Mayo Clinic

Research Output 1961 2020

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2011
26 Citations (Scopus)

Calibrationless parallel MRI using CLEAR

Trazasko, J. D. & Manduca, A., 2011, Conference Record - Asilomar Conference on Signals, Systems and Computers. p. 75-79 5 p. 6189958

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Magnetic resonance imaging
Imaging techniques
Computational complexity
Calibration
Data storage equipment
9 Citations (Scopus)

Camera deployment for video panorama generation in wireless visual sensor networks

Yildiz, E., Akkaya, K., Sisikoglu, E., Sir, M. & Guneydas, I., Dec 1 2011, Proceedings - 2011 IEEE InternationalSymposium on Multimedia, ISM 2011. p. 595-600 6 p. 6123413

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Sensor networks
Cameras
Costs
Sensors
5 Citations (Scopus)

Colon fold contour estimation for 3D visualization of colon structure from 2D colonoscopy images

Hong, D., Tavanapong, W., Wong, J., Oh, J. & De Groen, P. C., 2011, Proceedings - International Symposium on Biomedical Imaging. p. 121-124 4 p. 5872369

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Colonoscopy
Colon
Visualization
Endoscopy
Computer graphics
9 Citations (Scopus)

Color based stool region detection in colonoscopy videos for quality measurements

Muthukudage, J., Oh, J., Tavanapong, W., Wong, J. & De Groen, P. C., 2011, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). PART1 ed. Vol. 7087 LNCS. p. 61-72 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 7087 LNCS, no. PART1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Color
Percentage
Preparation
Randomized Controlled Trial
Diagnostic Accuracy

Comparison of optical and electrical links for highly-interconnected systems

Kruchowski, J., Sokolov, V., Harff, N. E., Nelson, M. A., Liou, K. Y., Cameron, G., Gilbert, B. K. & Daniel, E. S., 2011, DesignCon 2011. Vol. 3. p. 2266-2290 25 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Large scale systems
Dense wavelength division multiplexing
Multimode fibers
Optical links
Demonstrations

Computational modeling of ligaments and tendons a tribute to Dr. Savio Lau-Yuen Woo

An, K. N., 2011, ASME 2011 Summer Bioengineering Conference, SBC 2011. PARTS A AND B ed. p. 653-654 2 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Ligaments
Tendons
12 Citations (Scopus)

Computer-aided detection of retroflexion in colonoscopy

Wang, Y., Tavanapong, W., Wong, J., Oh, J. & De Groen, P. C., 2011, Proceedings - IEEE Symposium on Computer-Based Medical Systems. 5999137

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Endoscopy
Endoscopes
Colonoscopy
Mucous Membrane
Visualization

Computer-assisted diagnosis for quantitative image-based analysis of Crohn's disease in CT enterography

Näppi, J., Lee, J. G., Fletcher, J. G. & Yoshida, H., 2011, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Vol. 6668 LNCS. p. 84-90 7 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 6668 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Bootstrapping
Receiver Operating Characteristic Curve
Region of Interest
Support vector machines
Support Vector Machine

Control of a brain-computer interface using intracranial electrodes

Krusienski, D. J. & Shih, J. J., 2011, ASME 2011 6th Frontiers in Biomedical Devices Conference and Exhibition, BioMed 2011. American Society of Mechanical Engineers, p. 27-28 2 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Brain computer interface
Electrodes
5 Citations (Scopus)

Development of computer vision algorithm for surgical skill assessment

Islam, G., Kahol, K., Ferrara, J. & Gray, R., 2011, Lecture Notes of the Institute for Computer Sciences, Social-Informatics and Telecommunications Engineering. Vol. 70 LNICST. p. 44-51 8 p. (Lecture Notes of the Institute for Computer Sciences, Social-Informatics and Telecommunications Engineering; vol. 70 LNICST).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Computer vision
Sensors
Video cameras
Surgery
Simulators

Dynamic imaging of ictal rhythmic activity using dense-array EEG

Yang, L., Wilke, C., Brinkmann, B., Worrell, G. A. & He, B., 2011, Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS. p. 8271-8274 4 p. 6092039

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Electroencephalography
Seizures
Stroke
Imaging techniques
Physiologic Monitoring
5 Citations (Scopus)

Effective and accelerated informative frame filtering in colonoscopy videos using graphics processing unit

Karri, V. P., Oh, J., Tavanapong, W., Wong, J. & De Groen, P. C., 2011, BIOSIGNALS 2011 - Proceedings of the International Conference on Bio-Inspired Systems and Signal Processing. p. 119-124 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Program processors
Graphics processing unit
Mucous Membrane

Effect of surrounding tissue-mimicking gelatin in the mechanical properties of arteries

Bernal, M., Urban, M. W., Nenadic, I. Z. & Greenleaf, J. F., 2011, IFMBE Proceedings. Vol. 37. p. 501-505 5 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Gelatin
Elastic moduli
Tissue
Mechanical properties
Elasticity

Electrocortical source imaging of intracranial EEG data in epilepsy

Acar, Z. A., Palmer, J., Worrell, G. A. & Makeig, S., 2011, Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS. p. 3909-3912 4 p. 6090971

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Electroencephalography
Epilepsy
Stroke
Independent component analysis
Imaging techniques

Empirical ontologies for cohort identification

Wu, S., Wagholikar, K., Sohn, S., Kaggal, V. & Liu, H. D., 2011, NIST Special Publication.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Ontology

Evaluation of the dynamic mechanical behavior of polymer gel dosimeter

Vieira, S. L., Fatemi, M. & Carneiro, A. A. O., 2011, Pan American Health Care Exchanges, PAHCE 2011 - Conference, Workshops, and Exhibits. Cooperation / Linkages: An Independent Forum for Patient Care and Technology Support. p. 287-290 4 p. 5871906

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Elasticity Imaging Techniques
Dosimeters
Polymers
Gels
Shear waves
1 Citation (Scopus)

Expansion and dissemination of "A standardized accuracy and precision assessment technique"

Kwartowitz, D. M., Riti, R. E. & Holmes III, D. R., 2011, Progress in Biomedical Optics and Imaging - Proceedings of SPIE. Vol. 7964. 79642B

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Computer-Assisted Surgery
Surgery
Demonstrations
Visualization
Technology

Fast adaptation of pre-operative patient specific models to real-time intra-operative volumetric data streams

Cameron, B. M., Rettmann, M. E., Holmes III, D. R. & Robb, R. A., 2011, Studies in Health Technology and Informatics. Vol. 163. p. 99-104 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Catheters
Operative Time
Ultrasonics
Electrophysiology
Self organizing maps
2 Citations (Scopus)

Fourier space analysis of mechanical wave dispersion for transthoracic in vivo measurements of left-ventricular viscoelasticity

Nenadic, I. Z., Urban, M. W., Pislaru, C. D., Bernal, M. & Greenleaf, J. F., 2011, IFMBE Proceedings. Vol. 37. p. 520-523 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Mechanical waves
Viscoelasticity
Elasticity
Viscosity
Surface waves
2 Citations (Scopus)

Gene expression analysis with integrated fuzzy C-means and pathway analysis

Zhang, M., Adamu, B., Lin, C. C. & Yang, P., 2011, Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS. p. 936-939 4 p. 6090211

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Gene expression
Software
Workflow
Genes
Gene Expression
3 Citations (Scopus)

Generality and reuse in a common type system for clinical natural language processing

Wu, S. T., Kaggal, V. C., Savova, G. K., Liu, H. D., Dligach, D., Zheng, J., Chapman, W. W. & Chute, C. G., 2011, International Conference on Information and Knowledge Management, Proceedings. p. 27-34 8 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Natural language processing
Reuse
Electronic medical record
Web sites
Throughput
1 Citation (Scopus)

Hemodynamics of elastase-induced aneurysms in rabbit - A new high flow bifurcation model

Zeng, Z., Kallmes, D. F., Ding, Y. H., Kadirvel, R. D., Lewis, D. A., Dai, D. & Robertson, A. M., 2011, ASME 2011 Summer Bioengineering Conference, SBC 2011. PARTS A AND B ed. p. 267-268 2 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Pancreatic Elastase
Hemodynamics
3 Citations (Scopus)

High speed parallel signal crosstalk cancellation concept

Smutzer, C. M., Degerstrom, M. J., Gilbert, B. K. & Daniel, E. S., 2011, DesignCon 2011. Vol. 3. p. 2085-2109 25 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Crosstalk
Electric lines
Signal processing
Bandwidth
Data storage equipment

Human gene/protein synonym dictionary from WikiLinks

Wagholikar, K., Torii, M. & Liu, H. D., 2011, 2011 ACM Conference on Bioinformatics, Computational Biology and Biomedicine, BCB 2011. p. 462-464 3 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Glossaries
Genes
Proteins
Literature
Feasibility Studies
2 Citations (Scopus)

Incorporating a Gaussian model at the catheter tip for improved registration of preoperative surface models

Rettmann, M. E., Holmes III, D. R., Packer, D. L. & Robb, R. A., 2011, Progress in Biomedical Optics and Imaging - Proceedings of SPIE. Vol. 7964. 796411

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Catheters
arrhythmia
fibrillation
landmarks
Atrial Fibrillation
1 Citation (Scopus)

In vivo assessment of renal tissue viscoelasticity during acute and gradual renal ischemia

Amador, C., Urban, M. W., Chen, S. D. & Greenleaf, J. F., 2011, IEEE International Ultrasonics Symposium, IUS. p. 2102-2105 4 p. 6293249

Research output: Chapter in Book/Report/Conference proceedingConference contribution

ischemia
viscoelasticity
blood flow
kidneys
elastic properties
6 Citations (Scopus)

In vivo open and closed chest measurements of myocardial viscoelasticity through a heart cycle using Lamb wave Dispersion Ultrasound Vibrometry (LDUV)

Nenadic, I. Z., Urban, M. W., Pislaru, C. D., Bernal, M. & Greenleaf, J. F., 2011, IEEE International Ultrasonics Symposium, IUS. p. 17-20 4 p. 6293731

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Lamb waves
wave dispersion
chest
viscoelasticity
elastic properties
1 Citation (Scopus)

Lack of resetting of brain dynamics following psychogenic non-epileptic seizures

Faith, A., Krishnan, B., Roth, A., Kondylis, E., Williams, K., Sirven, J. & Iasemidis, L., 2011, Proceedings of the IASTED International Symposia on Imaging and Signal Processing in Healthcare and Technology, ISPHT 2011. p. 116-122 7 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

seizure
Brain
brain
Seizures
lack
3 Citations (Scopus)

Learning from positive and unlabeled documents for automated detection of alternative splicing sentences in MEDLINE abstracts

Chen, Y., Torii, M., Lu, C. T. & Liu, H. D., 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011. p. 530-537 8 p. 6112425

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Alternative Splicing
MEDLINE
Learning algorithms
Learning systems
Classifiers
3 Citations (Scopus)

Liver fat quantification using fast kVp-switching dual energy CT

Kriston, A., Mendonça, P., Silva, A. C., Paden, R. G., Pavlicek, W., Sahani, D., Janos Kis, B., Rusko, L., Okerlund, D. & Bhotika, R., 2011, Progress in Biomedical Optics and Imaging - Proceedings of SPIE. Vol. 7962. 79623W

Research output: Chapter in Book/Report/Conference proceedingConference contribution

fats
Oils and fats
liver
Liver
Fats
5 Citations (Scopus)

Managing complexity in pre-operative information management systems

Bouamrane, M. M., Mair, F. & Tao, C., 2011, International Conference on Information and Knowledge Management, Proceedings. p. 3-10 8 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Information management
Management system
Anesthesia
Precaution
Knowledge management
2 Citations (Scopus)

Managing interoperability and complexity inhealth systems: MIXHS'11 workshop summary

Bouamrane, M. M. & Tao, C., 2011, International Conference on Information and Knowledge Management, Proceedings. p. 2635-2636 2 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Interoperability
System complexity
Health information
Information systems
Domain knowledge

Measurements of viscoelasticity using the MR Elastography and Lamb wave Dispersion Ultrasound Vibrometry (LDUV)

Nenadic, I. Z., Aristizabal, S., Glaser, K. J., Humphrey, T. C., Mitchell, S. A. & Greenleaf, J. F., 2011, IEEE International Ultrasonics Symposium, IUS. p. 1167-1170 4 p. 6293733

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Lamb waves
wave dispersion
viscoelasticity
elastic properties
viscosity

Microtopography not nanotopography determines direct neuronal growth on aligned collagen hydrogels

Abu-Rub, M., Billiar, K., Rodriguez, B., Zeugolis, D., Windebank, A. J. & Pandit, A., 2011, 24th European Conference on Biomaterials - Annual Conference of the European Society for Biomaterials.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Hydrogels
Collagen

Model based user interface design for predicting lung cancer treatment outcomes

Zhang, M., Liu, Y., Jiang, Y., Sun, Z. D. & Yang, P., 2011, Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS. p. 75-78 4 p. 6089900

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Oncology
User interfaces
Lung Neoplasms
Software
Small Cell Lung Carcinoma

Modeling cortical source dynamics and interactions during seizure

Mullen, T., Acar, Z. A., Worrell, G. A. & Makeig, S., 2011, Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS. p. 1411-1414 4 p. 6090332

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Epilepsy
Seizures
Implanted Electrodes
Independent component analysis
Electroencephalography
6 Citations (Scopus)

Phase aberration in shear wave dispersion ultrasound vibrometry

Shi, Y., Xie, H., Shamdasani, V., Fraser, J., Robert, J. L., Zhou, S., Urban, M. W., Chen, S. D. & Greenleaf, J. F., 2011, IEEE International Ultrasonics Symposium, IUS. p. 2408-2411 4 p. 6293569

Research output: Chapter in Book/Report/Conference proceedingConference contribution

wave dispersion
S waves
aberration
pushing
attenuation

Plasmonic nanopore arrays for characterizing the binding of myelin growth promoting igm antibodies to supported lipid bilayers

Wittenberg, N. J., Im, H., Warrington, A. E., Rodriguez, M. & Oh, S. H., 2011, 15th International Conference on Miniaturized Systems for Chemistry and Life Sciences 2011, MicroTAS 2011. Vol. 2. p. 1089-1091 3 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Lipid bilayers
Nanopores
Antibodies
Surface plasmon resonance
Light transmission

Polymeric biomaterials: A history of use in musculoskeletal regenerative and reconstructive medicine

Zhang, W. B., Cheng, S. Z. D. & Yaszemski, M. J., 2011, ACS Symposium Series. American Chemical Society, Vol. 1080. p. 165-182 18 p. (ACS Symposium Series; vol. 1080).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Biocompatible Materials
Biomaterials
Scaffolds
Medicine
Polymers
4 Citations (Scopus)

Principal components regression: Multivariate, gene-based tests in imaging genomics

Hibar, D. P., Stein, J. L., Kohannim, O., Jahanshad, N., Jack, C. R. J., Weiner, M. W., Toga, A. W. & Thompson, P. M., 2011, Proceedings - International Symposium on Biomedical Imaging. p. 289-293 5 p. 5872408

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Genomics
Genes
Imaging techniques
Brain
Statistics
2 Citations (Scopus)

Quantitative assessment of thermal lesion stiffness in the liver: Initial ex vivo results

Xie, H., Zhou, S., Shamdasani, V., Shi, Y., Robert, J. L., Fraser, J., Chen, S. D. & Greenleaf, J. F., 2011, IEEE International Ultrasonics Symposium, IUS. p. 2098-2101 4 p. 6293557

Research output: Chapter in Book/Report/Conference proceedingConference contribution

liver
lesions
ablation
stiffness
radio frequencies

Referenceless stratification of parenchymal lung abnormalities

Raghunath, S., Rajagopalan, S., Karwoski, R. A., Bartholmai, B. J. & Robb, R. A., 2011, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). PART 3 ed. Vol. 6893 LNCS. p. 223-230 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 6893 LNCS, no. PART 3).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Stratification
Lung
Biomarkers
Pathology
Spatial distribution

Report on the panel discussion on harnessing biophotonics for better healthcare and the creation of an international microcirculation imaging lab

Leahy, M. J., Wang, R., Foster, S., Ritman, E., Wang, L., Steenbergen, W., Tromberg, B., Larin, K., Duncan, D., Tuchin, V. & Liebert, A., 2011, Progress in Biomedical Optics and Imaging - Proceedings of SPIE. Vol. 7898. 789801

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Microcirculation
Delivery of Health Care
Imaging techniques

Retrieval evaluation and distance learning from perceived similarity between endomicroscopy videos

André, B., Vercauteren, T., Buchner, A. M., Wallace, M. B. & Ayache, N., 2011, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). PART 3 ed. Vol. 6893 LNCS. p. 297-304 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 6893 LNCS, no. PART 3).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Content based retrieval
Distance Learning
Distance education
Retrieval
Content-based Retrieval
1 Citation (Scopus)

Robust shear wave speed measurement using comb-push ultrasound radiation force

Zhao, H., Song, P., Urban, M. W., Greenleaf, J. F. & Chen, S. D., 2011, IEEE International Ultrasonics Symposium, IUS. p. 1270-1273 4 p. 6293321

Research output: Chapter in Book/Report/Conference proceedingConference contribution

S waves
radiation
wave propagation
beamforming
muscles

Role of microcomputed tomography in microvascular imaging

Ritman, E. L., 2011, Progress in Biomedical Optics and Imaging - Proceedings of SPIE. Vol. 7898. 78980I

Research output: Chapter in Book/Report/Conference proceedingConference contribution

X-Ray Microtomography
Tomography
tomography
Tissue
Imaging techniques
7 Citations (Scopus)

SAPPHIRE middleware and software development kit for medical video analysis

Stanek, S. R., Tavanapong, W., Wong, J., Oh, J., Nawarathna, R. D., Muthukudage, J. & De Groen, P. C., 2011, Proceedings - IEEE Symposium on Computer-Based Medical Systems. 5999145

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Middleware
Software engineering
Software
Colonoscopy
Resource allocation

Shear wave construction with laterally moving radiation force excitations

Urban, M. W., Amador, C., Nabavizadeh, A., Greenleaf, J. F. & Chen, S. D., 2011, IEEE International Ultrasonics Symposium, IUS. p. 1266-1269 4 p. 6293277

Research output: Chapter in Book/Report/Conference proceedingConference contribution

S waves
radiation
excitation
signal to noise ratios
elastic properties
1 Citation (Scopus)

Shear wave speed measurements using ultrasound radiation force can be depth dependent

Zhao, H., Song, P., Urban, M. W., Kinnick, R. R., Yin, M., Greenleaf, J. F. & Chen, S. D., 2011, IEEE International Ultrasonics Symposium, IUS. p. 2392-2395 4 p. 6293185

Research output: Chapter in Book/Report/Conference proceedingConference contribution

S waves
radiation
transducers
stiffness
linear arrays

Shear wave speed measurement using an unfocused ultrasound push beam

Chen, S. D., Zhao, H., Song, P., Urban, M. W. & Greenleaf, J. F., 2011, IEEE International Ultrasonics Symposium, IUS. p. 1171-1174 4 p. 6293583

Research output: Chapter in Book/Report/Conference proceedingConference contribution

S waves
shear
radiation measurement
viscoelasticity
pathology