Research Output 1971 2020

Filter
Conference contribution
2018
2 Citations (Scopus)

Considerations for automated machine learning in clinical metabolic profiling: Altered homocysteine plasma concentration associated with metformin exposure

Orlenko, A., Moore, J. H., Orzechowski, P., Olson, R. S., Cairns, J., Caraballo, P., Weinshilboum, R. M., Wang, L. M. & Breitenstein, M. K., Jan 1 2018, PACIFIC SYMPOSIUM ON BIOCOMPUTING 2018. 212669 ed. World Scientific Publishing Co. Pte Ltd, p. 460-471 12 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Learning systems
Plasmas
Metabolites
Feature extraction
Vitamins
2017
1 Citation (Scopus)

Data-driven longitudinal modeling and prediction of symptom dynamics in major depressive disorder: Integrating factor graphs and learning methods

Athreya, A. P., Banerjee, S. S., Neavin, D., Kaddurah-Daouk, R., Rush, A. J., Frye, M. A., Wang, L. M., Weinshilboum, R. M., Bobo, W. V. & Iyer, R. K., Oct 4 2017, 2017 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2017. Institute of Electrical and Electronics Engineers Inc., 8058559

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Integrating Factor
Factor Graph
Major Depressive Disorder
Data-driven
Antidepressive Agents
3 Citations (Scopus)

Life-iNet: A structured network-based knowledge exploration and analytics system for life sciences

Ren, X., Shen, J., Qu, M., Wang, X., Wu, Z., Zhu, Q., Jiang, M., Tao, F., Sinha, S., Liem, D., Ping, P., Weinshilboum, R. M. & Han, J., Jan 1 2017, ACL 2017 - 55th Annual Meeting of the Association for Computational Linguistics, Proceedings of System Demonstrations. Association for Computational Linguistics (ACL), p. 55-60 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

life sciences
Search engines
search engine
Tar
functionality
4 Citations (Scopus)

Unsupervised single-cell analysis in triple-negative breast cancer: A case study

Athreya, A. P., Gaglio, A. J., Kalbarczyk, Z. T., Iyer, R. K., Cairns, J., Kalari, K. R., Weinshilboum, R. M. & Wang, L. M., Jan 17 2017, Proceedings - 2016 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2016. Institute of Electrical and Electronics Engineers Inc., p. 556-563 8 p. 7822581

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Triple Negative Breast Neoplasms
Single-Cell Analysis
Genes
Metformin
Overlapping Genes
2015

Bioinformatics strategies for identifying regions of epigenetic deregulation associated with aberrant transcript splicing and RNA-editing

Champion, M. D., Hlady, R. A., Yan, H. D., Evans, J., Nie, J., Lee, J. H., Bogenberger, J., Nandakumar, K., Davila, J., Moore, R., Nair, A., O'Brien, D., Zhu, Y. X., Kortum, K. M., Ordog, T., Zhang, Z., Joseph, R. W., Stewart, A. K., Kocher, J-P., Jonasch, E. & 3 others, Robertson, K. D., Tibes, R. & Ho, T. H., 2015, BIOINFORMATICS 2015 - 6th International Conference on Bioinformatics Models, Methods and Algorithms, Proceedings; Part of 8th International Joint Conference on Biomedical Engineering Systems and Technologies, BIOSTEC 2015. SciTePress, p. 163-170 8 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

RNA Editing
Deregulation
Bioinformatics
Computational Biology
RNA
1 Citation (Scopus)

Using EHR-Linked Biobank Data to Study Metformin Pharmacogenomics

Breitenstein, M. K., Simon, G., Ryu, E., Armasu, S. M., Weinshilboum, R. M., Wang, L. M. & Pathak, J., 2015, Studies in Health Technology and Informatics. IOS Press, Vol. 210. p. 914-918 5 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Metformin
Medical problems
Genes
Proteins
Pharmacogenetics
2014

Encapsulation of butyrylcholinesterase with a cationic copolymer library

Flynn, N., Uchea, C., Pope, J., Hartson, S., Vupputuri, S., Geng, L., Brimijoin, W. S., Ranjan, A., Pope, C. & Ramsey, J. D., 2014, Food, Pharmaceutical and Bioengineering Division 2014 - Core Programming Area at the 2014 AIChE Annual Meeting. AIChE, Vol. 1. p. 124-125 2 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Butyrylcholinesterase
Encapsulation
Copolymers
2006

Optimizing EUDOC for the IBM eServer Blue Gene supercomputer

Pang, Y-P., Swartz, B., Smith, B., Mullins, T., Peters, A. & Musselman, R., 2006, Proceedings of the 2006 ACM/IEEE Conference on Supercomputing, SC'06. 1188635

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Supercomputers
Genes
Resource allocation
Scalability
Proteins
1992

Fluorescence of native and partially denatured variant-3 scorpion neurotoxin

Haydock, C., Sedarous, S. S. & Prendergast, F. G., 1992, Proceedings of SPIE - The International Society for Optical Engineering. Bellingham, WA, United States: Publ by Int Soc for Optical Engineering, Vol. 1640. p. 167-171 5 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Isomers
isomers
Fluorescence
guanidines
fluorescence
1990

Fluorescence of variant-3 scorpion neurotoxin: multiple decay components and multiple decay trytophan conformers

Haydock, C., Sedarous, S. S., Bajzer, Z. & Prendergast, F. G., 1990, Proceedings of SPIE - The International Society for Optical Engineering. Lakowicz, J. F. (ed.). Bellingham, WA, United States: Publ by Int Soc for Optical Engineering, Vol. 1204 pt 1. p. 92-99 8 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Isomers
Fluorescence
life (durability)
fluorescence
decay