Mayo Clinic

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2012

Fracture risk assessment: Improved evaluation of vertebral integrity among metastatic cancer patients to aid in surgical decision-making

Augustine, K. E., Camp, J. J., Holmes III, D. R., Huddleston, P. M., Lu, L., Yaszemski, M. J., Robb, R. A. & Clinic, M., 2012, Progress in Biomedical Optics and Imaging - Proceedings of SPIE. Vol. 8317. 83171A

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Harmonization of detailed clinical models with clinical study data standards

Jiang, G. D., Evans, J., Oniki, T., Coyle, J., Bain, L., Huff, S., Kush, R. & Chute, C. G., 2012, International Conference on Information and Knowledge Management, Proceedings. p. 23-30 8 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

High performance non-uniform FFT on modern X86-based multi-core systems

Kalamkar, D. D., Trzaskoz, J. D., Sridharan, S., Smelyanskiy, M., Kim, D., Manduca, A., Shu, Y., Bernstein, M. A., Kaul, B. & Dubey, P., 2012, Proceedings of the 2012 IEEE 26th International Parallel and Distributed Processing Symposium, IPDPS 2012. p. 449-460 12 p. 6267881

Research output: Chapter in Book/Report/Conference proceedingConference contribution

5 Scopus citations

How do spatial and angular resolution affect brain connectivity maps from diffusion MRI?

Zhan, L., Franc, D., Patel, V., Jahanshad, N., Jin, Y., Mueller, B. A., Bernstein, M. A., Borowski, B. J., Jack, C. R. J., Toga, A. W., Lim, K. O. & Thompson, P. M., 2012, Proceedings - International Symposium on Biomedical Imaging. p. 1-4 4 p. 6235469

Research output: Chapter in Book/Report/Conference proceedingConference contribution

18 Scopus citations

Internal pressure of the human meniscal attachments during physiological and pathological loading

Abraham, A. C., Kaufman, K. R. & Donahue, T. L. H., 2012, ASME 2012 Summer Bioengineering Conference, SBC 2012. p. 451-452 2 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Liver segmentation using structured sparse representations

Singh, V., Wang, D., Tewfik, A. H. & Erickson, B. J., 2012, ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings. p. 565-568 4 p. 6287942

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Managing interoperability and compleXity in health systems - MIXHS'12

Tao, C. & Bouamrane, M. M., 2012, ACM International Conference Proceeding Series. p. 2758-2759 2 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Measure elasticity and viscosity using the out-of-plane shear wave

Zhao, H., Qiang, B., Amador, C., Song, P., Urban, M. W., Kinnick, R. R., Greenleaf, J. F. & Chen, S. D., 2012, IEEE International Ultrasonics Symposium, IUS. p. 212-215 4 p. 6562185

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

Measuring bladder viscoelasticity using ultrasound

Nenadic, I. Z., Qiang, B., Urban, M. W., Nabavizadeh, A., Greenleaf, J. F. & Fatemi, M., 2012, IEEE International Ultrasonics Symposium, IUS. p. 105-108 4 p. 6562369

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Model-free compression creep methods for differentiation of lesion from background tissue

Nabavizadehrafsanjani, A., Amador, C., Urban, M. W., Alizad, A., Agrawal, O., Greenleaf, J. F., Insana, M. F. & Fatemi, M., 2012, IEEE International Ultrasonics Symposium, IUS. p. 2533-2535 3 p. 6562517

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Modeling UIMA type system using web ontology language - Towards interoperability among UIMA-based NLP tools

Liu, H. D., Wu, S., Tao, C. & Chute, C., 2012, International Conference on Information and Knowledge Management, Proceedings. p. 31-36 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

Multivariate principal oscillation pattern analysis of ICA sources during seizure

Mullen, T., Worrell, G. A. & Makeig, S., 2012, Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS. p. 2921-2924 4 p. 6346575

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Muscle categorization using PDF estimation and Naive Bayes classification

Adel, T. M., Smith, B. E. & Stashuk, D. W., 2012, Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS. p. 2619-2622 4 p. 6346501

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Muscle categorization using quantitative needle electromyography: A 2-stage Gaussian mixture model based approach

Abdelmaseeh, M., Poupart, P., Smith, B. & Stashuk, D., 2012, Proceedings - 2012 11th International Conference on Machine Learning and Applications, ICMLA 2012. Vol. 1. p. 548-553 6 p. 6406621

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Ontology-based temporal relation modeling with map-reduce latent dirichlet allocations for big EHR data

Li, D., Tao, C., Liu, H. D. & Chute, C., 2012, Proceedings - 2nd International Conference on Cloud and Green Computing and 2nd International Conference on Social Computing and Its Applications, CGC/SCA 2012. p. 708-715 8 p. 6382894

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Optimizing semantic MEDLINE for translational science studies using semantic web technologies

Tao, C., Zhang, Y., Jiang, G. D., Bouamrane, M. M. & Chute, C. G., 2012, International Conference on Information and Knowledge Management, Proceedings. p. 53-57 5 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

11 Scopus citations

Phantom-based MRI corrections and power to track brain change

Ching, C. R. K., Hua, X., Ward, C., Gunter, J., Bernstein, M. A., Jack, C. R. J., Weiner, M. W. & Thompson, P. M., 2012, Proceedings - International Symposium on Biomedical Imaging. p. 1172-1175 4 p. 6235769

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Predicting temporal lobe volume on MRI from genotypes using L 1-L 2 regularized regression

Kohannim, O., Hibar, D. P., Jahanshad, N., Stein, J. L., Hua, X., Toga, A. W., Jack, C. R. J., Weinen, M. W. & Thompson, P. M., 2012, Proceedings - International Symposium on Biomedical Imaging. p. 1160-1163 4 p. 6235766

Research output: Chapter in Book/Report/Conference proceedingConference contribution

22 Scopus citations

Prioritization of hospital laboratory orders considering cancellation probabilities

Ghavrish, A., Sir, M. & Pasupathy, K. S., 2012, 62nd IIE Annual Conference and Expo 2012. Institute of Industrial Engineers, p. 1717-1723 7 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Proposed SKOS extensions for bioportal terminology services

Tao, C., Noy, N. F., Solbrig, H. R., Shah, N. H., Musen, M. A. & Chute, C. G., 2012, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Vol. 7185 LNCS. p. 342-349 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 7185 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Quantification of pulmonary vein morphology using centerline tracking

Rettmann, M. E., Gunawan, M. S., Holmes III, D. R., Packer, D. L. & Robb, R. A., 2012, Proceedings - International Symposium on Biomedical Imaging. p. 816-819 4 p. 6235673

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Quantitative image analytics for stratified pulmonary medicine

Raghunath, S., Rajagopalan, S., Karwoski, R., Bartholmai, B. J. & Robb, R., 2012, Proceedings - International Symposium on Biomedical Imaging. p. 1779-1782 4 p. 6235926

Research output: Chapter in Book/Report/Conference proceedingConference contribution

5 Scopus citations

Real-time phase boundary detection for colonoscopy videos using motion vector templates

Nawarathna, R., Oh, J., Muthukudage, J., Tavanapong, W., Wong, J. & De Groen, P. C., 2012, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Vol. 7601 LNCS. p. 116-125 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 7601 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

Requirements and strategy for the development of a pediatric drug ontology

Richesson, R., Pathak, J., McLeod, W., Blackmon, G. & Vehik, K., 2012, CEUR Workshop Proceedings. Vol. 897.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Shape-based analysis of right ventricular dysfunction associated with acute pulmonary embolism

Tajbakhsh, N., Xue, W., Wu, H., Liang, J., McMahon, E. M. & Belohlavek, M., 2012, Progress in Biomedical Optics and Imaging - Proceedings of SPIE. Vol. 8317. 83170G

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Shear wave speed measurement using repeated short push pulses

Zhao, H., Amador, C., Urban, M. W., Song, P., Greenleaf, J. F. & Chen, S. D., 2012, IEEE International Ultrasonics Symposium, IUS. p. 1854-1857 4 p. 6562182

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Small world network measures predict white matter degeneration in patients with early-stage mild cognitive impairment

Nir, T., Jahanshad, N., Jack, C. R. J., Weiner, M. W., Toga, A. W. & Thompson, P. M., 2012, Proceedings - International Symposium on Biomedical Imaging. p. 1405-1408 4 p. 6235831

Research output: Chapter in Book/Report/Conference proceedingConference contribution

13 Scopus citations

Spectral components of the P300 speller response in and adjacent to the hippocampus

Krusienski, D. J. & Shih, J. J., 2012, Conference Proceedings - IEEE International Conference on Systems, Man and Cybernetics. p. 274-277 4 p. 6377713

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Step count validation of a tri-axial accelerometer during walking and jogging

Fortune, E., Lugade, V., Morrow, M. M. M. & Kaufman, K. R., 2012, ASME 2012 Summer Bioengineering Conference, SBC 2012. p. 1065-1066 2 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Systematic analysis of cross-institutional medication description patterns in clinical notes

Sohn, S., Murphy, S. P., Jonnalagadda, S. R., Wagholikar, K., Wu, S. T., Chute, C. G., Liu, H. D. & Halgrim, S., 2012, Proceedings - 2012 IEEE 2nd Conference on Healthcare Informatics, Imaging and Systems Biology, HISB 2012. p. 118 1 p. 6366211

Research output: Chapter in Book/Report/Conference proceedingConference contribution

The Linked Clinical Data project: Applying Semantic Web technologies for clinical and translational research using electronic medical records

Pathak, J., Kiefer, R. C. & Chute, C. G., 2012, ACM International Conference Proceeding Series. p. 94-95 2 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

Towards event sequence representation, reasoning and visualization for EHR data

Tao, C., Wongsuphasawat, K., Clark, K., Plaisant, C., Shneiderman, B. & Chute, C. G., 2012, IHI'12 - Proceedings of the 2nd ACM SIGHIT International Health Informatics Symposium. p. 801-805 5 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

12 Scopus citations

Using semantic web technology to support ICD-11 textual definitions authoring

Jiang, G. D., Solbrig, H. R. & Chute, C. G., 2012, ACM International Conference Proceeding Series. p. 38-44 7 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

Validation and discovery of genotype-phenotype associations in chronic diseases using linked data

Pathak, J., Kiefer, R., Freimuth, R. & Chute, C., 2012, Studies in Health Technology and Informatics. Vol. 180. p. 549-553 5 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Validation of geometric measurements of the left atrium and pulmonary veins for analysis of reverse structural remodeling following ablation therapy

Rettmann, M. E., Holmes III, D. R., Gunawan, M. S., Ge, X., Karwoski, R. A., Breen, J. F., Packer, D. L. & Robb, R. A., 2012, Progress in Biomedical Optics and Imaging - Proceedings of SPIE. Vol. 8317. 831724

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Validation of static and dynamic activity detection using a tri-axial accelerometer and video

Lugade, V., Fortune, E., Morrow, M. M. M. & Kaufman, K. R., 2012, ASME 2012 Summer Bioengineering Conference, SBC 2012. p. 1067-1068 2 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2011

A case study of ICD-11 anatomy value set extraction from SNOMED CT

Jiang, G. D., Solbrig, H. R., Chalmers, R. J. G., Spackman, K., Rector, A. L. & Chute, C. G., 2011, CEUR Workshop Proceedings. Vol. 833. p. 133-138 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations

An exact algorithm for providing multi-perspective event coverage in Wireless Multimedia Sensor Networks

Yildiz, E., Akkaya, K., Sisikoglu, E. & Sir, M., Sep 12 2011, IWCMC 2011 - 7th International Wireless Communications and Mobile Computing Conference. p. 382-387 6 p. 5982564

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations

A noninvasive surface wave method for measuring the complex modulus of viscoelastic tissues

Qiang, B., Greenleaf, J. F. & Zhang, X., 2011, Proceedings - 2011 International Conference on Intelligent Computation and Bio-Medical Instrumentation, ICBMI 2011. p. 275-278 4 p. 6131762

Research output: Chapter in Book/Report/Conference proceedingConference contribution

An ontological representation of adverse drug events

Jiang, G. D., Duke, J. D., Pathak, J. & Chute, C. G., 2011, CEUR Workshop Proceedings. Vol. 833. p. 329-331 3 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

An optimization-based approach for connecting partitioned mobile sensor/Actuator Networks

Sir, M., Senturk, I. F., Sisikoglu, E. & Akkaya, K., Jul 26 2011, 2011 IEEE Conference on Computer Communications Workshops, INFOCOM WKSHPS 2011. p. 525-530 6 p. 5928869

Research output: Chapter in Book/Report/Conference proceedingConference contribution

42 Scopus citations

A simple statistical model and association rule filtering for classification

Simon, G. J., Kumar, V. & Li, P. W., 2011, Proceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining. p. 823-831 9 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

16 Scopus citations

A simulation-based methodology for uncertainty modeling and analysis of clinical laboratory measurement processes

Ramamohan, V., Chandrasekar, V., Yih, Y., Abbott, J. & Klee, G., 2011, 61st Annual IIE Conference and Expo Proceedings. Institute of Industrial Engineers

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

A simulation tool to support recovery bed planning for surgical patients

Marmor, Y. N., Rohleder, T. R., Huschka, T., Cook, D. & Thompson, J., 2011, Proceedings - Winter Simulation Conference. p. 1333-1339 7 p. 6147854

Research output: Chapter in Book/Report/Conference proceedingConference contribution

5 Scopus citations

A user friendly system for ultrasound carotid intima-media thickness image interpretation

Zhu, X., Kendall, C. B., Hurst, R. T. & Liang, J., 2011, Progress in Biomedical Optics and Imaging - Proceedings of SPIE. Vol. 7968. 79681G

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

Automated detection of Focal Cortical Dysplasia lesions on T1-weighted MRI using volume-based distributional features

Yang, C. A., Kaveh, M. & Erickson, B. J., 2011, Proceedings - International Symposium on Biomedical Imaging. p. 865-870 6 p. 5872541

Research output: Chapter in Book/Report/Conference proceedingConference contribution

5 Scopus citations

Automatic verification and validation of a CAS simulation of an intensive care unit

Eichelberger, C. N., Hadzikadic, M., Gajic, O. & Li, G., 2011, AAAI Fall Symposium - Technical Report. Vol. FS-11-03. p. 44-48 5 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Automating pin field modeling for SerDes channel simulations

Degerstrom, M. J., Zahn, S. K., McCoy, B. O., Daniel, E. S. & Gilbert, B. K., 2011, Proceedings - Electronic Components and Technology Conference. p. 501-508 8 p. 5898558

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

Biomedical spectral x-ray imaging; Promises and challenges

Jorgensen, S. M., Eaker, D. R. & Ritman, E. L., 2011, Proceedings of SPIE - The International Society for Optical Engineering. Vol. 8140.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Biomedical spectral x-ray imaging; Promises and challenges

Jorgensen, S. M., Eaker, D. R. & Ritman, E. L., 2011, Proceedings of SPIE - The International Society for Optical Engineering. Vol. 8139. 813901

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations