash ADC with offset corrected exclusive-or comparator

Kertis, R. A., Humble, J. S., Daun-Lindberg, M. A., Philpott, R. A., Fritz, K. A., Schwab, D. J., Prairie, J. F., Gilbert, B. K. & Daniel, E. S., Dec 31 2008, 2008 IEEE Bipolar/BiCMOS Circuits and Technology Meeting. p. 252-255 4 p. 4662755. (Proceedings of the IEEE Bipolar/BiCMOS Circuits and Technology Meeting).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

13 Scopus citations

Accuracy of motor axon regeneration across single lumen and multi-channel poly(lactic-co-glycolic acid) (PLGA) nerve tubes

De Ruiter, G., Spinner, R., Malessy, M., Moore, M., Sorenson, E., Currier, B., Yaszemski, M. & Windebank, A., Dec 1 2008, 8th World Biomaterials Congress 2008. 1 p. (8th World Biomaterials Congress 2008; vol. 3).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Accurate resistance, inductance, capacitance, and conductance (RLCG) from uniform transmission line measurements

Degerstrom, M. J., Gilbert, B. K. & Daniel, E. S., Dec 1 2008, Electrical Performance of Electronic Packaging, EPEP 2008. p. 77-80 4 p. 4675881. (Electrical Performance of Electronic Packaging, EPEP).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

23 Scopus citations

A conceptual-model-based computational alembic for a web of knowledge

Embley, D. W., Liddle, S. W., Lonsdale, D., Nagy, G., Tijerino, Y., Clawson, R., Crabtree, J., Ding, Y., Jha, P., Lian, Z., Lynn, S., Padmanabhan, R. K., Peters, J., Tao, C., Watts, R., Woodbury, C. & Zitzelberger, A., Dec 5 2008, Conceptual Modeling - ER 2008 - 27th International Conference on Conceptual Modeling, Proceedings. p. 532-533 2 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5231 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

Adopting graph traversal techniques for context-driven value sets extraction from biomedical knowledge sources

Pathak, J., Jiang, G., Dwarkanath, S. O., Buntrock, J. D. & Chute, C. G., Sep 25 2008, Proceedings - IEEE International Conference on Semantic Computing 2008, ICSC 2008. p. 460-467 8 p. 4597226. (Proceedings - IEEE International Conference on Semantic Computing 2008, ICSC 2008).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

A feature selection algorithm capable of handling extremely large data dimensionality

Sun, Y., Todorovic, S. & Goodison, S., Oct 1 2008, Society for Industrial and Applied Mathematics - 8th SIAM International Conference on Data Mining 2008, Proceedings in Applied Mathematics 130. p. 530-540 11 p. (Society for Industrial and Applied Mathematics - 8th SIAM International Conference on Data Mining 2008, Proceedings in Applied Mathematics 130; vol. 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

18 Scopus citations

A fixed point method for homotopic ℓ0-minimization with application to MR image recovery

Trzasko, J. D. & Manduca, A., May 14 2008, Medical Imaging 2008 - Physics of Medical Imaging. 69130F. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6913).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations

A fuzzy c-means algorithm using a correlation metrics and gene ontology

Zhang, M., Therneau, T., McKenzie, M. A., Li, P. & Yang, P., Dec 1 2008, 2008 19th International Conference on Pattern Recognition, ICPR 2008. 4761672. (Proceedings - International Conference on Pattern Recognition).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

5 Scopus citations

Analysis of microarray titration experiments

Bebu, I., Seillier-Moiseiwitsch, F. & Liu, H., Dec 1 2008, Proceedings of the 2008 International Conference on Bioinformatics and Computational Biology, BIOCOMP 2008. p. 942-946 5 p. (Proceedings of the 2008 International Conference on Bioinformatics and Computational Biology, BIOCOMP 2008).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

A novel imaging beta probe for radioguided surgery

Thacker, S. C., Stack, B. C., Lowe, V., Gaysinskiy, V., Cool, S., Nagarkar, V. V. & Entine, G., Dec 1 2008, 2008 IEEE Nuclear Science Symposium Conference Record, NSS/MIC 2008. p. 3875-3878 4 p. 4774128. (IEEE Nuclear Science Symposium Conference Record).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

A novel micro optical probe for early diagnosis of upper gastrointestinal (GI) cancers

Garcia-Uribe, A., Balareddy, K. C., Zou, J., Wang, K. K. & Wang, L. V., Dec 1 2008, 2008 IEEE Sensors, SENSORS 2008. p. 910-913 4 p. 4716589. (Proceedings of IEEE Sensors).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Antibody microarrays for immunoisolation of T-cells and immunodetection of secreted cytokines

Zhu, H., Stybayeva, G., Ramanculov, E., Dandekar, S., George, M. & Revzin, A., Dec 1 2008, AIChE100 - 2008 AIChE Annual Meeting, Conference Proceedings. (AIChE Annual Meeting, Conference Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

A preliminary investigation of ROI-image reconstruction with the rebinned BPF algorithm

Bian, J., Xia, D., Yu, L., Sidky, E. Y. & Pan, X., May 14 2008, Medical Imaging 2008 - Physics of Medical Imaging. 69132I. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6913).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Automatic real-time capture and segmentation of endoscopy video

Stanek, S. R., Tavanapong, W., Wong, J. S., Oh, J. H. & De Groen, P. C., May 7 2008, Medical Imaging 2008: PACS and Imaging Informatics. 69190X. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6919).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

6 Scopus citations

Automatic skeletonization for 3D hepatic portal vein in CT angiography

Jingjing, L., Zhi, Z., Pengfei, S., Enmin, S., Daoyu, H. & Qingguo, X., Dec 1 2008, 2008 IEEE Nuclear Science Symposium Conference Record, NSS/MIC 2008. p. 5396-5399 4 p. 4774452. (IEEE Nuclear Science Symposium Conference Record).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

Bariatric surgery and stone disease

Lieske, J. C. & Kumar, R., Oct 22 2008, Renal Stone Disease 2 - 2nd International Urolithiasis Research Symposium. p. 189-193 5 p. (AIP Conference Proceedings; vol. 1049).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Biosurveillance evaluation of SNOMED CT's terminology (BEST Trial): Coverage of chief complaints

Elkin, P. L., Brown, S. H., Balas, A., Temesgen, Z., Wahner-Roedler, D., Froehling, D., Liebow, M., Trusko, B., Rosenbloom, S. T. & Poland, G., Jan 1 2008, Studies in Health Technology and Informatics. IOS Press, p. 797-802 6 p. (Studies in Health Technology and Informatics; vol. 136).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations

Broadband resonant-plate permittivity measurement technique for printed wiring boards aided by electromagnetic simulations

McCoy, B. O., Buhrow, B. R., Gilbert, B. K. & Daniel, E. S., Dec 1 2008, International Engineering Consortium - DesignCon 2008. p. 1286-1310 25 p. (International Engineering Consortium - DesignCon 2008).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

CAD of colon cancer on CT colonography cases without cathartic bowel preparation

Linguraru, M. G., Zhao, S., Van Uitert, R. L., Liu, J., Fletcher, J. G., Manduca, A. & Summers, R. M., Dec 1 2008, Proceedings of the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS'08. p. 2996-2999 4 p. 4649833. (Proceedings of the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS'08 - "Personalized Healthcare through Technology").

Research output: Chapter in Book/Report/Conference proceedingConference contribution

7 Scopus citations

Coherent x-ray scattering for discriminating bio-compatible materials in tissue scaffolds

Cui, C., Jorgensen, S. M., Eaker, D. R. & Ritman, E. L., Nov 21 2008, Developments in X-Ray Tomography VI. 70781S. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 7078).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

7 Scopus citations

Combining nomogram and microarray data for predicting prostate cancer recurrence

Sun, Y., Cai, Y. & Goodison, S., Dec 1 2008, 8th IEEE International Conference on BioInformatics and BioEngineering, BIBE 2008. 4696692. (8th IEEE International Conference on BioInformatics and BioEngineering, BIBE 2008).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations

Comparison of classification methods on protein-protein interaction document classification

Xu, G., Niu, Z., Uetz, P., Gao, X. & Liu, H., Dec 1 2008, Proceedings - 2008 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW. p. 83-90 8 p. 4686213. (Proceedings - 2008 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Composing web services through automatic reformulation of service specifications

Pathak, J., Basu, S. & Honavar, V., Sep 19 2008, Proceedings - 2008 IEEE International Conference on Services Computing, SCC 2008. p. 361-369 9 p. 4578483. (Proceedings - 2008 IEEE International Conference on Services Computing, SCC 2008; vol. 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

6 Scopus citations

Dendrimer-based nanodevices for sustained intravitreal drug delivery

Rajaguru, B., Kannan, R. M. & Iezzi, R., Dec 1 2008, AIChE100 - 2008 AIChE Annual Meeting, Conference Proceedings. (AIChE Annual Meeting, Conference Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Designing electroactive biointerface for spatiotemporal control of cell attachment and release

Shah, S., Zhu, H., Yan, J., Verkhoturov, S. & Revzin, A., Dec 1 2008, ECS Transactions - Electrochemical Nano/Biosensors. 22 ed. p. 17-25 9 p. (ECS Transactions; vol. 13, no. 22).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Developing patient-specific anatomic models for validation of cardiac ablation guidance procedures

Holmes, D., Rettmann, M., Cameron, B., Camp, J. & Robb, R., Jun 18 2008, Medical Imaging 2008 - Visualization, Image-Guided Procedures, and Modeling. 69181W. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6918).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

9 Scopus citations

Developmental restructuring of the creatine kinase system integrates mitochondrial energetics with stem cell cardiogenesis

Chung, S., Dzeja, P. P., Faustino, R. S. & Terzic, A., Dec 2008, Mitochondria and Oxidative Stress in Neurodegenerative Disorders. Blackwell Publishing Inc., p. 254-263 10 p. (Annals of the New York Academy of Sciences; vol. 1147).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

30 Scopus citations