Health Sciences Research

Research Output 1979 2020

Filter
Conference contribution
2019

Analyzing Early Signals of Older Adult Cognitive Impairment in Electronic Health Records

Goudarzvand, S., St. Sauver, J., Mielke, M. M., Takahashi, P. Y. & Sohn, S., Jan 21 2019, Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018. Schmidt, H., Griol, D., Wang, H., Baumbach, J., Zheng, H., Callejas, Z., Hu, X., Dickerson, J. & Zhang, L. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 1636-1640 5 p. 8621278. (Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Electronic Health Records
Health
Activities of Daily Living
Aging of materials
Semantics

Annotating Cohort Data Elements with OHDSI Common Data Model to Promote Research Reproducibility

Zhao, Y., Wang, Y., Wang, H., Yan, B., Shen, F., Peterson, K. J., Rocca, W. A., St. Sauver, J. & Liu, H. D., Jan 21 2019, Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018. Schmidt, H., Griol, D., Wang, H., Baumbach, J., Zheng, H., Callejas, Z., Hu, X., Dickerson, J. & Zhang, L. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 1310-1317 8 p. 8621269. (Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Informatics
Electronic Health Records
Data structures
Health
Epidemiology

Building a Research-Quality Copy Number Variation Data Repository for Translational Research

Wang, C., Moore, R. M., Evans, J. M., Hou, X., John Weroha, S. & Jiang, G. D., Jan 1 2019, Heterogeneous Data Management, Polystores, and Analytics for Healthcare - VLDB 2018 Workshops, Poly and DMAH, 2018, Revised Selected Papers. Stonebraker, M., Wang, F., Gadepally, V., Teodoro, G., Mattson, T. & Luo, G. (eds.). Springer Verlag, p. 148-161 14 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11470 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Repository
Data integration
Schema
Data Reuse
Ovarian Cancer

Design and pilot testing of an English and Spanish behavioral health patient survey on data privacy

Aliste, M. P., Grando, A., Murcko, A., Soni, H., Todd, M., Mukundan, M., Saks, M., Horrow, C., Sharp, R. R., Dye, C., Chern, D., Whitfield, M. J. & Callesen, M., Aug 21 2019, MEDINFO 2019: Health and Wellbeing e-Networks for All - Proceedings of the 17th World Congress on Medical and Health Informatics. Seroussi, B., Ohno-Machado, L., Ohno-Machado, L. & Seroussi, B. (eds.). IOS Press, p. 1891-1892 2 p. (Studies in Health Technology and Informatics; vol. 264).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Data privacy
Privacy
Health Surveys
Hispanic Americans
Health

Detecting Serendipitous Drug Usage in Social Media with Deep Neural Network Models

Ru, B., Li, D. & Yao, L., Jan 21 2019, Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018. Schmidt, H., Griol, D., Wang, H., Baumbach, J., Zheng, H., Callejas, Z., Hu, X., Dickerson, J. & Zhang, L. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 1083-1090 8 p. 8621252. (Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Social Media
Neural Networks (Computer)
Pharmaceutical Preparations
Long-Term Memory
Short-Term Memory

Developing customizable cancer information extraction modules for pathology reports using clamp

Soysal, E., Warner, J. L., Wang, J., Jiang, M., Harvey, K., Jain, S. K., Dong, X., Song, H. Y., Siddhanamatha, H., Wang, L., Dai, Q., Chen, Q., Du, X., Tao, C., Yang, P., Denny, J. C., Liu, H. D. & Xu, H., Aug 21 2019, MEDINFO 2019: Health and Wellbeing e-Networks for All - Proceedings of the 17th World Congress on Medical and Health Informatics. Seroussi, B., Ohno-Machado, L., Ohno-Machado, L. & Seroussi, B. (eds.). IOS Press, p. 1041-1045 5 p. (Studies in Health Technology and Informatics; vol. 264).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Information Storage and Retrieval
Clamping devices
Pathology
Natural Language Processing
Processing

Evaluation of interventions for psychiatric care: A simulation study of the effect on emergency departments

Roh, T., Quinones-Avila, V., Campbell, R. L., Melin, G. & Pasupathy, K. S., Jan 31 2019, WSC 2018 - 2018 Winter Simulation Conference: Simulation for a Noble Cause. Institute of Electrical and Electronics Engineers Inc., p. 2507-2517 11 p. 8632521. (Proceedings - Winter Simulation Conference; vol. 2018-December).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Emergency
Health
Simulation Study
Evaluation
Discrete event simulation

Integrating word embedding neural networks with pubmed abstracts to extract keyword proximity of chronic diseases

Tafti, A. P., Wang, Y., Shen, F., Sagheb, E., Kingsbury, P. & Liu, H., May 2019, 2019 IEEE EMBS International Conference on Biomedical and Health Informatics, BHI 2019 - Proceedings. Institute of Electrical and Electronics Engineers Inc., 8834626. (2019 IEEE EMBS International Conference on Biomedical and Health Informatics, BHI 2019 - Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

PubMed
Terminology
Chronic Disease
Neural networks
Social Media
1 Citation (Scopus)

Leveraging Association Rule Mining to Detect Pathophysiological Mechanisms of Chronic Kidney Disease Complicated by Metabolic Syndrome

Peng, S., Fan, Y., Wang, L., Wen, A., Liu, X., Liu, H. D. & Shen, F., Jan 21 2019, Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018. Schmidt, H., Griol, D., Wang, H., Baumbach, J., Zheng, H., Callejas, Z., Hu, X., Dickerson, J. & Zhang, L. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 1302-1309 8 p. 8621226. (Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Association rules
Chronic Renal Insufficiency
Semantics
MEDLINE
Triglycerides

Mapping Common Data Elements to a Domain Model Using an Artificial Neural Network

Renner, R., Li, S., Huang, Y., Tan, S., Li, D., Zijp-Tan, A. C. V. D., Benton, R., Borchert, G. M., Huang, J. & Jiang, G. D., Jan 21 2019, Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018. Schmidt, H., Griol, D., Wang, H., Baumbach, J., Zheng, H., Callejas, Z., Hu, X., Dickerson, J. & Zhang, L. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 1532-1535 4 p. 8621535. (Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Biomedical Research
Neural networks
Common Data Elements
Personnel
Research Personnel

OpenHI - An open source framework for annotating histopathological image

Puttapirat, P., Zhang, H., Lian, Y., Wang, C., Zhang, X., Yao, L. & Li, C., Jan 21 2019, Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018. Schmidt, H., Griol, D., Wang, H., Baumbach, J., Zheng, H., Callejas, Z., Hu, X., Dickerson, J. & Zhang, L. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 1076-1082 7 p. 8621393. (Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Crowdsourcing
Genetic Association Studies
Intelligent systems
Semantics
Software

Perceptions and preferences about granular data sharing and privacy of behavioral health patients

Soni, H., Aliste, M. P., Murcko, A., Todd, M., Mukundan, M., Saks, M., Horrow, C., Sharp, R. R., Dye, C., Chern, D., Whitfield, M. J., Callesen, M. & Grando, A., Aug 21 2019, MEDINFO 2019: Health and Wellbeing e-Networks for All - Proceedings of the 17th World Congress on Medical and Health Informatics. Seroussi, B., Ohno-Machado, L., Ohno-Machado, L. & Seroussi, B. (eds.). IOS Press, p. 1361-1365 5 p. (Studies in Health Technology and Informatics; vol. 264).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Information Dissemination
Privacy
Health
Health Services Research
Hispanic Americans

Relationship between very cold outside weather and surgical outcome: Integrating shallow and deep artificial neural nets

Tafti, A. P., Dong, Y., Habermann, E. B., Liu, H. D. & Herasevich, V. D., Aug 21 2019, MEDINFO 2019: Health and Wellbeing e-Networks for All - Proceedings of the 17th World Congress on Medical and Health Informatics. Seroussi, B., Ohno-Machado, L., Ohno-Machado, L. & Seroussi, B. (eds.). IOS Press, p. 1783-1784 2 p. (Studies in Health Technology and Informatics; vol. 264).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Weather
Orthopedics
Surgery
Length of Stay
Neural networks

Stratified mortality prediction of patients with acute kidney injury in critical care

Xu, Z., Luo, Y., Adekkanattu, P., Ancker, J. S., Jiang, G. D., Kiefer, R. C., Pacheco, J. A., Rasmussen, L. V., Pathak, J. & Wang, F., Aug 21 2019, MEDINFO 2019: Health and Wellbeing e-Networks for All - Proceedings of the 17th World Congress on Medical and Health Informatics. Seroussi, B., Ohno-Machado, L., Ohno-Machado, L. & Seroussi, B. (eds.). IOS Press, p. 462-466 5 p. (Studies in Health Technology and Informatics; vol. 264).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Critical Care
Acute Kidney Injury
Mortality
Learning systems
Critical Illness

Temporal sequence alignment in electronic health records for computable patient representation

Huang, M., Zolnoori, M., Shah, N. D. & Yao, L., Jan 21 2019, Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018. Schmidt, H., Griol, D., Wang, H., Baumbach, J., Zheng, H., Callejas, Z., Hu, X., Dickerson, J. & Zhang, L. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 1054-1061 8 p. 8621428. (Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Sequence Alignment
Electronic Health Records
Health
Medical Records
Databases
2018

A Natural Language Processing Approach to Acquire Accurate Health Provider Directory Information

Cook, M., Yao, L. & Wang, X., Jul 16 2018, Proceedings - 2018 IEEE International Conference on Healthcare Informatics Workshops, ICHI-W 2018. Institute of Electrical and Electronics Engineers Inc., p. 76-77 2 p. 8411813

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Natural Language Processing
Directories
Health
Licensure
Nurse Midwives

A pilot study characterising interruptions experienced by emergency medicine residents

Forsyth, K. L., Hawthorne, H. J., El-Shcrif, N., Pagel, S. M. & Blocker, R. C., Jan 1 2018, 62nd Human Factors and Ergonomics Society Annual Meeting, HFES 2018. Human Factors and Ergonomics Society Inc., p. 474-477 4 p. (Proceedings of the Human Factors and Ergonomics Society; vol. 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Medicine
medicine
resident
graduate
workflow

A publication-based popularity index (PPI) for healthcare dataset ranking

Shi, J., Zheng, M., Yao, L. & Ge, Y., Jul 24 2018, Proceedings - 2018 IEEE International Conference on Healthcare Informatics, ICHI 2018. Institute of Electrical and Electronics Engineers Inc., p. 247-254 8 p. 8419368

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Publications
Delivery of Health Care
Health
Learning systems
Datasets

Automatic Extraction of Major Osteoporotic Fractures from Radiology Reports using Natural Language Processing

Wang, Y., Mehrabi, S., Sohn, S., Atkinson, E., Amin, S. & Liu, H. D., Jul 16 2018, Proceedings - 2018 IEEE International Conference on Healthcare Informatics Workshops, ICHI-W 2018. Institute of Electrical and Electronics Engineers Inc., p. 64-65 2 p. 8411807

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Natural Language Processing
Osteoporotic Fractures
Radiology
Wrist
Femur
1 Citation (Scopus)

BioCreative/OHNLP Challenge 2018

Rastegar-Mojarad, M., Liu, S., Wang, Y., Afzal, N., Wang, L., Shen, F., Fu, S. & Liu, H. D., Aug 15 2018, ACM-BCB 2018 - Proceedings of the 2018 ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics. Association for Computing Machinery, Inc, 1 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Natural Language Processing
Confidentiality
Processing
Education
Information Storage and Retrieval
3 Citations (Scopus)

Constructing Node Embeddings for Human Phenotype Ontology to Assist Phenotypic Similarity Measurement

Shen, F., Liu, S., Wang, Y., Wang, L., Wen, A., Limper, A. H. & Liu, H. D., Jul 16 2018, Proceedings - 2018 IEEE International Conference on Healthcare Informatics Workshops, ICHI-W 2018. Institute of Electrical and Electronics Engineers Inc., p. 29-33 5 p. 8411677

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Phenotype
Idiopathic Pulmonary Fibrosis
Precision Medicine
Vocabulary
Node

Deep Learning for Better Variant Calling for Cancer Diagnosis and Treatment

Ramachandran, A., Li, H., Klee, E. W., Lumetta, S. S. & Chen, D., Feb 20 2018, ASP-DAC 2018 - 23rd Asia and South Pacific Design Automation Conference, Proceedings. Institute of Electrical and Electronics Engineers Inc., Vol. 2018-January. p. 16-21 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

DNA
Throughput
Molecular biology
Bioinformatics
Gene expression
1 Citation (Scopus)

LSTM for septic shock: Adding unreliable labels to reliable predictions

Zhang, Y., Lin, C., Chi, M., Ivy, J., Capan, M. & Huddleston, J. M., Jan 12 2018, Proceedings - 2017 IEEE International Conference on Big Data, Big Data 2017. Institute of Electrical and Electronics Engineers Inc., Vol. 2018-January. p. 1233-1242 10 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Memory Term
Labels
Shock
Prediction
Moment

Methodology for co-creating provider-centered interventions for mitigating interruptions in the emergency department

Blocker, R. C., Forsyth, K. L. & Hawthorne, H. J., Jan 1 2018, 62nd Human Factors and Ergonomics Society Annual Meeting, HFES 2018. Human Factors and Ergonomics Society Inc., p. 485-488 4 p. (Proceedings of the Human Factors and Ergonomics Society; vol. 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

methodology
information policy
PC
work environment
workload
1 Citation (Scopus)

Mini breaks, many benefits: Development and pilot testing of an intraoperative microbreak stretch web-application for surgeons

Abdelall, E. S., Lowndes, B. R., Abdelrahman, A. M., Hawthome, H. J. & Hallbeck, M. S., Jan 1 2018, 62nd Human Factors and Ergonomics Society Annual Meeting, HFES 2018. Human Factors and Ergonomics Society Inc., p. 1042-1046 5 p. (Proceedings of the Human Factors and Ergonomics Society; vol. 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

pain
Stretching
Testing
fatigue
performance

Perceived workload and an automated workload alert system: A comparison in the emergency department

Forsyth, K. L., Hawthorne, H. J., Cammon, W. D., Linden, A. R. & Blocker, R. C., Jan 1 2018, 62nd Human Factors and Ergonomics Society Annual Meeting, HFES 2018. Human Factors and Ergonomics Society Inc., p. 573-577 5 p. (Proceedings of the Human Factors and Ergonomics Society; vol. 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

workload
Chemical activation
staffing
activation
multi-level system

Predicting time to first treatment in chronic lymphocytic leukemia using machine learning survival and classification methods

Chen, D., Goyal, G., Go, R., Parikh, S. A. & Ngufor, C., Jul 24 2018, Proceedings - 2018 IEEE International Conference on Healthcare Informatics, ICHI 2018. Institute of Electrical and Electronics Engineers Inc., p. 407-408 2 p. 8419409

Research output: Chapter in Book/Report/Conference proceedingConference contribution

B-Cell Chronic Lymphocytic Leukemia
Learning systems
Survival Analysis
Classifiers
Machine Learning

Simulating triage of patients into an internal medicine department to validate the use of an optimization-based workload score

Agor, J., McKenzie, K., Mayorga, M. E., Ozaltin, O., Parikh, R. S. & Huddleston, J., Jan 4 2018, 2017 Winter Simulation Conference, WSC 2017. Institute of Electrical and Electronics Engineers Inc., Vol. Part F134102. p. 2881-2892 12 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Medicine
Workload
Internal
Optimization
Division

Surgeons' perspectives on user-designed prototypes of microsurgery armrests

Abdelrahman, A. M., Lowndes, B. R., Mohan, A. T., Noland, S. S., Finnie, D. M., Lemaine, V. & Hallbeck, M. S., Jan 1 2018, 62nd Human Factors and Ergonomics Society Annual Meeting, HFES 2018. Human Factors and Ergonomics Society Inc., p. 1047-1051 5 p. (Proceedings of the Human Factors and Ergonomics Society; vol. 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

ergonomics
Ergonomics
interview
health risk
surgery

Terminology enabled spatio-temporal analysis and visualization for preterm birth data in the US

Wang, K. & Yao, L., Jan 1 2018, HEALTHINF 2018 - 11th International Conference on Health Informatics, Proceedings; Part of 11th International Joint Conference on Biomedical Engineering Systems and Technologies, BIOSTEC 2018. Zwiggelaar, R., Fred, A., Gamboa, H. & Bermudez i Badia, S. (eds.). SciTePress, Vol. 5. p. 510-518 9 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Spatio-Temporal Analysis
Premature Birth
Terminology
Data structures
Visualization
2017
3 Citations (Scopus)

A comprehensive (biological and computational) investigation on the role of microRNA::mRNA regulations performed in chronic obstructive pulmonary disease and lung cancer

Huang, J., Dou, D., She, J., Limper, A. H., Yang, Y. D. & Yang, P., Jan 17 2017, Proceedings - 2016 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2016. Institute of Electrical and Electronics Engineers Inc., p. 1062-1067 6 p. 7822669

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Pulmonary diseases
MicroRNAs
Chronic Obstructive Pulmonary Disease
Lung Neoplasms
Messenger RNA
1 Citation (Scopus)

A consensus-based approach for harmonizing the ohdsi common data model with HL7 FHIR

Jiang, G. D., Kiefer, R. C., Sharma, D. K., Prud'hommeaux, E. & Solbrig, H. R., Jan 1 2017, MEDINFO 2017: Precision Healthcare through Informatics - Proceedings of the 16th World Congress on Medical and Health Informatics. IOS Press, Vol. 245. p. 887-891 5 p. (Studies in Health Technology and Informatics; vol. 245).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Interoperability
Data structures
Consensus
Delivery of Health Care
Electronic data interchange

A coordinated scheduling policy to improve patient access to surgical services

Martinez, G., Huschka, T., Sir, M. & Pasupathy, K. S., Jan 17 2017, 2016 Winter Simulation Conference: Simulating Complex Service Systems, WSC 2016. Institute of Electrical and Electronics Engineers Inc., p. 2041-2052 12 p. 7822248

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Scheduling Policy
Scheduling
Throughput
Simulation Model
Resources

Aligned-layer text search in clinical notes

Wu, S., Wen, A., Wang, Y., Liu, S. & Liu, H. D., Jan 1 2017, MEDINFO 2017: Precision Healthcare through Informatics - Proceedings of the 16th World Congress on Medical and Health Informatics. IOS Press, Vol. 245. p. 629-633 5 p. (Studies in Health Technology and Informatics; vol. 245).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Information retrieval
Natural Language Processing
Natural language processing systems
Information Storage and Retrieval
Health
1 Citation (Scopus)

Analysis of clinical variations in asthma care documented in electronic health records between staff and resident physicians

Sohn, S., Wi, C. I., Juhn, Y. J. & Liu, H. D., Jan 1 2017, MEDINFO 2017: Precision Healthcare through Informatics - Proceedings of the 16th World Congress on Medical and Health Informatics. IOS Press, Vol. 245. p. 1170-1174 5 p. (Studies in Health Technology and Informatics; vol. 245).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Electronic Health Records
Asthma
Health
Physicians
Documentation

Answering diabetic patients' questions using expert-vetted online resources: A case study

Zeng, Y., Liu, X., Wang, L., Liu, H. D. & Wang, Y., Jan 17 2017, Proceedings - 2016 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2016. Institute of Electrical and Electronics Engineers Inc., p. 525-528 4 p. 7822575

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Terminology
Medical problems
Processing
MedlinePlus
Unified Medical Language System
1 Citation (Scopus)

A preliminary comparison of three tourniquet instructions for just-in-time guidance of a simulated tourniquet application

Lowndes, B. R., Forsyth, K. L., Prytz, E., Johnson, C. O., Abdelrahman, A., Sztajnkrycer, M. D., Franz, W. B., Blocker, R. & Hallbeck, S., Jan 1 2017, Proceedings of the Human Factors and Ergonomics Society 2017 International Annual Meeting, HFES 2017. Human Factors an Ergonomics Society Inc., Vol. 2017-October. p. 1076-1080 5 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

instruction
National security
Homelands
layperson
time
1 Citation (Scopus)

Building an i2b2-based integrated data repository for cancer research: A case study of ovarian cancer registry

Hong, N., Li, Z., Kiefer, R. C., Robertson, M. S., Goode, E. L., Wang, C. & Jiang, G. D., 2017, Data Management and Analytics for Medicine and Healthcare - 2nd International Workshop, DMAH 2016 Held at VLDB 2016, Revised Selected Papers. Springer Verlag, Vol. 10186 LNCS. p. 121-135 15 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10186 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Codes (standards)
Ovarian Cancer
Repository
Cancer
Information management
1 Citation (Scopus)

Building interoperable FHIR-based vocabulary mapping services: A case study of OHDSI vocabularies and mappings

Jiang, G. D., Kiefer, R., Prud'hommeaux, E. & Solbrig, H. R., Jan 1 2017, MEDINFO 2017: Precision Healthcare through Informatics - Proceedings of the 16th World Congress on Medical and Health Informatics. IOS Press, Vol. 245. 1 p. (Studies in Health Technology and Informatics; vol. 245).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Vocabulary
Terminology
Data structures
Clinical Coding
8 Citations (Scopus)

Dependency and AMR embeddings for drug-drug interaction extraction from biomedical literature

Wang, Y., Wang, L., Liu, S., Shen, F., Liu, H. D., Rastegar-Mojarad, M. & Liu, F., Aug 20 2017, ACM-BCB 2017 - Proceedings of the 8th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics. Association for Computing Machinery, Inc, p. 36-43 8 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Drug interactions
Drug Interactions
Syntactics
Pharmaceutical Preparations
Support vector machines
2 Citations (Scopus)

Detecting drinking-related contents on social media by classifying heterogeneous data types

ElTayeby, O., Eaglin, T., Abdullah, M., Burlinson, D., Dou, W. & Yao, L., Jan 1 2017, Advances in Artificial Intelligence: From Theory to Practice - 30th International Conference on Industrial Engineering and Other Applications of Applied Intelligent Systems, IEA/AIE 2017, Proceedings. Ali, M., Benferhat, S. & Tabia, K. (eds.). Springer Verlag, p. 364-373 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10351 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Social Media
Public health
Medical problems
Support vector machines
Students
1 Citation (Scopus)

DIR-A semantic information resource for healthcare datasets

Shi, J., Zheng, M., Yao, L. & Ge, Y., Dec 15 2017, Proceedings - 2017 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2017. Yoo, I., Zheng, J. H., Gong, Y., Hu, X. T., Shyu, C-R., Bromberg, Y., Gao, J. & Korkin, D. (eds.). Institute of Electrical and Electronics Engineers Inc., Vol. 2017-January. p. 805-810 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Blogs
Semantic Web
Metadata
Semantics
Health

Do trauma activations affect interruptions in the emergency department?

Forsyth, K. L., Hawthorne, H. J., Linden, A. R., El-Sherif, N., Varghese, R. S., Hallbeck, S. & Blocker, R., Jan 1 2017, Proceedings of the Human Factors and Ergonomics Society 2017 International Annual Meeting, HFES 2017. Human Factors an Ergonomics Society Inc., Vol. 2017-October. p. 643-647 5 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

activation
trauma
Chemical activation
PC
1 Citation (Scopus)

Estimating disease burden using google trends and Wikipedia data

Qiu, R., Hadzikadic, M. & Yao, L., Jan 1 2017, Advances in Artificial Intelligence: From Theory to Practice - 30th International Conference on Industrial Engineering and Other Applications of Applied Intelligent Systems, IEA/AIE 2017, Proceedings. Ali, M., Benferhat, S. & Tabia, K. (eds.). Springer Verlag, p. 374-385 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10351 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Wikipedia
Health
Internet
Multiple Sclerosis
Diabetes Mellitus

Exploiting HPO to predict a ranked list of phenotype categories for livertox case reports

Overby, C. L., Raschid, L. & Liu, H. D., 2017, Data Management and Analytics for Medicine and Healthcare - 2nd International Workshop, DMAH 2016 Held at VLDB 2016, Revised Selected Papers. Springer Verlag, Vol. 10186 LNCS. p. 3-9 7 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10186 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Phenotype
Liver
Ontology
Drugs
Predict
2 Citations (Scopus)

Harnessing big data for precision medicine: Infrastructures and applications

Yu, K. H., Hart, S., Goldfeder, R., Zhang, Q. C., Parker, S. C. J. & Snyder, M., Jan 1 2017, PACIFIC SYMPOSIUM ON BIOCOMPUTING 2017. Altman, R. B., Murray, T., Klein, T. E., Dunker, A. K., Ritchie, M. D. & Hunter, L. (eds.). 212679 ed. World Scientific Publishing Co. Pte Ltd, p. 635-639 5 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Precision Medicine
Medicine
Health
Data Mining
Information Dissemination

Human factors applications to mitigate design limitations of a wearable telemedicine heart rate monitor

Lowndes, B., Finnie, D., Hathaway, J., Ridgeway, J., Vickers-Douglas, K., Bruce, C. J. & Hallbeck, S., Jan 1 2017, Frontiers in Biomedical Devices, BIOMED - 2017 Design of Medical Devices Conference, DMD 2017. American Society of Mechanical Engineers

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Telemedicine
Human engineering

Human factors in the wild: SOLUTIONS for mitigating the negative impact of interruptions in healthcare (Discussion Panel)

Xiao, Y., Rivera, A. J., Probst, C. A., Blocker, R., Wolf, L. & Kellogg, K. M., Jan 1 2017, Proceedings of the Human Factors and Ergonomics Society 2017 International Annual Meeting, HFES 2017. Human Factors an Ergonomics Society Inc., Vol. 2017-October. p. 630-634 5 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Human engineering
patient care
present
1 Citation (Scopus)

Identifying factors influencing patient alone time at the emergency department using RFID data: What is next?

Arunachalam, S. P., Sir, M., Marisamy, G., Sadosty, A., Nestler, D., Hellmich, T. & Pasupathy, K. S., Apr 11 2017, 2017 IEEE EMBS International Conference on Biomedical and Health Informatics, BHI 2017. Institute of Electrical and Electronics Engineers Inc., p. 225-228 4 p. 7897246

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Radio Frequency Identification Device
Radio frequency identification (RFID)
Hospital Emergency Service
Length of Stay
Costs
3 Citations (Scopus)

Identifying serendipitous drug usages in patient forum data a feasibility study

Ru, B., Warner-Hillard, C., Ge, Y. & Yao, L., Jan 1 2017, HEALTHINF 2017 - 10th International Conference on Health Informatics, Proceedings; Part of 10th International Joint Conference on Biomedical Engineering Systems and Technologies, BIOSTEC 2017. Gamboa, H., Fred, A., van den Broek, E. L. & Vaz, M. (eds.). SciTePress, Vol. 5. p. 106-118 13 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Adaptive boosting
Feasibility Studies
Drug Repositioning
Learning systems
Classifiers